Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd4n9ib2 All alpha proteins DNA/RNA-binding 3-helical bundle 'Winged helix' DNA-binding domain CAP C-terminal domain-like Catabolite gene activator protein (CAP), C-terminal domain (Escherichia coli ) [TaxId: 562 ], SCOPe (2.08)
Bd4n9ib1 All beta proteins Double-stranded beta-helix cAMP-binding domain-like cAMP-binding domain Catabolite gene activator protein, N-terminal domain (Escherichia coli ) [TaxId: 562 ], SCOPe (2.08)
Cd4n9ic2 All alpha proteins DNA/RNA-binding 3-helical bundle 'Winged helix' DNA-binding domain CAP C-terminal domain-like Catabolite gene activator protein (CAP), C-terminal domain (Escherichia coli ) [TaxId: 562 ], SCOPe (2.08)
Cd4n9ic1 All beta proteins Double-stranded beta-helix cAMP-binding domain-like cAMP-binding domain Catabolite gene activator protein, N-terminal domain (Escherichia coli ) [TaxId: 562 ], SCOPe (2.08)
Dd4n9id2 All alpha proteins DNA/RNA-binding 3-helical bundle 'Winged helix' DNA-binding domain CAP C-terminal domain-like Catabolite gene activator protein (CAP), C-terminal domain (Escherichia coli ) [TaxId: 562 ], SCOPe (2.08)
Dd4n9id1 All beta proteins Double-stranded beta-helix cAMP-binding domain-like cAMP-binding domain Catabolite gene activator protein, N-terminal domain (Escherichia coli ) [TaxId: 562 ], SCOPe (2.08)
Ad4n9ia2 All alpha proteins DNA/RNA-binding 3-helical bundle 'Winged helix' DNA-binding domain CAP C-terminal domain-like Catabolite gene activator protein (CAP), C-terminal domain (Escherichia coli ) [TaxId: 562 ], SCOPe (2.08)
Ad4n9ia1 All beta proteins Double-stranded beta-helix cAMP-binding domain-like cAMP-binding domain Catabolite gene activator protein, N-terminal domain (Escherichia coli ) [TaxId: 562 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BcNMP_bindinge4n9iB1 A: beta sandwichesX: jelly-rollH: Double-stranded beta-helix (From Topology)T: Double-stranded beta-helixF: cNMP_bindingECOD (1.6)
BCrpe4n9iB2 A: alpha arraysX: HTHH: HTHT: wingedF: CrpECOD (1.6)
CcNMP_bindinge4n9iC1 A: beta sandwichesX: jelly-rollH: Double-stranded beta-helix (From Topology)T: Double-stranded beta-helixF: cNMP_bindingECOD (1.6)
CCrpe4n9iC2 A: alpha arraysX: HTHH: HTHT: wingedF: CrpECOD (1.6)
DcNMP_bindinge4n9iD1 A: beta sandwichesX: jelly-rollH: Double-stranded beta-helix (From Topology)T: Double-stranded beta-helixF: cNMP_bindingECOD (1.6)
DCrpe4n9iD2 A: alpha arraysX: HTHH: HTHT: wingedF: CrpECOD (1.6)
AcNMP_bindinge4n9iA1 A: beta sandwichesX: jelly-rollH: Double-stranded beta-helix (From Topology)T: Double-stranded beta-helixF: cNMP_bindingECOD (1.6)
ACrpe4n9iA2 A: alpha arraysX: HTHH: HTHT: wingedF: CrpECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

AMR Gene: CARD Annotation CARD Database Homepage

ChainsAccessionShort NameDescriptionProvenance Source (Version)
A, B, C, D
ARO:3000518CRPCRP is a global regulator that represses MdtEF multidrug efflux pump expression.CARD (3.3.0)

AMR Gene Family: CARD Annotation CARD Database Homepage

ChainsAccessionGene FamilyDrug Class Resistance MachanismProvenance Source (Version)
A, B, C, D
ARO:0010004resistance-nodulation-cell division (RND) antibiotic efflux pumpmacrolide antibiotic, fluoroquinolone antibiotic, penamantibiotic effluxCARD (3.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF13545Crp-like helix-turn-helix domain (HTH_Crp_2)Crp-like helix-turn-helix domainThis family represents a crp-like helix-turn-helix domain that is likely to bind DNA.Domain
A, B, C, D
PF00027Cyclic nucleotide-binding domain (cNMP_binding)Cyclic nucleotide-binding domainThis domain sensor domain can bind cAMP, cGMP, c-di-GMP, oxygen and 2-oxoglutarate (Matilla et. al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1. https://doi.org/10.1093/femsre/fuab043).Domain