3A6Z

Crystal structure of Pseudomonas sp. MIS38 lipase (PML) in the open conformation following dialysis against Ca-free buffer

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Peptidase_M10_C	e3a6zA2	A: beta duplicates or obligate multimers	X: Single-stranded right-handed beta-helix	H: Serralysin-like metalloprotease-C (From Topology)	T: Serralysin-like metalloprotease-C	F: Peptidase_M10_C	ECOD (1.6)
A	Peptidase_M10_C_like	e3a6zA3	A: beta duplicates or obligate multimers	X: Single-stranded right-handed beta-helix	H: Serralysin-like metalloprotease-C (From Topology)	T: Serralysin-like metalloprotease-C	F: Peptidase_M10_C_like	ECOD (1.6)
A	Lipase_3	e3a6zA1	A: a/b three-layered sandwiches	X: alpha/beta-Hydrolases (From Topology)	H: alpha/beta-Hydrolases (From Topology)	T: alpha/beta-Hydrolases	F: Lipase_3	ECOD (1.6)
B [auth C]	Peptidase_M10_C	e3a6zC3	A: beta duplicates or obligate multimers	X: Single-stranded right-handed beta-helix	H: Serralysin-like metalloprotease-C (From Topology)	T: Serralysin-like metalloprotease-C	F: Peptidase_M10_C	ECOD (1.6)
B [auth C]	Peptidase_M10_C_like	e3a6zC4	A: beta duplicates or obligate multimers	X: Single-stranded right-handed beta-helix	H: Serralysin-like metalloprotease-C (From Topology)	T: Serralysin-like metalloprotease-C	F: Peptidase_M10_C_like	ECOD (1.6)
B [auth C]	Lipase_3	e3a6zC2	A: a/b three-layered sandwiches	X: alpha/beta-Hydrolases (From Topology)	H: alpha/beta-Hydrolases (From Topology)	T: alpha/beta-Hydrolases	F: Lipase_3	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.50.1820	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Alpha/Beta hydrolase fold, catalytic domain	CATH (4.3.0)
B [auth C]	3.40.50.1820	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Alpha/Beta hydrolase fold, catalytic domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B [auth C]	PF00353	RTX calcium-binding nonapeptide repeat (4 copies) (HemolysinCabind)	RTX calcium-binding nonapeptide repeat (4 copies)	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B [auth C]	Lipase	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding	-	extracellular region cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B [auth C]	IPR050557	RTX toxin and mannuronan C5-epimerase	Family
A, B [auth C]	IPR018511	Hemolysin-type calcium-binding conserved site	Conserved Site
A, B [auth C]	IPR001343	RTX calcium-binding nonapeptide repeat	Repeat
A, B [auth C]	IPR011049	Serralysin-like metalloprotease, C-terminal	Homologous Superfamily
A, B [auth C]	IPR029058	Alpha/Beta hydrolase fold	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.