Annotations: 4CE4

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
O [auth I]	SCOP2 Family	Ribosomal protein L9 N-domain	8070578	4001757	SCOP2 (2022-06-29)
O [auth I]	SCOP2 Superfamily	L9 N-domain-like	8070579	3000338	SCOP2 (2022-06-29)
Q [auth O]	SCOP2 Family	Ribosomal protein L14	8072067	4001826	SCOP2 (2022-06-29)
Q [auth O]	SCOP2 Superfamily	50S Ribosomal protein L14-like	8072068	3000433	SCOP2 (2022-06-29)
R [auth P]	SCOP2 Family	Ribosomal proteins L15p and L18e	8089119	4003555	SCOP2 (2022-06-29)
R [auth P]	SCOP2 Superfamily	Ribosomal proteins L15p and L18e	8089120	3001045	SCOP2 (2022-06-29)
S [auth Q]	SCOP2 Family	Ribosomal protein L16p	8076054	4003717	SCOP2 (2022-06-29)
S [auth Q]	SCOP2 Superfamily	Ribosomal protein L16p/L10e	8076055	3000884	SCOP2 (2022-06-29)
V [auth T]	SCOP2 Family	Ribosomal protein L19	8089131	4001761	SCOP2 (2022-06-29)
V [auth T]	SCOP2 Superfamily	Translation proteins SH3-like KOW motif containing domain	8089132	3000334	SCOP2 (2022-06-29)
X [auth V]	SCOP2 Family	Ribosomal protein l21p	8082450	4001630	SCOP2 (2022-06-29)
X [auth V]	SCOP2 Superfamily	l21p-like	8082451	3002005	SCOP2 (2022-06-29)
Y [auth W]	SCOP2 Family	Ribosomal protein L22	8081521	4001212	SCOP2 (2022-06-29)
Y [auth W]	SCOP2 Superfamily	Ribosomal protein L22	8081522	3001078	SCOP2 (2022-06-29)
AA [auth Y]	SCOP2 Family	Ribosomal proteins L24p and L21e	8082518	4001752	SCOP2 (2022-06-29)
AA [auth Y]	SCOP2 Superfamily	Translation proteins SH3-like KOW motif containing domain	8082519	3000334	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth 0]	Ribosomal_L27	e4ce401	A: a+b complex topology	X: alpha/beta-Hammerhead/Barrel-sandwich hybrid	H: alpha/beta-Hammerhead/Barrel-sandwich hybrid	T: Ribosomal L27 protein	F: Ribosomal_L27	ECOD (1.6)
B [auth 1]	Ribosomal_L28_1	e4ce411	A: few secondary structure elements	X: Ribosomal protein bL28-related (From Homology)	H: Ribosomal protein bL28-related	T: Ribosomal protein L28	F: Ribosomal_L28_1	ECOD (1.6)
C [auth 2]	MRP-L47	e4ce421	A: alpha bundles	X: Long alpha-hairpin	H: Ribosomal protein L29 (L29p) (From Topology)	T: Ribosomal protein L29 (L29p)	F: MRP-L47	ECOD (1.6)
D [auth 3]	Ribosomal_L30	e4ce431	A: a+b two layers	X: Ribosomal protein L30p/L7e (From Topology)	H: Ribosomal protein L30p/L7e (From Topology)	T: Ribosomal protein L30p/L7e	F: Ribosomal_L30	ECOD (1.6)
E [auth 5]	Ribosomal_L32p	e4ce451	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_L32p	ECOD (1.6)
F [auth 6]	Ribosomal_L33	e4ce461	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_L33	ECOD (1.6)
G [auth 7]	Ribosomal_L34	e4ce471	A: extended segments	X: 50S ribosomal protein L34 (From Topology)	H: 50S ribosomal protein L34 (From Topology)	T: 50S ribosomal protein L34	F: Ribosomal_L34	ECOD (1.6)
H [auth 8]	Ribosomal_L35p	e4ce481	A: a+b two layers	X: Ribosomal protein L35p (From Topology)	H: Ribosomal protein L35p (From Topology)	T: Ribosomal protein L35p	F: Ribosomal_L35p	ECOD (1.6)
I [auth 9]	Ribosomal_L36	e4ce491	A: few secondary structure elements	X: Ribosomal protein L36 (From Topology)	H: Ribosomal protein L36 (From Topology)	T: Ribosomal protein L36	F: Ribosomal_L36	ECOD (1.6)
L [auth D]	Ribosomal_L2	e4ce4D1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_L2	ECOD (1.6)
L [auth D]	Ribosomal_L2_C	e4ce4D2	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L2_C	ECOD (1.6)
M [auth E]	Ribosomal_L3	e4ce4E1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: Ribosomal_L3	ECOD (1.6)
N [auth F]	Ribosomal_L4	e4ce4F1	A: a/b three-layered sandwiches	X: Ribosomal protein L4 (From Topology)	H: Ribosomal protein L4 (From Topology)	T: Ribosomal protein L4	F: Ribosomal_L4	ECOD (1.6)
O [auth I]	Ribosomal_L9_N_1	e4ce4I1	A: a+b two layers	X: L9 N-domain-like	H: L9 N-domain-like (From Topology)	T: L9 N-domain-like	F: Ribosomal_L9_N_1	ECOD (1.6)
