4RKM
HEM: PROTOPORPHYRIN IX CONTAINING FE
HEM is a Ligand Of Interest in 4RKM designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
4RKM_HEM_F_813 | 87% | 9% | 0.104 | 0.975 | 1.95 | 2.57 | 7 | 10 | 9 | 0 | 100% | 1 |
4RKM_HEM_J_812 | 86% | 9% | 0.103 | 0.973 | 1.96 | 2.45 | 7 | 11 | 7 | 0 | 100% | 1 |
4RKM_HEM_E_812 | 86% | 9% | 0.106 | 0.974 | 1.99 | 2.51 | 7 | 15 | 10 | 0 | 100% | 1 |
4RKM_HEM_C_812 | 86% | 9% | 0.107 | 0.975 | 2.01 | 2.51 | 8 | 14 | 8 | 0 | 100% | 1 |
4RKM_HEM_G_812 | 85% | 9% | 0.103 | 0.967 | 1.97 | 2.55 | 7 | 15 | 12 | 0 | 100% | 1 |
4RKM_HEM_H_813 | 85% | 9% | 0.107 | 0.971 | 1.94 | 2.55 | 8 | 11 | 11 | 0 | 100% | 1 |
4RKM_HEM_G_807 | 84% | 9% | 0.114 | 0.976 | 1.98 | 2.41 | 9 | 12 | 11 | 0 | 100% | 1 |
4RKM_HEM_H_808 | 84% | 9% | 0.106 | 0.967 | 1.99 | 2.42 | 8 | 13 | 13 | 0 | 100% | 1 |
4RKM_HEM_D_807 | 83% | 10% | 0.114 | 0.974 | 1.98 | 2.36 | 7 | 12 | 12 | 0 | 100% | 1 |
4RKM_HEM_I_812 | 83% | 9% | 0.108 | 0.967 | 1.95 | 2.57 | 7 | 14 | 11 | 0 | 100% | 1 |
4RKM_HEM_D_808 | 83% | 8% | 0.116 | 0.974 | 2 | 2.59 | 8 | 14 | 11 | 0 | 100% | 1 |
4RKM_HEM_D_810 | 82% | 8% | 0.119 | 0.975 | 1.96 | 2.68 | 7 | 15 | 11 | 0 | 100% | 1 |
4RKM_HEM_E_811 | 82% | 8% | 0.113 | 0.968 | 1.97 | 2.63 | 8 | 13 | 7 | 0 | 100% | 1 |
4RKM_HEM_D_813 | 82% | 9% | 0.118 | 0.973 | 1.98 | 2.52 | 7 | 10 | 9 | 0 | 100% | 1 |
4RKM_HEM_D_809 | 82% | 10% | 0.124 | 0.979 | 1.95 | 2.35 | 8 | 12 | 13 | 0 | 100% | 1 |
4RKM_HEM_K_812 | 82% | 10% | 0.111 | 0.965 | 1.95 | 2.41 | 8 | 11 | 8 | 0 | 100% | 1 |
4RKM_HEM_G_806 | 81% | 9% | 0.119 | 0.973 | 1.97 | 2.48 | 8 | 10 | 11 | 0 | 100% | 1 |
4RKM_HEM_G_810 | 81% | 9% | 0.117 | 0.97 | 1.96 | 2.56 | 7 | 13 | 9 | 0 | 100% | 1 |
4RKM_HEM_G_811 | 81% | 8% | 0.117 | 0.97 | 1.99 | 2.64 | 7 | 14 | 8 | 0 | 100% | 1 |
4RKM_HEM_D_812 | 81% | 9% | 0.124 | 0.976 | 1.98 | 2.51 | 7 | 11 | 9 | 0 | 100% | 1 |
4RKM_HEM_B_813 | 81% | 8% | 0.118 | 0.969 | 1.98 | 2.55 | 7 | 13 | 9 | 0 | 100% | 1 |
4RKM_HEM_K_811 | 81% | 9% | 0.118 | 0.969 | 1.98 | 2.49 | 8 | 12 | 10 | 0 | 100% | 1 |
4RKM_HEM_G_813 | 80% | 9% | 0.113 | 0.963 | 1.98 | 2.45 | 7 | 13 | 9 | 0 | 100% | 1 |
4RKM_HEM_C_811 | 80% | 8% | 0.12 | 0.97 | 1.97 | 2.62 | 8 | 12 | 8 | 0 | 100% | 1 |
