1CV2
Hydrolytic haloalkane dehalogenase linb from sphingomonas paucimobilis UT26 AT 1.6 A resolution
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1cv2a_ | Alpha and beta proteins (a/b) | alpha/beta-Hydrolases | alpha/beta-Hydrolases | Haloalkane dehalogenase | Haloalkane dehalogenase | (Sphingomonas paucimobilis ) [TaxId: 13689 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.1820 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Alpha/Beta hydrolase fold, catalytic domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00561 | alpha/beta hydrolase fold (Abhydrolase_1) | alpha/beta hydrolase fold | This catalytic domain is found in a very wide range of enzymes. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
HALOALKANE DEHALOGENASE |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000639 | Epoxide hydrolase-like | Family | |
IPR000073 | Alpha/beta hydrolase fold-1 | Domain | |
IPR023594 | Haloalkane dehalogenase, subfamily 2 | Family | |
IPR029058 | Alpha/Beta hydrolase fold | Homologous Superfamily |
Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage
Chains | Enzyme Name | Description | Catalytic Residues |
---|---|---|---|
haloalkane dehalogenase (subfamily 2) M-CSA #467 | The Haloalkane dehalogenase LinB, found in bacteria, catalyses the convertion of a broad range of natural and synthetic halogenated compounds (e.g., alkanes, alkenes, cycloalkanes, alcohols, epoxides, carboxylic acids, esters, ethers, amides, and nitriles) by replacing the halogen atom (chloro, bromo, or iodo) with a hydroxyl group. It is of special interest in its ability to degrade the toxic compound 1,2,3,4,5,6-hexachlorocyclohexane. Thus study of the enzyme is important in understanding how bacteria are able to degrade xenobiotics and how pollutants can be detoxified using microorganisms. The enzyme is part of the alpha-beta hydrolase family and shows sequence and structural homology with a wide variety of haloalkane dehalogenases with different specificities. | Defined by 5 residues: ASN:A-38ASP:A-108TRP:A-109GLU:A-132HIS:A-272 | EC: 3.8.1.5 (PDB Primary Data) |