P [auth N]	Ribosomal_L13	e4ce4N1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal protein L13 and L16-A (From Topology)	T: Ribosomal protein L13 and L16-A	F: Ribosomal_L13	ECOD (1.6)
Q [auth O]	Ribosomal_L14	e4ce4O1	A: beta barrels	X: Ribosomal protein L14-like	H: Ribosomal protein L14-related (From Topology)	T: Ribosomal protein L14-related	F: Ribosomal_L14	ECOD (1.6)
R [auth P]	Ribosomal_L27A	e4ce4P1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal proteins L15p and L18e (From Topology)	T: Ribosomal proteins L15p and L18e	F: Ribosomal_L27A	ECOD (1.6)
S [auth Q]	Ribosomal_L16	e4ce4Q1	A: a+b complex topology	X: alpha/beta-Hammerhead/Barrel-sandwich hybrid	H: alpha/beta-Hammerhead/Barrel-sandwich hybrid	T: Ribosomal protein L10e	F: Ribosomal_L16	ECOD (1.6)
T [auth R]	Ribosomal_L17	e4ce4R1	A: a+b two layers	X: Enolase-N/ribosomal protein	H: Prokaryotic ribosomal protein L17 (From Topology)	T: Prokaryotic ribosomal protein L17	F: Ribosomal_L17	ECOD (1.6)
U [auth S]	Ribosomal_L18p	e4ce4S1	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: Ribosomal_L18p	ECOD (1.6)
V [auth T]	Ribosomal_L19	e4ce4T1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L19	ECOD (1.6)
W [auth U]	Ribosomal_L20	e4ce4U1	A: alpha arrays	X: PABP domain-like	H: Ribosomal protein L20 (From Topology)	T: Ribosomal protein L20	F: Ribosomal_L20	ECOD (1.6)
X [auth V]	Ribosomal_L21p	e4ce4V1	A: beta barrels	X: Ribosomal protein L21p (From Topology)	H: Ribosomal protein L21p (From Topology)	T: Ribosomal protein L21p	F: Ribosomal_L21p	ECOD (1.6)
Y [auth W]	Ribosomal_L22	e4ce4W1	A: a+b two layers	X: Enolase-N/ribosomal protein	H: Ribosomal protein L22 (From Topology)	T: Ribosomal protein L22	F: Ribosomal_L22	ECOD (1.6)
Z [auth X]	Ribosomal_L23_2	e4ce4X1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal proteins S24e, L23 and L15e (From Topology)	T: Ribosomal proteins S24e, L23 and L15e	F: Ribosomal_L23_2	ECOD (1.6)
AA [auth Y]	ribosomal_L24_1	e4ce4Y1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: ribosomal_L24_1	ECOD (1.6)
BA [auth b]	PBP	e4ce4b1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: PEBP-like	F: PBP	ECOD (1.6)
CA [auth c]	TGS	e4ce4c2	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: TGS	ECOD (1.6)
CA [auth c]	tRNA_SAD	e4ce4c1	A: a+b two layers	X: LuxS, MPP, ThrRS/AlaRS common domain	H: LuxS, MPP, ThrRS/AlaRS common domain	T: ThrRS/AlaRS editing domain	F: tRNA_SAD	ECOD (1.6)
DA [auth h]	Ribonucleas_3_3	e4ce4h1	A: alpha arrays	X: RNase III catalytic domain-like (From Topology)	H: RNase III catalytic domain-like (From Topology)	T: RNase III catalytic domain-like	F: Ribonucleas_3_3	ECOD (1.6)
DA [auth h]	dsrm	e4ce4h2	A: a+b two layers	X: dsRBD-like	H: dsRNA-binding domain-like (From Topology)	T: dsRNA-binding domain-like	F: dsrm	ECOD (1.6)
EA [auth i]	Tim44	e4ce4i1	A: a+b two layers	X: Cystatin-like	H: NTF2-like (From Topology)	T: NTF2-like	F: Tim44	ECOD (1.6)
FA [auth l]	Img2	e4ce4l1	A: a+b two layers	X: Glucose permease domain IIB-like	H: eIF1-like (From Topology)	T: eIF1-like	F: Img2	ECOD (1.6)
HA [auth u]	RF-1_N	e4ce4u1	A: a+b two layers	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like (From Topology)	T: Peptidyl-tRNA hydrolase domain-like	F: RF-1_N	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
D [auth 3]	PF00327	Ribosomal protein L30p/L7e (Ribosomal_L30)	Ribosomal protein L30p/L7e	This family includes prokaryotic L30 and eukaryotic L7.	Domain
E [auth 5]	PF01783	Ribosomal L32p protein family (Ribosomal_L32p)	Ribosomal L32p protein family	-	Family
L [auth D]	PF00181	Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)	Ribosomal Proteins L2, RNA binding domain		Domain
