Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AUbiD_2nde6evfA1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: UbiD_2ndECOD (1.6)
AUbiD_3rde6evfA2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: UbiD C-terminal domain-like (From Topology)T: UbiD C-terminal domain-likeF: UbiD_3rdECOD (1.6)
AUbiD_1ste6evfA3 A: a+b two layersX: N-terminal subdomain in UbiD middle domain (From Topology)H: N-terminal subdomain in UbiD middle domain (From Topology)T: N-terminal subdomain in UbiD middle domainF: UbiD_1stECOD (1.6)
BUbiD_2nde6evfB3 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: UbiD_2ndECOD (1.6)
BUbiD_3rde6evfB2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: UbiD C-terminal domain-like (From Topology)T: UbiD C-terminal domain-likeF: UbiD_3rdECOD (1.6)
BUbiD_1ste6evfB1 A: a+b two layersX: N-terminal subdomain in UbiD middle domain (From Topology)H: N-terminal subdomain in UbiD middle domain (From Topology)T: N-terminal subdomain in UbiD middle domainF: UbiD_1stECOD (1.6)
DUbiD_2nde6evfD2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: UbiD_2ndECOD (1.6)
DUbiD_3rde6evfD1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: UbiD C-terminal domain-like (From Topology)T: UbiD C-terminal domain-likeF: UbiD_3rdECOD (1.6)
DUbiD_1ste6evfD3 A: a+b two layersX: N-terminal subdomain in UbiD middle domain (From Topology)H: N-terminal subdomain in UbiD middle domain (From Topology)T: N-terminal subdomain in UbiD middle domainF: UbiD_1stECOD (1.6)
CUbiD_2nde6evfC1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: UbiD_2ndECOD (1.6)
CUbiD_3rde6evfC2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: UbiD C-terminal domain-like (From Topology)T: UbiD C-terminal domain-likeF: UbiD_3rdECOD (1.6)
CUbiD_1ste6evfC3 A: a+b two layersX: N-terminal subdomain in UbiD middle domain (From Topology)H: N-terminal subdomain in UbiD middle domain (From Topology)T: N-terminal subdomain in UbiD middle domainF: UbiD_1stECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF206953-octaprenyl-4-hydroxybenzoate carboxy-lyase N-terminal domain (UbiD_N)3-octaprenyl-4-hydroxybenzoate carboxy-lyase N-terminal domainThis family has been characterised as 3-octaprenyl-4- hydroxybenzoate carboxy-lyase enzymes [1]. This enzyme catalyses the third reaction in ubiquinone biosynthesis. For optimal activity the carboxy-lase was shown to require Mn2+ [1]. This entry repr ...This family has been characterised as 3-octaprenyl-4- hydroxybenzoate carboxy-lyase enzymes [1]. This enzyme catalyses the third reaction in ubiquinone biosynthesis. For optimal activity the carboxy-lase was shown to require Mn2+ [1]. This entry represents the N-terminal domain.
Domain
A, B, C, D
PF019773-octaprenyl-4-hydroxybenzoate carboxy-lyase Rift-related domain (UbiD)3-octaprenyl-4-hydroxybenzoate carboxy-lyase Rift-related domainThis family has been characterised as 3-octaprenyl-4- hydroxybenzoate carboxy-lyase enzymes [1]. This enzyme catalyses the third reaction in ubiquinone biosynthesis. For optimal activity the carboxy-lase was shown to require Mn2+ [1]. This entry repr ...This family has been characterised as 3-octaprenyl-4- hydroxybenzoate carboxy-lyase enzymes [1]. This enzyme catalyses the third reaction in ubiquinone biosynthesis. For optimal activity the carboxy-lase was shown to require Mn2+ [1]. This entry represents the central RIFT-related domain.
Domain
A, B, C, D
PF206963-octaprenyl-4-hydroxybenzoate carboxy-lyase C-terminal domain (UbiD_C)3-octaprenyl-4-hydroxybenzoate carboxy-lyase C-terminal domainThis family has been characterised as 3-octaprenyl-4- hydroxybenzoate carboxy-lyase enzymes [1]. This enzyme catalyses the third reaction in ubiquinone biosynthesis. For optimal activity the carboxy-lase was shown to require Mn2+ [1]. This entry repr ...This family has been characterised as 3-octaprenyl-4- hydroxybenzoate carboxy-lyase enzymes [1]. This enzyme catalyses the third reaction in ubiquinone biosynthesis. For optimal activity the carboxy-lase was shown to require Mn2+ [1]. This entry represents the C-terminal domain.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Ferulic acid decarboxylase 1