4RKM_HEM_H_814 | 80% | 9% | 0.122 | 0.971 | 1.98 | 2.45 | 8 | 10 | 11 | 0 | 100% | 1 |
4RKM_HEM_D_811 | 80% | 8% | 0.126 | 0.975 | 1.99 | 2.57 | 8 | 14 | 9 | 0 | 100% | 1 |
4RKM_HEM_J_809 | 80% | 9% | 0.127 | 0.976 | 2.03 | 2.45 | 8 | 14 | 12 | 0 | 100% | 1 |
4RKM_HEM_D_806 | 80% | 8% | 0.118 | 0.966 | 1.94 | 2.6 | 7 | 12 | 9 | 0 | 100% | 1 |
4RKM_HEM_F_814 | 79% | 9% | 0.127 | 0.974 | 1.97 | 2.5 | 7 | 11 | 9 | 0 | 100% | 1 |
4RKM_HEM_H_810 | 79% | 9% | 0.123 | 0.969 | 1.98 | 2.41 | 7 | 13 | 10 | 0 | 100% | 1 |
4RKM_HEM_A_813 | 79% | 8% | 0.127 | 0.973 | 2.01 | 2.59 | 8 | 11 | 10 | 0 | 100% | 1 |
4RKM_HEM_J_807 | 79% | 9% | 0.118 | 0.963 | 2 | 2.38 | 8 | 13 | 11 | 0 | 100% | 1 |
4RKM_HEM_K_810 | 79% | 9% | 0.125 | 0.97 | 1.97 | 2.54 | 7 | 14 | 8 | 0 | 100% | 1 |
4RKM_HEM_J_810 | 79% | 9% | 0.127 | 0.972 | 1.98 | 2.48 | 7 | 13 | 8 | 0 | 100% | 1 |
4RKM_HEM_H_812 | 78% | 8% | 0.12 | 0.964 | 1.99 | 2.56 | 8 | 13 | 7 | 0 | 100% | 1 |
4RKM_HEM_A_812 | 78% | 7% | 0.128 | 0.972 | 1.99 | 2.73 | 8 | 16 | 11 | 0 | 100% | 1 |
4RKM_HEM_J_808 | 78% | 9% | 0.131 | 0.974 | 1.98 | 2.52 | 8 | 13 | 8 | 0 | 100% | 1 |
4RKM_HEM_J_811 | 78% | 8% | 0.122 | 0.964 | 1.98 | 2.62 | 7 | 12 | 8 | 0 | 100% | 1 |
4RKM_HEM_G_808 | 78% | 9% | 0.133 | 0.975 | 1.97 | 2.54 | 8 | 9 | 8 | 0 | 100% | 1 |
4RKM_HEM_L_811 | 77% | 8% | 0.121 | 0.962 | 1.97 | 2.58 | 7 | 16 | 9 | 0 | 100% | 1 |
4RKM_HEM_K_809 | 77% | 10% | 0.13 | 0.971 | 2.01 | 2.3 | 7 | 12 | 12 | 0 | 100% | 1 |
4RKM_HEM_H_811 | 76% | 9% | 0.13 | 0.968 | 1.94 | 2.53 | 7 | 15 | 12 | 0 | 100% | 1 |
4RKM_HEM_F_808 | 76% | 9% | 0.132 | 0.969 | 2.01 | 2.38 | 8 | 13 | 11 | 0 | 100% | 1 |
4RKM_HEM_E_810 | 76% | 8% | 0.136 | 0.973 | 1.97 | 2.56 | 8 | 13 | 9 | 0 | 100% | 1 |
4RKM_HEM_B_808 | 76% | 9% | 0.14 | 0.977 | 1.95 | 2.45 | 8 | 11 | 11 | 0 | 100% | 1 |
4RKM_HEM_F_812 | 76% | 8% | 0.123 | 0.959 | 1.96 | 2.72 | 7 | 12 | 7 | 0 | 100% | 1 |
4RKM_HEM_B_812 | 76% | 9% | 0.136 | 0.972 | 1.98 | 2.54 | 8 | 13 | 8 | 0 | 100% | 1 |
4RKM_HEM_G_809 | 76% | 10% | 0.137 | 0.973 | 1.96 | 2.38 | 7 | 13 | 11 | 0 | 100% | 1 |
4RKM_HEM_J_806 | 75% | 8% | 0.135 | 0.969 | 1.96 | 2.64 | 9 | 16 | 11 | 0 | 100% | 1 |