O [auth I]	PF04280	Tim44-like domain (Tim44)	Tim44-like domain	Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostati ...	Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostatic interactions and by penetrating the polar head group region [1]. This family includes the C-terminal region of Tim44 that has been shown to form a stable proteolytic fragment in yeast. This region is also found in a set of smaller bacterial proteins. The molecular function of the bacterial members of this family is unknown but transport seems likely. The crystal structure of the C terminal of Tim44 has revealed a large hydrophobic pocket which might play an important role in interacting with the acyl chains of lipid molecules in the mitochondrial membrane [3].	Domain
O [auth I]	PF01281	Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)	Ribosomal protein L9, N-terminal domain		Domain
S [auth Q]	PF00252	Ribosomal protein L16p/L10e (Ribosomal_L16)	Ribosomal protein L16p/L10e		Domain
T [auth R]	PF01196	Ribosomal protein L17 (Ribosomal_L17)	Ribosomal protein L17	-	Family
V [auth T]	PF01245	Ribosomal protein L19 (Ribosomal_L19)	Ribosomal protein L19	-	Family
X [auth V]	PF00829	Ribosomal prokaryotic L21 protein (Ribosomal_L21p)	Ribosomal prokaryotic L21 protein	-	Family
Y [auth W]	PF00237	Ribosomal protein L22p/L17e (Ribosomal_L22)	Ribosomal protein L22p/L17e	This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.	Domain
Z [auth X]	PF00276	Ribosomal protein L23 (Ribosomal_L23)	Ribosomal protein L23	-	Family
AA [auth Y]	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)	Ribosomal proteins 50S L24/mitochondrial 39S L24	-	Family
AA [auth Y]	PF00467	KOW motif (KOW)	KOW motif	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth 0]	MRPL27	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
B [auth 1]	MRPL28	RNA binding binding rRNA binding 5S rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	rRNA import into mitochondrion RNA transport nitrogen compound transport transport nucleic acid transport mitochondrial transmembrane transport establishment of localization rRNA transport transmembrane transport localization import into the mitochondrion RNA import into mitochondrion establishment of RNA localization macromolecule localization rRNA import into mitochondrion RNA transport nitrogen compound transport transport nucleic acid transport mitochondrial transmembrane transport establishment of localization rRNA transport transmembrane transport localization import into the mitochondrion RNA import into mitochondrion establishment of RNA localization macromolecule localization cellular process RNA localization nucleobase-containing compound transport mitochondrial transport biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex
C [auth 2]	MRPL47	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
D [auth 3]	MRPL30	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit
E [auth 5]	MRPL32	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex intracellular membraneless organelle ribosomal subunit ribonucleoprotein complex membraneless organelle ribosome membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex intracellular membraneless organelle ribosomal subunit ribonucleoprotein complex membraneless organelle ribosome large ribosomal subunit
F [auth 6]	MRPL33	-	-	-
G [auth 7]	MRPL34	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
H [auth 8]	MRPL35	-	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome
I [auth 9]	MRPL36	-	-	-
J [auth A]	16S Ribosomal RNA	-	-	-
K [auth B]	UNASSIGNED RNA	-	-	-
L [auth D]	MRPL2	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure organelle intracellular membrane-bounded organelle membrane organelle membrane protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome
M [auth E]	MRPL3	-	-	-
N [auth F]	MRPL4	-	-	-
O [auth I]	MRPL9	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex
P [auth N]	MRPL13	-	-	-
Q [auth O]	MRPL14	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome
R [auth P]	MRPL15	-	-	-
S [auth Q]	MRPL16	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
T [auth R]	MRPL17	protein binding binding protein domain specific binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
U [auth S]	MRPL18	RNA binding binding rRNA binding 5S rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	rRNA import into mitochondrion RNA transport nitrogen compound transport transport nucleic acid transport mitochondrial transmembrane transport establishment of localization rRNA transport transmembrane transport localization import into the mitochondrion RNA import into mitochondrion establishment of RNA localization macromolecule localization rRNA import into mitochondrion RNA transport nitrogen compound transport transport nucleic acid transport mitochondrial transmembrane transport establishment of localization rRNA transport transmembrane transport localization import into the mitochondrion RNA import into mitochondrion establishment of RNA localization macromolecule localization cellular process RNA localization nucleobase-containing compound transport mitochondrial transport biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex
V [auth T]	MRPL19	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure organelle intracellular membrane-bounded organelle membrane organelle membrane protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome
W [auth U]	MRPL20	-	-	-
X [auth V]	MRPL21	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
Y [auth W]	MRPL22	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
Z [auth X]	MRPL23	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
AA [auth Y]	MRPL24	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle cellular anatomical structure organelle membrane organelle membrane protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit membrane-bounded organelle cellular anatomical structure organelle membrane organelle membrane protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen ribonucleoprotein complex cytoplasm
BA [auth b]	MRPL38	-	-	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex
CA [auth c]	MRPL39	binding nucleoside phosphate binding nucleotide binding heterocyclic compound binding small molecule binding	-	-
DA [auth h]	MRPL44	ribonuclease III activity double-stranded RNA-specific ribonuclease activity endonuclease activity RNA endonuclease activity, producing 5'-phosphomonoesters catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA nuclease activity hydrolase activity nuclease activity hydrolase activity, acting on ester bonds RNA endonuclease activity catalytic activity RNA binding double-stranded RNA binding ribonuclease III activity double-stranded RNA-specific ribonuclease activity endonuclease activity RNA endonuclease activity, producing 5'-phosphomonoesters catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA nuclease activity hydrolase activity nuclease activity hydrolase activity, acting on ester bonds RNA endonuclease activity catalytic activity RNA binding double-stranded RNA binding binding nucleic acid binding	RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process metabolic process cellular process RNA processing macromolecule metabolic process RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process metabolic process cellular process RNA processing macromolecule metabolic process mitochondrial translation mitochondrial gene expression translation translational elongation mitochondrial translational elongation protein metabolic process	cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm nucleus nuclear body nucleoplasm nuclear lumen
EA [auth i]	MRPL45	-	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome
