8I7R | pdb_00008i7r

In situ structure of axonemal doublet microtubules in mouse sperm with 48-nm repeat


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
R [auth B]
PF13868Trichohyalin-plectin-homology domain (TPH)Trichohyalin-plectin-homology domain- Coiled-coil
A,
R [auth B]
PF15104Cilia- and flagella-associated protein 141 (CFAP141)Cilia- and flagella-associated protein 141- Family
B [auth A1],
C [auth A2],
D [auth A3],
E [auth A4]
PF03148Tektin family (Tektin)Tektin family- Family
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...Domain
PF03953Tubulin C-terminal domain (Tubulin_C)Tubulin C-terminal domainThis family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ...Domain
PF03148Tektin family (Tektin)Tektin family- Family
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...Domain
PF03953Tubulin C-terminal domain (Tubulin_C)Tubulin C-terminal domainThis family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ...Domain
PF03148Tektin family (Tektin)Tektin family- Family
PF03148Tektin family (Tektin)Tektin family- Family
NA [auth C],
NB [auth D]
PF00334Nucleoside diphosphate kinase (NDK)Nucleoside diphosphate kinaseDomain
PF03148Tektin family (Tektin)Tektin family- Family
BD [auth F],
KC [auth E]
PF13499EF-hand domain pair (EF-hand_7)EF-hand domain pairDomain
DF [auth H],
KE [auth G]
PF13868Trichohyalin-plectin-homology domain (TPH)Trichohyalin-plectin-homology domain- Coiled-coil
LE [auth G1],
ME [auth G2],
NE [auth G3]
PF06565DM10 domain (DM10_dom)DM10 domainThis entry represents the DM10 domain, which consists of approximately 105 residues whose function is unknown. It has been identified in nucleoside diphosphate kinases, namely Nucleoside diphosphate kinase 7 (NDK7), which contain a single copy of the ...Domain
OE [auth G4],
PE [auth G5],
QE [auth G6]
PF06565DM10 domain (DM10_dom)DM10 domainThis entry represents the DM10 domain, which consists of approximately 105 residues whose function is unknown. It has been identified in nucleoside diphosphate kinases, namely Nucleoside diphosphate kinase 7 (NDK7), which contain a single copy of the ...Domain
OG [auth J1],
PG [auth J2],
QG [auth J3]
PF00782Dual specificity phosphatase, catalytic domain (DSPc)Dual specificity phosphatase, catalytic domainSer/Thr and Tyr protein phosphatases. The enzyme's tertiary fold is highly similar to that of tyrosine-specific phosphatases, except for a "recognition" region [2]. Domain
EH [auth K1],
FH [auth K2],
GH [auth K3],
HH [auth K4],
IH [auth K5]
PF03148Tektin family (Tektin)Tektin family- Family
WH [auth L1],
XH [auth L2],
YH [auth L3],
ZH [auth L4]
PF13864Calmodulin-binding (Enkurin)Calmodulin-binding- Family
CJ [auth N]PF14892Piercer of microtubule wall 1/2 (PIRC1_2)Piercer of microtubule wall 1/2- Family
AL [auth Q],
JK [auth P],
QL [auth R],
TJ [auth O]
PF05914RIB43A (RIB43A)RIB43A- Family
KK [auth P1],
LK [auth P2],
MK [auth P3]
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
HN [auth U],
HO [auth W],
UN [auth V],
UO [auth X]
PF13868Trichohyalin-plectin-homology domain (TPH)Trichohyalin-plectin-homology domain- Coiled-coil
PF05018CFA20 domain (CFA20_dom)CFA20 domainThis domain is characteristic of cilia- and flagella-associated protein 20 (CFA20). CFA20 is a cilium- and flagellum-specific protein that plays a role in axonemal structure organisation and motility [1,2]. In Chlamydomonas reinhardtii, it stabilises ...Domain
GQ [auth Z],
IP [auth Y]
