2K5N | pdb_00002k5n

Solution NMR Structure of the N-Terminal Domain of Protein ECA1580 from Erwinia carotovora, Northeast Structural Genomics Consortium Target EwR156A

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	1.07 mM [U-100% 13C; U-100% 15N] NC, 0.02 % sodium azide, 100 mM DTT, 5 mM calcium chloride, 100 mM sodium chloride, 20 mM MES	95% H2O/5% D2O	0.235	6.5	ambient	298
2	2D 1H-13C HSQC	1.07 mM [U-100% 13C; U-100% 15N] NC, 0.02 % sodium azide, 100 mM DTT, 5 mM calcium chloride, 100 mM sodium chloride, 20 mM MES	95% H2O/5% D2O	0.235	6.5	ambient	298
3	3D HNCO	1.07 mM [U-100% 13C; U-100% 15N] NC, 0.02 % sodium azide, 100 mM DTT, 5 mM calcium chloride, 100 mM sodium chloride, 20 mM MES	95% H2O/5% D2O	0.235	6.5	ambient	298
4	4,3 D GFT HNNACBCA	1.07 mM [U-100% 13C; U-100% 15N] NC, 0.02 % sodium azide, 100 mM DTT, 5 mM calcium chloride, 100 mM sodium chloride, 20 mM MES	95% H2O/5% D2O	0.235	6.5	ambient	298
5	4,3 D GFT CABCACONHN	1.07 mM [U-100% 13C; U-100% 15N] NC, 0.02 % sodium azide, 100 mM DTT, 5 mM calcium chloride, 100 mM sodium chloride, 20 mM MES	95% H2O/5% D2O	0.235	6.5	ambient	298
6	4,3D HABCABCONHN	1.07 mM [U-100% 13C; U-100% 15N] NC, 0.02 % sodium azide, 100 mM DTT, 5 mM calcium chloride, 100 mM sodium chloride, 20 mM MES	95% H2O/5% D2O	0.235	6.5	ambient	298
7	4,3D GFT HCCH COSY	1.07 mM [U-100% 13C; U-100% 15N] NC, 0.02 % sodium azide, 100 mM DTT, 5 mM calcium chloride, 100 mM sodium chloride, 20 mM MES	95% H2O/5% D2O	0.235	6.5	ambient	298
8	3D HCCH-COSY	1.07 mM [U-100% 13C; U-100% 15N] NC, 0.02 % sodium azide, 100 mM DTT, 5 mM calcium chloride, 100 mM sodium chloride, 20 mM MES	95% H2O/5% D2O	0.235	6.5	ambient	298
9	3D simultaneous NOESY	1.07 mM [U-100% 13C; U-100% 15N] NC, 0.02 % sodium azide, 100 mM DTT, 5 mM calcium chloride, 100 mM sodium chloride, 20 mM MES	95% H2O/5% D2O	0.235	6.5	ambient	298
10	2D 1H-13C HSQC	1.864 mM [U-5% 13C; U-100% 15N] NC5, 0.02 % sodium azide, 100 mM DTT, 5 mM calcium chloride, 100 mM sodium chloride, 20 mM MES	95% H2O/5% D2O	0.235	6.5	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	INOVA	750

NMR Refinement
Method	Details	Software
simulated annealing, molecular dynamics		VnmrJ

NMR Ensemble Information
Conformer Selection Criteria	target function
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	VnmrJ		Varian
2	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3	processing	NMRDraw		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4	processing	SPSCAN		Glaser
5	chemical shift assignment	XEASY		Bartels et al.
6	data analysis	XEASY		Bartels et al.
7	peak picking	XEASY		Bartels et al.
8	chemical shift assignment	AutoAssign		Zimmerman, Moseley, Kulikowski and Montelione
9	data analysis	AutoAssign		Zimmerman, Moseley, Kulikowski and Montelione
10	structure solution	TALOS		Cornilescu, Delaglio and Bax
11	structure solution	CSI		(CSI) Wishart and Sykes
12	structure solution	CYANA	2.1	Guntert, Mumenthaler and Wuthrich
13	structure solution	AutoStructure		Huang, Tejero, Powers and Montelione
14	data analysis	MOLMOL		Koradi, Billeter and Wuthrich
15	refinement	MOLMOL		Koradi, Billeter and Wuthrich
16	refinement	PSVS		Bhattacharya and Montelione
17	refinement	CNS		Brunger, Adams, Clore, Gros, Nilges and Read
18	structure solution	CNS		Brunger, Adams, Clore, Gros, Nilges and Read

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.