4WWH
CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN (IPR025997) FROM MYCOBACTERIUM SMEGMATIS (MSMEG_1704, TARGET EFI-510967) WITH BOUND D-GALACTOSE
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4wwha_ | Alpha and beta proteins (a/b) | Periplasmic binding protein-like I | Periplasmic binding protein-like I | automated matches | automated matches | (Mycolicibacterium smegmatis MC2 155 ) [TaxId: 246196 ], | SCOPe (2.08) |
B | d4wwhb_ | Alpha and beta proteins (a/b) | Periplasmic binding protein-like I | Periplasmic binding protein-like I | automated matches | automated matches | (Mycolicibacterium smegmatis MC2 155 ) [TaxId: 246196 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Type 1 solute binding protein-like | 8096988 | 3000125 | SCOP2B (2022-06-29) |
B | SCOP2 Family | L-arabinose binding protein-like | 8096987 | 4000206 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Type 1 solute binding protein-like | 8096988 | 3000125 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Peripla_BP_4_C | e4wwhA1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Periplasmic binding protein-like I | F: Peripla_BP_4_C | ECOD (1.6) |
B | Peripla_BP_4_C | e4wwhB1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Periplasmic binding protein-like I | F: Peripla_BP_4_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.2300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Response regulator | CATH (4.3.0) |
B | 3.40.50.2300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Response regulator | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13407 | Periplasmic binding protein domain (Peripla_BP_4) | Periplasmic binding protein domain | - | Family |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR049784 | Multiple sugar-binding periplasmic receptor ChvE-like | Family | |
IPR025997 | Periplasmic binding protein | Domain | |
IPR028082 | Periplasmic binding protein-like I | Homologous Superfamily | |
IPR050555 | Bacterial Solute-Binding Protein 2 | Family |