Experiment: 3KT8

X-RAY DIFFRACTION

Initial Refinement Model(s)
Type	Source	Accession Code	Details
experimental model	PDB	3KT0	PDB ENTRY 3KT0

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, HANGING DROP	5.9	277	0.1M HEPES, 2.2M (NH4)2SO4, pH 5.9, vapor diffusion, hanging drop, temperature 277K

Crystal Properties
Matthews coefficient	Solvent content
5.089597	75.833054

Symmetry
Space Group	P 61

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	CCD	ADSC QUANTUM 210r		2008-11-23	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	PHOTON FACTORY BEAMLINE AR-NW12A	1.0000	Photon Factory	AR-NW12A

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	3	50	97.9	0.117	11.1	5.7		79287

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
	3	3.11	95.1		0.507		5.4	7673

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (Observed)	R-Work	R-Free	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	THROUGHOUT	PDB ENTRY 3KT0	3	49.04	75143	3988	97.79	0.24808	0.24678	0.27307	RANDOM	80.62

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-3.3	-1.65		-3.3		4.94

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	33.223
r_dihedral_angle_3_deg	14.229
r_dihedral_angle_4_deg	12.351
r_dihedral_angle_1_deg	4.73
r_mcangle_it	1.436
r_mcbond_it	1.232
r_angle_refined_deg	0.857
r_nbtor_refined	0.296
r_scangle_it	0.261
r_scbond_it	0.165

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	33.223
r_dihedral_angle_3_deg	14.229
r_dihedral_angle_4_deg	12.351
r_dihedral_angle_1_deg	4.73
r_mcangle_it	1.436
r_mcbond_it	1.232
r_angle_refined_deg	0.857
r_nbtor_refined	0.296
r_scangle_it	0.261
r_scbond_it	0.165
r_symmetry_vdw_refined	0.16
r_nbd_refined	0.155
r_xyhbond_nbd_refined	0.104
r_chiral_restr	0.059
r_symmetry_hbond_refined	0.059
r_bond_refined_d	0.006
r_gen_planes_refined	0.002
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	13091
Nucleic Acid Atoms
Solvent Atoms	21
Heterogen Atoms	110