7DZ6

Crystal structures of D-allulose 3-epimerase with D-allulose from Sinorhizobium fredii


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.222 
  • R-Value Work: 0.177 
  • R-Value Observed: 0.180 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Structural basis and molecular modification of D-allulose 3-epimerase from Sinorhizobium fredii

Zhu, Z.L.Takuya, M.Masaru, T.Lu, F.P.Qin, H.-M.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
D-tagatose 3-epimeraseA, B, C, D286Sinorhizobium fredii CCBAU 83666Mutation(s): 0 
Gene Names: SF83666_b55120
EC: 5.1.3
UniProt
Find proteins for A0A249Q1V1 (Sinorhizobium fredii CCBAU 83666)
Explore A0A249Q1V1 
Go to UniProtKB:  A0A249Q1V1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A249Q1V1
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.222 
  • R-Value Work: 0.177 
  • R-Value Observed: 0.180 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 62.558α = 90
b = 87.141β = 99.387
c = 128.881γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
Aimlessdata scaling
PHASERphasing

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2022-08-03
    Type: Initial release