Ligand validation:2Y1K

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 2Y1K designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
2Y1K_NAG_A_612	43%	47%	0.172	0.906	0.59	1.45	-	4	5	0	93%	0.9333
2Y1K_NAG_A_609	36%	41%	0.186	0.891	0.62	1.63	-	3	4	0	93%	0.9333
2Y1K_NAG_A_615	33%	7%	0.178	0.866	0.92	3.87	1	10	6	0	93%	0.9333
2Y1K_NAG_A_614	14%	44%	0.331	0.896	0.47	1.65	-	5	2	0	93%	0.9333
2Y1K_NAG_A_616	5%	31%	0.36	0.789	0.86	1.85	-	4	2	0	93%	0.9333
2Y1K_NAG_A_618	1%	44%	0.555	0.734	0.7	1.45	-	4	1	0	93%	0.9333
2Y1K_NAG_A_617	1%	40%	0.532	0.658	0.67	1.64	-	4	2	0	93%	0.9333
5LKR_NAG_B_608	57%	68%	0.094	0.869	0.56	0.67	-	1	0	0	100%	0.9333
5DYW_NAG_A_625	55%	54%	0.134	0.9	0.64	1.11	1	1	0	1	100%	0.9333
6F7Q_NAG_B_611	51%	56%	0.137	0.89	0.82	0.89	1	1	0	0	100%	0.896
7Q1P_NAG_A_603	49%	45%	0.122	0.867	1.1	1.03	1	1	0	0	100%	0.9333
1P0I_NAG_A_538	48%	58%	0.135	0.877	0.77	0.83	-	-	0	0	100%	0.6667
3H0C_NAG_A_794	100%	56%	0.021	0.995	0.61	1.08	-	1	0	0	100%	0.9333
5F9W_NAG_A_510	100%	88%	0.023	0.994	0.24	0.43	-	-	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.