3D4X | pdb_00003d4x


HEM: PROTOPORPHYRIN IX CONTAINING FE

HEM is a Ligand Of Interest in 3D4X designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3D4X_HEM_D_148Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3D4X_HEM_D_148Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3D4X_HEM_D_148Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3D4X_HEM_D_148 84% 13% 0.111 0.9721.98 2.02 7 880100%1
3D4X_HEM_C_143 81% 12% 0.118 0.9712.04 2.04 9 1100100%1
3D4X_HEM_B_148 81% 12% 0.113 0.9652 2.09 8 1420100%1
3D4X_HEM_A_143 71% 12% 0.137 0.9571.94 2.12 6 1110100%1
3GQR_HEM_B_148 79% 14% 0.118 0.9631.92 1.92 8 1230100%1
3GYS_HEM_G_143 65% 14% 0.163 0.9662 1.86 6 920100%1
3GQP_HEM_C_143 64% 14% 0.139 0.9371.92 1.91 6 1010100%1
1FHF_HEM_A_350 100% 17% 0.021 0.9971.8 1.82 12 340100%1
1HBH_HEM_A_144 100% 11% 0.019 0.9971.48 2.62 5 1250100%1
2D2C_HEM_A_301 100% 9% 0.024 0.9992.2 2.28 9 1240100%1
3EJD_HEM_B_405 100% 17% 0.018 0.9981.9 1.69 6 820100%1
3EJE_HEM_B_405 100% 18% 0.022 0.9971.91 1.6 8 870100%1