FA [auth l]	MRPL49	RNA binding binding rRNA binding 5S rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	rRNA import into mitochondrion RNA transport nitrogen compound transport transport nucleic acid transport mitochondrial transmembrane transport establishment of localization rRNA transport transmembrane transport localization import into the mitochondrion RNA import into mitochondrion establishment of RNA localization macromolecule localization rRNA import into mitochondrion RNA transport nitrogen compound transport transport nucleic acid transport mitochondrial transmembrane transport establishment of localization rRNA transport transmembrane transport localization import into the mitochondrion RNA import into mitochondrion establishment of RNA localization macromolecule localization cellular process RNA localization nucleobase-containing compound transport mitochondrial transport biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex
GA [auth o]	MRPL52	-	-	-
HA [auth u]	ICT1	hydrolase activity, acting on ester bonds catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid carboxylic ester hydrolase activity hydrolase activity catalytic activity, acting on a tRNA peptidyl-tRNA hydrolase activity catalytic activity translation factor activity translation release factor activity, codon nonspecific translation release factor activity translation termination factor activity	cellular component disassembly protein-containing complex organization mitochondrial translation protein-containing complex disassembly primary metabolic process translation gene expression mitochondrial gene expression macromolecule biosynthetic process cellular component organization biosynthetic process mitochondrial translational termination cellular process metabolic process cellular component disassembly protein-containing complex organization mitochondrial translation protein-containing complex disassembly primary metabolic process translation gene expression mitochondrial gene expression macromolecule biosynthetic process cellular component organization biosynthetic process mitochondrial translational termination cellular process metabolic process translational termination cellular component organization or biogenesis protein metabolic process macromolecule metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
IA [auth v], JA [auth w]	UNASSIGNED HELICES	-	-	-
KA [auth x]	THIOREDOXIN FOLD	-	-	-
LA [auth z]	UNASSIGNED HELICES	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth 0]	IPR001684	Large ribosomal subunit protein bL27	Family
B [auth 1]	IPR005484	Large ribosomal subunit protein uL18	Family
B [auth 1]	IPR036967	Small ribosomal subunit protein uS11 superfamily	Homologous Superfamily
C [auth 2]	IPR038340	MRP-L47 superfamily, mitochondrial	Homologous Superfamily
C [auth 2]	IPR010729	Large ribosomal subunit protein uL29m, mitochondrial	Family
D [auth 3]	IPR036919	Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily	Homologous Superfamily
D [auth 3]	IPR005996	Large ribosomal subunit protein uL30, bacterial-type	Family
D [auth 3]	IPR016082	Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain	Domain
E [auth 5]	IPR002677	Large ribosomal subunit protein bL32	Family
E [auth 5]	IPR051991	Mitochondrial ribosomal protein bL32	Family
E [auth 5]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
G [auth 7]	IPR000271	Large ribosomal subunit protein bL34	Family
H [auth 8]	IPR019338	Large ribosomal subunit protein bL35m	Family
L [auth D]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
L [auth D]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
L [auth D]	IPR022666	Large ribosomal subunit protein uL2, RNA-binding domain	Domain
L [auth D]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
L [auth D]	IPR002171	Large ribosomal subunit protein uL2	Family
O [auth I]	IPR009027	Large ribosomal subunit protein bL9/RNase H1, N-terminal	Homologous Superfamily
