5OKB
High resolution structure of native Gan1D, a putative 6-phospho-beta-galactosidase from Geobacillus stearothermophilus
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D | d5okbd_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | (Trans)glycosidases | automated matches | automated matches | (Geobacillus stearothermophilus ) [TaxId: 1422 ], | SCOPe (2.08) |
A | d5okba_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | (Trans)glycosidases | automated matches | automated matches | (Geobacillus stearothermophilus ) [TaxId: 1422 ], | SCOPe (2.08) |
B | d5okbb_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | (Trans)glycosidases | automated matches | automated matches | (Geobacillus stearothermophilus ) [TaxId: 1422 ], | SCOPe (2.08) |
C | d5okbc_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | (Trans)glycosidases | automated matches | automated matches | (Geobacillus stearothermophilus ) [TaxId: 1422 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
D | SCOP2B Superfamily | (Trans)glycosidases | 8065788 | 3000313 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | (Trans)glycosidases | 8065788 | 3000313 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | (Trans)glycosidases | 8065788 | 3000313 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | (Trans)glycosidases | 8065788 | 3000313 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D | Glyco_hydro_1 | e5okbD1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_1 | ECOD (1.6) |
A | Glyco_hydro_1 | e5okbA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_1 | ECOD (1.6) |
B | Glyco_hydro_1 | e5okbB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_1 | ECOD (1.6) |
C | Glyco_hydro_1 | e5okbC1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
D | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
A | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
B | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
C | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Putative 6-phospho-beta-galactobiosidase | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001360 | Glycoside hydrolase family 1 | Family | |
IPR018120 | Glycoside hydrolase family 1, active site | Active Site | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR033132 | Glycosyl hydrolases family 1, N-terminal conserved site | Conserved Site |