4R7T
Crystal structure of glucosamine-6-phosphate deaminase from Vibrio cholerae
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d4r7tb_ | Alpha and beta proteins (a/b) | NagB/RpiA/CoA transferase-like | NagB/RpiA/CoA transferase-like | NagB-like | automated matches | (Vibrio cholerae O1 biovar El Tor str. N16961 ) [TaxId: 243277 ], | SCOPe (2.08) |
A | d4r7ta_ | Alpha and beta proteins (a/b) | NagB/RpiA/CoA transferase-like | NagB/RpiA/CoA transferase-like | NagB-like | automated matches | (Vibrio cholerae O1 biovar El Tor str. N16961 ) [TaxId: 243277 ], | SCOPe (2.08) |
C | d4r7tc_ | Alpha and beta proteins (a/b) | NagB/RpiA/CoA transferase-like | NagB/RpiA/CoA transferase-like | NagB-like | automated matches | (Vibrio cholerae O1 biovar El Tor str. N16961 ) [TaxId: 243277 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | NagB/RpiA/CoA transferase-like | 8074888 | 3000693 | SCOP2B (2022-06-29) |
A | SCOP2 Family | NagB-like | 8074887 | 4003912 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | NagB/RpiA/CoA transferase-like | 8074888 | 3000693 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | NagB/RpiA/CoA transferase-like | 8074888 | 3000693 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | Glucosamine_iso | e4r7tB1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NagB/RpiA/CoA transferase-like | F: Glucosamine_iso | ECOD (1.6) |
A | Glucosamine_iso | e4r7tA1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NagB/RpiA/CoA transferase-like | F: Glucosamine_iso | ECOD (1.6) |
C | Glucosamine_iso | e4r7tC1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NagB/RpiA/CoA transferase-like | F: Glucosamine_iso | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.40.50.1360 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
A | 3.40.50.1360 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
C | 3.40.50.1360 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01182 | Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase (Glucosamine_iso) | Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR006148 | Glucosamine/galactosamine-6-phosphate isomerase | Domain | |
IPR004547 | Glucosamine-6-phosphate isomerase | Family | |
IPR018321 | Glucosamine-6-phosphate isomerase, conserved site | Conserved Site | |
IPR037171 | NagB/RpiA transferase-like | Homologous Superfamily |