PF13868Trichohyalin-plectin-homology domain (TPH)Trichohyalin-plectin-homology domain- Coiled-coil
LC [auth E1],
MC [auth E2],
NC [auth E3],
OC [auth E4]
PF15041Tektin bundle interacting protein 1 (TKTI1)Tektin bundle interacting protein 1- Family
PF03148Tektin family (Tektin)Tektin family- Family
PF10629Ciliary microtubule inner protein 2B-like (CMI2B-like)Ciliary microtubule inner protein 2B-likeThis family represents a domain found in human Ciliary microtubule inner protein 2B (CMI2B) and similar proteins from eukaryotes. CMI2B is a microtubule inner proteins (MIP) that form part of the dynein-decorated doublet microtubules (DMTs) in cilia ...Domain
BL [auth Q1],
CL [auth Q2],
DL [auth Q3]
PF13499EF-hand domain pair (EF-hand_7)EF-hand domain pairDomain
PF10274Parkin co-regulated protein (ParcG)Parkin co-regulated protein- Repeat
PF15120Sperm acrosome-associated protein 9 (SPACA9)Sperm acrosome-associated protein 9- Family
PF03148Tektin family (Tektin)Tektin family- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
R [auth B]
Meiosis-specific nuclear structural protein 1
B [auth A1],
C [auth A2],
D [auth A3],
E [auth A4]
Tektin-1-
Tubulin beta-4B chain
Detyrosinated tubulin alpha-3 chain
Tektin-2-
NA [auth C],
NB [auth D]
Nucleoside diphosphate kinase 7
Tektin-4-
BD [auth F],
KC [auth E]
EF-hand domain-containing family member B
DF [auth H],
KE [auth G]
Cilia- and flagella-associated protein 53-
LE [auth G1],
ME [auth G2],
NE [auth G3]
EF-hand domain-containing protein 1
OE [auth G4],
PE [auth G5],
QE [auth G6]
EF-hand domain-containing family member C2-
WF [auth I]Cilia- and flagella-associated protein 95-
NG [auth J]Cilia- and flagella-associated protein 107-
OG [auth J1],
PG [auth J2],
QG [auth J3]
Dual specificity phosphatase 21
DH [auth K],
VH [auth L]
Cilia- and flagella-associated protein 161-
EH [auth K1],
FH [auth K2],
GH [auth K3],
HH [auth K4],
IH [auth K5]
Coiled-coil domain-containing protein 105-
WH [auth L1],
XH [auth L2],
YH [auth L3],
ZH [auth L4]
Enkurin
MI [auth M]Piercer of microtubule wall 1 protein-
NI [auth M1],
OI [auth M2],
PI [auth M3]
Testis-expressed protein 43-
CJ [auth N]Piercer of microtubule wall 2 protein-
DJ [auth N1],
EJ [auth N2],
FJ [auth N3],
GJ [auth N4]
Cilia- and flagella-associated protein 276-
AL [auth Q],
JK [auth P],
QL [auth R],
TJ [auth O]
RIB43A-like with coiled-coils protein 2-
UJ [auth O1],
VJ [auth O2],
WJ [auth O3]
Protein Flattop-
KK [auth P1],
LK [auth P2],
MK [auth P3]
Cilia- and flagella-associated protein 52-
GM [auth S],
TM [auth T]
Sperm-associated antigen 8
HN [auth U],
HO [auth W],
UN [auth V],
UO [auth X]
Cilia- and flagella-associated protein 45
Cilia- and flagella-associated protein 20-
GQ [auth Z],
IP [auth Y]
Cilia- and flagella-associated protein 210-
HQ [auth a]Cilia- and flagella-associated protein 141-
LC [auth E1],
MC [auth E2],
NC [auth E3],
OC [auth E4]
Tektin bundle-interacting protein 1-
Tektin-5-
Protein FAM166A-
XF [auth I1],
YF [auth I2],
ZF [auth I3]
Protein FAM166C-
BL [auth Q1],
CL [auth Q2],
DL [auth Q3]
EF-hand calcium-binding domain-containing protein 6
RL [auth R1],
SL [auth R2],
TL [auth R3]
Cilia and flagella-associated protein 77-
Parkin coregulated gene protein homolog
Sperm acrosome-associated protein 9
Tektin-3-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
R [auth B]
IPR043597Trichohyalin-plectin-homology domainDomain
A,
R [auth B]
IPR026504Meiosis-specific nuclear structural protein 1Family
