UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 3S27 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3S27_UDP_D_901 | 77% | 29% | 0.148 | 0.989 | 1.03 | 1.81 | - | 6 | 2 | 0 | 100% | 1 |
| 3S27_UDP_C_901 | 76% | 32% | 0.147 | 0.984 | 1.06 | 1.63 | 1 | 7 | 1 | 0 | 100% | 1 |
| 3S27_UDP_A_901 | 75% | 30% | 0.158 | 0.991 | 1.04 | 1.71 | - | 6 | 0 | 0 | 100% | 1 |
| 3S27_UDP_G_901 | 72% | 35% | 0.165 | 0.99 | 0.97 | 1.56 | - | 6 | 1 | 0 | 100% | 1 |
| 3S27_UDP_E_901 | 70% | 34% | 0.168 | 0.987 | 1.03 | 1.56 | 1 | 6 | 4 | 0 | 100% | 1 |
| 3S27_UDP_H_901 | 69% | 30% | 0.164 | 0.98 | 1.02 | 1.75 | - | 6 | 0 | 0 | 100% | 1 |
| 3S27_UDP_F_901 | 66% | 29% | 0.181 | 0.987 | 1 | 1.81 | 1 | 8 | 1 | 0 | 100% | 1 |
| 3S27_UDP_B_901 | 62% | 29% | 0.182 | 0.977 | 1.02 | 1.82 | 1 | 7 | 0 | 0 | 100% | 1 |
| 3S28_UDP_B_901 | 79% | 29% | 0.141 | 0.989 | 0.97 | 1.85 | - | 8 | 1 | 0 | 100% | 0.98 |
| 3S29_UDP_A_901 | 74% | 35% | 0.162 | 0.993 | 0.95 | 1.59 | - | 6 | 1 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.31 | 2.68 | 13 | 13 | 2 | 0 | 100% | 1 |
| 8X3Q_UDP_A_401 | 100% | 3% | 0.021 | 0.996 | 3.31 | 2.67 | 13 | 13 | 1 | 0 | 100% | 1 |
| 8VH8_UDP_D_702 | 100% | 67% | 0.032 | 0.995 | 0.59 | 0.69 | - | - | 0 | 0 | 100% | 1 |
| 4GYW_UDP_C_1101 | 100% | 37% | 0.037 | 0.988 | 1.03 | 1.45 | 2 | 4 | 0 | 0 | 100% | 1 |
| 2IV7_UDP_A_1372 | 100% | 40% | 0.035 | 0.984 | 0.85 | 1.49 | - | 4 | 0 | 0 | 100% | 1 |