O [auth I]	IPR036935	Large ribosomal subunit protein bL9, N-terminal domain superfamily	Homologous Superfamily
O [auth I]	IPR020070	Large ribosomal subunit protein bL9, N-terminal	Domain
O [auth I]	IPR054302	Large ribosomal subunit protein bL9m, C-terminal domain	Domain
O [auth I]	IPR000244	Large ribosomal subunit protein bL9	Family
Q [auth O]	IPR036853	Large ribosomal subunit protein uL14 superfamily	Homologous Superfamily
Q [auth O]	IPR000218	Large ribosomal subunit protein uL14	Family
S [auth Q]	IPR036920	Large ribosomal subunit protein uL16 superfamily	Homologous Superfamily
S [auth Q]	IPR000114	Large ribosomal subunit protein uL16, bacterial-type	Family
S [auth Q]	IPR016180	Large ribosomal subunit protein uL16 domain	Domain
S [auth Q]	IPR047873	Large ribosomal subunit protein uL16	Family
T [auth R]	IPR036373	Large ribosomal subunit protein bL17 superfamily	Homologous Superfamily
T [auth R]	IPR000456	Large ribosomal subunit protein bL17	Family
U [auth S]	IPR005484	Large ribosomal subunit protein uL18	Family
U [auth S]	IPR036967	Small ribosomal subunit protein uS11 superfamily	Homologous Superfamily
V [auth T]	IPR001857	Large ribosomal subunit protein bL19	Family
V [auth T]	IPR038657	Large ribosomal subunit protein bL19 superfamily	Homologous Superfamily
V [auth T]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
X [auth V]	IPR028909	Large ribosomal subunit protein bL21-like	Family
X [auth V]	IPR001787	Large ribosomal subunit protein bL21	Family
X [auth V]	IPR036164	Large ribosomal subunit protein bL21-like superfamily	Homologous Superfamily
Y [auth W]	IPR047867	Large ribosomal subunit protein uL22, bacterial/organelle-type	Family
Y [auth W]	IPR036394	Ribosomal protein uL22 superfamily	Homologous Superfamily
Y [auth W]	IPR001063	Large ribosomal subunit protein uL22	Family
Z [auth X]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
Z [auth X]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
Z [auth X]	IPR013025	Large ribosomal subunit protein uL23-like	Family
AA [auth Y]	IPR003256	Large ribosomal subunit protein uL24	Family
AA [auth Y]	IPR041988	Large ribosomal subunit protein uL24, KOW domain	Domain
AA [auth Y]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
AA [auth Y]	IPR005824	KOW	Domain
AA [auth Y]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
AA [auth Y]	IPR005825	Large ribosomal subunit protein uL24, conserved site	Conserved Site
BA [auth b]	IPR036610	PEBP-like superfamily	Homologous Superfamily
BA [auth b]	IPR008914	Phosphatidylethanolamine-binding protein	Family
BA [auth b]	IPR035810	Phosphatidylethanolamine-binding protein, eukaryotic	Family
CA [auth c]	IPR012676	TGS-like	Homologous Superfamily
CA [auth c]	IPR018163	Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily	Homologous Superfamily
CA [auth c]	IPR050062	Proline-tRNA synthetase	Family
CA [auth c]	IPR004095	TGS	Domain
CA [auth c]	IPR012675	Beta-grasp domain superfamily	Homologous Superfamily
DA [auth h]	IPR044444	Large ribosomal subunit protein mL44, dsRNA binding domain, metazoa	Domain
DA [auth h]	IPR055189	Large ribosomal subunit protein mL44, endonuclease domain	Domain
DA [auth h]	IPR014720	Double-stranded RNA-binding domain	Domain
DA [auth h]	IPR036389	Ribonuclease III, endonuclease domain superfamily	Homologous Superfamily
EA [auth i]	IPR032710	NTF2-like domain superfamily	Homologous Superfamily
EA [auth i]	IPR007379	Tim44-like domain	Domain
EA [auth i]	IPR051975	Mitochondrial Large Ribosomal Subunit mL45	Family
FA [auth l]	IPR005484	Large ribosomal subunit protein uL18	Family
FA [auth l]	IPR036967	Small ribosomal subunit protein uS11 superfamily	Homologous Superfamily
HA [auth u]	IPR000352	Peptide chain release factor class I	Domain
HA [auth u]	IPR052104	Mitochondrial Release Factor mL62	Family