7FJ3

Cryo-EM structure of PRV A-capid

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth 0], BA [auth a], DA [auth e], E [auth A], EA [auth f], A [auth 0], BA [auth a], DA [auth e], E [auth A], EA [auth f], FA [auth g], KA [auth l], LA [auth m], MA [auth n], OA [auth p], PA [auth q], TA [auth u], VA [auth w], W [auth S], XA [auth y], Y [auth U]	PF03122	Herpes virus major capsid protein (Herpes_MCP)	Herpes virus major capsid protein	-	Family
B [auth 1], C [auth 2], D [auth 3], IA [auth j], JA [auth k], B [auth 1], C [auth 2], D [auth 3], IA [auth j], JA [auth k], NA [auth o], RA [auth s], UA [auth v], WA [auth x], YA [auth z]	PF01802	Herpesvirus VP23 like capsid protein (Herpes_V23)	Herpesvirus VP23 like capsid protein	-	Family
AA [auth W], CA [auth d], F [auth B], G [auth C], GA [auth h], AA [auth W], CA [auth d], F [auth B], G [auth C], GA [auth h], H [auth D], HA [auth i], QA [auth r], SA [auth t], X [auth T]	PF03327	Herpesvirus capsid shell protein VP19C (Herpes_VP19C)	Herpesvirus capsid shell protein VP19C	-	Family
I [auth E], J [auth F], K [auth G], L [auth H], M [auth I], I [auth E], J [auth F], K [auth G], L [auth H], M [auth I], N [auth J], O [auth K], P [auth L], Q [auth M], R [auth N], S [auth O], T [auth P], U [auth Q], V [auth R], Z [auth V]	PF04496	Herpesvirus UL35 family (Herpes_UL35)	Herpesvirus UL35 family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth 0], BA [auth a], DA [auth e], E [auth A], EA [auth f], A [auth 0], BA [auth a], DA [auth e], E [auth A], EA [auth f], FA [auth g], KA [auth l], LA [auth m], MA [auth n], OA [auth p], PA [auth q], TA [auth u], VA [auth w], W [auth S], XA [auth y], Y [auth U]	Major capsid protein	structural molecule activity	-	host intracellular membrane-bounded organelle host cellular component host intracellular part host cell part host intracellular region cellular anatomical entity host cell nucleus host intracellular organelle viral capsid icosahedral viral capsid virion component T=16 icosahedral viral capsid
B [auth 1], C [auth 2], D [auth 3], IA [auth j], JA [auth k], B [auth 1], C [auth 2], D [auth 3], IA [auth j], JA [auth k], NA [auth o], RA [auth s], UA [auth v], WA [auth x], YA [auth z]	Triplex capsid protein 2	structural molecule activity	virion assembly viral process viral capsid assembly viral life cycle	viral capsid virion component host intracellular membrane-bounded organelle host cellular component host intracellular part host cell part host intracellular region cellular anatomical entity host cell nucleus host intracellular organelle
AA [auth W], CA [auth d], F [auth B], G [auth C], GA [auth h], AA [auth W], CA [auth d], F [auth B], G [auth C], GA [auth h], H [auth D], HA [auth i], QA [auth r], SA [auth t], X [auth T]	Triplex capsid protein 1	DNA binding binding organic cyclic compound binding nucleic acid binding	virion assembly viral process viral capsid assembly viral life cycle	viral capsid virion component host intracellular membrane-bounded organelle host cellular component host intracellular part host cell part host intracellular region cellular anatomical entity host cell nucleus host intracellular organelle
I [auth E], J [auth F], K [auth G], L [auth H], M [auth I], I [auth E], J [auth F], K [auth G], L [auth H], M [auth I], N [auth J], O [auth K], P [auth L], Q [auth M], R [auth N], S [auth O], T [auth P], U [auth Q], V [auth R], Z [auth V]	Small capsomere-interacting protein	-	viral process	viral capsid virion component host intracellular membrane-bounded organelle host cellular component host intracellular part host cell part host intracellular region cellular anatomical entity host cell nucleus host intracellular organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth 0], BA [auth a], DA [auth e], E [auth A], EA [auth f], A [auth 0], BA [auth a], DA [auth e], E [auth A], EA [auth f], FA [auth g], KA [auth l], LA [auth m], MA [auth n], OA [auth p], PA [auth q], TA [auth u], VA [auth w], W [auth S], XA [auth y], Y [auth U]	IPR000912	Herpesvirus major capsid protein	Family
A [auth 0], BA [auth a], DA [auth e], E [auth A], EA [auth f], A [auth 0], BA [auth a], DA [auth e], E [auth A], EA [auth f], FA [auth g], KA [auth l], LA [auth m], MA [auth n], OA [auth p], PA [auth q], TA [auth u], VA [auth w], W [auth S], XA [auth y], Y [auth U]	IPR023233	Herpesvirus major capsid protein, upper domain superfamily	Homologous Superfamily
B [auth 1], C [auth 2], D [auth 3], IA [auth j], JA [auth k], B [auth 1], C [auth 2], D [auth 3], IA [auth j], JA [auth k], NA [auth o], RA [auth s], UA [auth v], WA [auth x], YA [auth z]	IPR002690	Herpesvirus capsid protein 2	Family
AA [auth W], CA [auth d], F [auth B], G [auth C], GA [auth h], AA [auth W], CA [auth d], F [auth B], G [auth C], GA [auth h], H [auth D], HA [auth i], QA [auth r], SA [auth t], X [auth T]	IPR004999	Herpesvirus capsid shell protein 1	Family
I [auth E], J [auth F], K [auth G], L [auth H], M [auth I], I [auth E], J [auth F], K [auth G], L [auth H], M [auth I], N [auth J], O [auth K], P [auth L], Q [auth M], R [auth N], S [auth O], T [auth P], U [auth Q], V [auth R], Z [auth V]	IPR007584	Herpesvirus UL35	Family

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.