4N0E | pdb_00004n0e


GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 4N0E designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4N0E_GDP_A_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4N0E_GDP_A_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4N0E_GDP_A_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4N0E_GDP_A_401 66% 44% 0.179 0.9840.98 1.18 2 400100%1
1AS2_GDP_A_355 96% 8% 0.078 0.991.43 3.07 5 1200100%1
4PAN_GDP_A_401 96% 24% 0.079 0.9881.21 1.9 3 700100%1
1AS3_GDP_A_355 95% 15% 0.084 0.9881.47 2.25 5 530100%1
3UMR_GDP_A_400 94% 48% 0.08 0.981.03 0.99 1 300100%1
2G83_GDP_B_355 90% 2% 0.073 0.9573.69 3.03 17 1620100%1
1TVK_GDP_B_1500 100% 23% 0.012 0.9992.28 0.95 3 280100%1
8QEG_GDP_A_401 100% 51% 0.031 0.9931.02 0.87 3 100100%1
8QEH_GDP_A_405 100% 55% 0.03 0.9930.89 0.85 1 100100%1
9BAJ_GDP_A_203 100% 41% 0.032 0.9941.22 1.1 2 210100%1
1RRG_GDP_A_183 100% 17% 0.036 0.9972.05 1.56 7 300100%1