GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 3UFX designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3UFX_GDP_E_398 | 65% | 45% | 0.133 | 0.936 | 0.94 | 1.16 | 1 | 4 | 0 | 0 | 100% | 0.85 |
| 3UFX_GDP_I_398 | 58% | 47% | 0.142 | 0.919 | 0.89 | 1.15 | 1 | 4 | 0 | 0 | 100% | 0.8 |
| 3UFX_GDP_G_398 | 39% | 40% | 0.189 | 0.896 | 0.96 | 1.36 | 2 | 4 | 0 | 0 | 100% | 0.77 |
| 3UFX_GDP_B_398 | 30% | 40% | 0.217 | 0.88 | 0.91 | 1.41 | - | 5 | 0 | 0 | 100% | 0.8 |
| 1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 2CXX_GDP_B_2401 | 100% | 29% | 0.031 | 0.989 | 1.26 | 1.57 | 1 | 3 | 0 | 0 | 100% | 1 |
| 4LUC_GDP_A_204 | 100% | 40% | 0.036 | 0.992 | 1.22 | 1.11 | 2 | 2 | 0 | 0 | 100% | 1 |
| 5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
| 8V3A_GDP_B_201 | 100% | 42% | 0.036 | 0.991 | 1.1 | 1.14 | 1 | 2 | 0 | 0 | 100% | 1 |