B [auth A1],
C [auth A2],
D [auth A3],
E [auth A4]
IPR000435TektinsFamily
B [auth A1],
C [auth A2],
D [auth A3],
E [auth A4]
IPR048256Tektin-likeFamily
IPR003008Tubulin/FtsZ, GTPase domainDomain
IPR008280Tubulin/FtsZ, C-terminalHomologous Superfamily
IPR037103Tubulin/FtsZ-like, C-terminal domainHomologous Superfamily
IPR017975Tubulin, conserved siteConserved Site
IPR000217TubulinFamily
IPR023123Tubulin, C-terminalHomologous Superfamily
IPR002453Beta tubulinFamily
IPR013838Beta tubulin, autoregulation binding siteBinding Site
IPR018316Tubulin/FtsZ, 2-layer sandwich domainDomain
IPR036525Tubulin/FtsZ, GTPase domain superfamilyHomologous Superfamily
IPR003008Tubulin/FtsZ, GTPase domainDomain
IPR008280Tubulin/FtsZ, C-terminalHomologous Superfamily
IPR037103Tubulin/FtsZ-like, C-terminal domainHomologous Superfamily
IPR017975Tubulin, conserved siteConserved Site
IPR002452Alpha tubulinFamily
IPR000217TubulinFamily
IPR023123Tubulin, C-terminalHomologous Superfamily
IPR018316Tubulin/FtsZ, 2-layer sandwich domainDomain
IPR036525Tubulin/FtsZ, GTPase domain superfamilyHomologous Superfamily
IPR000435TektinsFamily
IPR048256Tektin-likeFamily
NA [auth C],
NB [auth D]
IPR035525NDPK7, first NDPk domainDomain
NA [auth C],
NB [auth D]
IPR011410Nucleoside diphosphate kinase 7Family
NA [auth C],
NB [auth D]
IPR034907Nucleoside diphosphate kinase-like domainDomain
NA [auth C],
NB [auth D]
IPR037993NDPK7, second NDPk domainDomain
NA [auth C],
NB [auth D]
IPR006602DM10 domainDomain
NA [auth C],
NB [auth D]
IPR036850Nucleoside diphosphate kinase-like domain superfamilyHomologous Superfamily
NA [auth C],
NB [auth D]
IPR001564Nucleoside diphosphate kinaseFamily
IPR000435TektinsFamily
IPR048256Tektin-likeFamily
BD [auth F],
KC [auth E]
IPR018247EF-Hand 1, calcium-binding siteBinding Site
BD [auth F],
KC [auth E]
IPR002048EF-hand domainDomain
BD [auth F],
KC [auth E]
IPR011992EF-hand domain pairHomologous Superfamily
BD [auth F],
KC [auth E]
IPR040193EF-hand domain-containing protein EFHC1/EFHC2/EFHBFamily
DF [auth H],
KE [auth G]
IPR043596CFAP53/TCHPFamily
DF [auth H],
KE [auth G]
IPR043597Trichohyalin-plectin-homology domainDomain
LE [auth G1],
ME [auth G2],
NE [auth G3]
IPR006602DM10 domainDomain
LE [auth G1],
ME [auth G2],
NE [auth G3]
IPR002048EF-hand domainDomain
LE [auth G1],
ME [auth G2],
NE [auth G3]
IPR011992EF-hand domain pairHomologous Superfamily
LE [auth G1],
ME [auth G2],
NE [auth G3]
IPR040193EF-hand domain-containing protein EFHC1/EFHC2/EFHBFamily
OE [auth G4],
PE [auth G5],
QE [auth G6]
IPR006602DM10 domainDomain
OE [auth G4],
PE [auth G5],
QE [auth G6]
IPR011992EF-hand domain pairHomologous Superfamily
OE [auth G4],
PE [auth G5],
QE [auth G6]
IPR040193EF-hand domain-containing protein EFHC1/EFHC2/EFHBFamily
WF [auth I]IPR027905Cilia- and flagella-associated protein 95Family
NG [auth J]IPR054709Cilia- and flagella-associated protein 107Family
NG [auth J]IPR037662Cilia- and flagella-associated protein 68/107Family
OG [auth J1],
PG [auth J2],
QG [auth J3]
IPR000340Dual specificity phosphatase, catalytic domainDomain
OG [auth J1],
PG [auth J2],
QG [auth J3]
IPR016130Protein-tyrosine phosphatase, active siteActive Site
OG [auth J1],
PG [auth J2],
QG [auth J3]
IPR029021Protein-tyrosine phosphatase-likeHomologous Superfamily
OG [auth J1],
PG [auth J2],
QG [auth J3]
IPR000387Tyrosine-specific protein phosphatases domainDomain
OG [auth J1],
PG [auth J2],
