UMP: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE
UMP is a Ligand Of Interest in 3QJ7 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3QJ7_UMP_B_601 | 96% | 35% | 0.079 | 0.989 | 0.87 | 1.67 | 1 | 6 | 3 | 0 | 100% | 1 |
3QJ7_UMP_D_603 | 93% | 33% | 0.084 | 0.98 | 0.84 | 1.77 | - | 5 | 0 | 0 | 100% | 1 |
3QJ7_UMP_C_602 | 88% | 32% | 0.108 | 0.984 | 0.88 | 1.79 | 1 | 5 | 1 | 0 | 100% | 1 |
3QJ7_UMP_A_600 | 86% | 32% | 0.109 | 0.978 | 0.86 | 1.82 | - | 7 | 1 | 0 | 100% | 1 |
4FQS_UMP_B_301 | 96% | 2% | 0.07 | 0.978 | 4.55 | 1.93 | 11 | 5 | 2 | 0 | 100% | 1 |
4FOX_UMP_C_302 | 61% | 2% | 0.175 | 0.964 | 5.01 | 1.71 | 13 | 5 | 1 | 0 | 100% | 1 |
3TPY_UMP_A_154 | 100% | 40% | 0.041 | 0.993 | 0.89 | 1.44 | 1 | 5 | 0 | 0 | 100% | 0.3 |
3TQ4_UMP_A_777 | 100% | 32% | 0.038 | 0.99 | 1.04 | 1.65 | 1 | 8 | 0 | 0 | 100% | 0.8 |
3TQ5_UMP_A_777 | 100% | 22% | 0.046 | 0.989 | 1.35 | 1.9 | 3 | 6 | 0 | 0 | 100% | 1 |
3TQ3_UMP_A_777 | 100% | 38% | 0.049 | 0.99 | 0.91 | 1.5 | 1 | 5 | 0 | 0 | 100% | 0.3 |
3TRN_UMP_A_777 | 99% | 30% | 0.047 | 0.987 | 1.2 | 1.58 | 2 | 6 | 0 | 0 | 100% | 1 |