SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-1H NOESY | 3 mM Sfc | 92% H2O/8% D2O | 0.1 | 6.1 | ambient atm | 303 | |
| 2 | 2D 1H-1H TOCSY | 3 mM Sfc | 92% H2O/8% D2O | 0.1 | 6.1 | ambient atm | 303 | |
| 3 | 2D DQF-COSY | 3 mM Sfc | 92% H2O/8% D2O | 0.1 | 6.1 | ambient atm | 303 | |
| 4 | 2D 1H-1H NOESY | 3 mM Sfc | 100% D2O | 0.1 | 6.1 | ambient atm | 303 | |
| 5 | 2D 1H-1H TOCSY | 3 mM Sfc | 100% D2O | 0.1 | 6.1 | ambient atm | 303 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | DRX | 500 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| torsion angle dynamics, simulated annealing | XWIN-NMR | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | target function |
| Conformers Calculated Total Number | 600 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | data analysis | XWIN-NMR | Bruker Biospin | |
| 2 | peak picking | XEASY | Bartels et al. | |
| 3 | integration | Sparky | Goddard | |
| 4 | peak picking | Sparky | Goddard | |
| 5 | structure solution | PARADYANA | (INDYANA) Turner et al. | |
| 6 | superimposition | MOLMOL | 2.0 | Koradi, Billeter and Wuthrich |
| 7 | visual inspection | MOLMOL | 2.0 | Koradi, Billeter and Wuthrich |
| 8 | rms and mean structure calculations | MOLMOL | 2.0 | Koradi, Billeter and Wuthrich |
| 9 | stereochemical analysis | WHAT IF | 20030529-0952 | Vriend |
| 10 | identification and classification of the consensus secondary structure | ProcheckNMR | Laskowski and MacArthur | |
| 11 | refinement | PARADYANA | (INDYANA) Turner et al. | |