QG [auth J3]
IPR020420Atypical dual specificity phosphatase, subfamily BFamily
OG [auth J1],
PG [auth J2],
QG [auth J3]
IPR020422Dual specificity protein phosphatase domainDomain
DH [auth K],
VH [auth L]
IPR036300Mir domain superfamilyHomologous Superfamily
DH [auth K],
VH [auth L]
IPR055325Cilia- and flagella-associated protein 161Family
EH [auth K1],
FH [auth K2],
GH [auth K3],
HH [auth K4],
IH [auth K5]
IPR038949Tektin-like protein 1Family
EH [auth K1],
FH [auth K2],
GH [auth K3],
HH [auth K4],
IH [auth K5]
IPR048256Tektin-likeFamily
WH [auth L1],
XH [auth L2],
YH [auth L3],
ZH [auth L4]
IPR027012Enkurin domainDomain
WH [auth L1],
XH [auth L2],
YH [auth L3],
ZH [auth L4]
IPR052102Enkurin domain-containing proteinFamily
MI [auth M]IPR026507Piercer of microtubule wall 1/2Family
NI [auth M1],
OI [auth M2],
PI [auth M3]
IPR027965Sperm-associated microtubule inner protein 10Family
CJ [auth N]IPR026507Piercer of microtubule wall 1/2Family
DJ [auth N1],
EJ [auth N2],
FJ [auth N3],
GJ [auth N4]
IPR022179Cilia- and flagella-associated protein 276Family
AL [auth Q],
JK [auth P],
QL [auth R],
TJ [auth O]
IPR008805RIB43AFamily
UJ [auth O1],
VJ [auth O2],
WJ [auth O3]
IPR038797Protein FlattopFamily
KK [auth P1],
LK [auth P2],
MK [auth P3]
IPR019775WD40 repeat, conserved siteConserved Site
KK [auth P1],
LK [auth P2],
MK [auth P3]
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
KK [auth P1],
LK [auth P2],
MK [auth P3]
IPR001680WD40 repeatRepeat
KK [auth P1],
LK [auth P2],
MK [auth P3]
IPR050630WD repeat Echinoderm Microtubule-associated Protein-likeFamily
KK [auth P1],
LK [auth P2],
MK [auth P3]
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
GM [auth S],
TM [auth T]
IPR026124Sperm-associated antigen 8Family
HN [auth U],
HO [auth W],
UN [auth V],
UO [auth X]
IPR043597Trichohyalin-plectin-homology domainDomain
HN [auth U],
HO [auth W],
UN [auth V],
UO [auth X]
IPR033253Cilia- and flagella-associated protein 45Family
IPR040441Cilia- and flagella-associated protein 20/CFAP20DCFamily
IPR007714CFA20 domainDomain
GQ [auth Z],
IP [auth Y]
IPR043597Trichohyalin-plectin-homology domainDomain
GQ [auth Z],
IP [auth Y]
IPR039986Cilia- and flagella- associated protein 210Family
HQ [auth a]IPR029375Cilia- and flagella-associated protein 141Family
LC [auth E1],
MC [auth E2],
NC [auth E3],
OC [auth E4]
IPR029203Tektin bundle-interacting protein 1Family
IPR000435TektinsFamily
IPR048256Tektin-likeFamily
IPR018902Ciliary microtubule inner protein 2A-C-like domainDomain
IPR052683Ciliary Microtubule Inner Protein 2AFamily
XF [auth I1],
YF [auth I2],
ZF [auth I3]
IPR018902Ciliary microtubule inner protein 2A-C-like domainDomain
XF [auth I1],
YF [auth I2],
ZF [auth I3]
IPR052329Ciliary Microtubule Inner Protein 2CFamily
BL [auth Q1],
CL [auth Q2],
DL [auth Q3]
IPR015070DJBP, EF-hand domainDomain
BL [auth Q1],
CL [auth Q2],
DL [auth Q3]
IPR018247EF-Hand 1, calcium-binding siteBinding Site
BL [auth Q1],
CL [auth Q2],
DL [auth Q3]
IPR002048EF-hand domainDomain
BL [auth Q1],
CL [auth Q2],
DL [auth Q3]
IPR052603EF-hand calcium-binding domain-containing protein 6Family
BL [auth Q1],
CL [auth Q2],
DL [auth Q3]
IPR011992EF-hand domain pairHomologous Superfamily
RL [auth R1],
SL [auth R2],
TL [auth R3]
IPR029147Cilia- and flagella-associated protein 77Family
IPR019399Parkin co-regulated proteinFamily
IPR027818Sperm acrosome-associated protein 9Family
IPR000435TektinsFamily
IPR048256Tektin-likeFamily