4RKM_HEM_A_811 | 75% | 8% | 0.137 | 0.971 | 1.97 | 2.7 | 9 | 17 | 7 | 0 | 100% | 1 |
4RKM_HEM_A_807 | 75% | 10% | 0.141 | 0.975 | 1.99 | 2.34 | 8 | 11 | 11 | 0 | 100% | 1 |
4RKM_HEM_F_811 | 75% | 9% | 0.142 | 0.976 | 1.95 | 2.56 | 7 | 14 | 10 | 0 | 100% | 1 |
4RKM_HEM_I_811 | 75% | 8% | 0.129 | 0.962 | 1.95 | 2.62 | 7 | 12 | 10 | 0 | 100% | 1 |
4RKM_HEM_B_810 | 75% | 9% | 0.149 | 0.982 | 1.98 | 2.44 | 8 | 12 | 10 | 0 | 100% | 1 |
4RKM_HEM_A_810 | 74% | 8% | 0.143 | 0.975 | 1.96 | 2.59 | 8 | 13 | 10 | 0 | 100% | 1 |
4RKM_HEM_C_810 | 74% | 8% | 0.143 | 0.975 | 1.99 | 2.67 | 7 | 14 | 8 | 0 | 100% | 1 |
4RKM_HEM_B_807 | 74% | 9% | 0.141 | 0.972 | 1.95 | 2.54 | 8 | 15 | 11 | 0 | 100% | 1 |
4RKM_HEM_C_806 | 74% | 8% | 0.151 | 0.982 | 1.95 | 2.59 | 8 | 13 | 9 | 0 | 100% | 1 |
4RKM_HEM_A_806 | 74% | 9% | 0.141 | 0.971 | 1.94 | 2.54 | 8 | 14 | 9 | 0 | 100% | 1 |
4RKM_HEM_K_808 | 73% | 9% | 0.145 | 0.974 | 1.95 | 2.49 | 7 | 10 | 9 | 0 | 100% | 1 |
4RKM_HEM_F_810 | 73% | 10% | 0.149 | 0.978 | 2 | 2.34 | 8 | 12 | 11 | 0 | 100% | 1 |
4RKM_HEM_C_813 | 73% | 8% | 0.136 | 0.963 | 1.97 | 2.57 | 7 | 12 | 9 | 0 | 100% | 1 |
4RKM_HEM_L_806 | 72% | 9% | 0.143 | 0.969 | 2 | 2.49 | 8 | 13 | 8 | 0 | 100% | 1 |
4RKM_HEM_K_807 | 71% | 10% | 0.145 | 0.967 | 1.97 | 2.38 | 8 | 12 | 13 | 0 | 100% | 1 |
4RKM_HEM_C_808 | 71% | 9% | 0.157 | 0.979 | 1.94 | 2.58 | 8 | 14 | 10 | 0 | 100% | 1 |
4RKM_HEM_J_813 | 71% | 10% | 0.145 | 0.966 | 2.01 | 2.36 | 8 | 11 | 10 | 0 | 100% | 1 |
4RKM_HEM_E_813 | 71% | 9% | 0.145 | 0.965 | 1.98 | 2.48 | 8 | 9 | 10 | 0 | 100% | 1 |
4RKM_HEM_I_807 | 71% | 10% | 0.152 | 0.972 | 1.96 | 2.39 | 8 | 12 | 11 | 0 | 100% | 1 |
4RKM_HEM_A_809 | 70% | 11% | 0.157 | 0.977 | 1.93 | 2.25 | 7 | 14 | 13 | 0 | 100% | 1 |
4RKM_HEM_B_811 | 70% | 9% | 0.155 | 0.972 | 1.97 | 2.55 | 7 | 15 | 10 | 0 | 100% | 1 |
4RKM_HEM_E_806 | 69% | 8% | 0.16 | 0.976 | 1.99 | 2.57 | 8 | 11 | 11 | 0 | 100% | 1 |
4RKM_HEM_K_813 | 69% | 9% | 0.134 | 0.948 | 1.99 | 2.51 | 7 | 12 | 7 | 0 | 100% | 1 |
4RKM_HEM_I_806 | 69% | 9% | 0.158 | 0.972 | 1.98 | 2.5 | 7 | 14 | 9 | 0 | 100% | 1 |
4RKM_HEM_A_808 | 68% | 9% | 0.163 | 0.977 | 1.97 | 2.52 | 8 | 12 | 9 | 0 | 100% | 1 |
4RKM_HEM_C_809 | 68% | 9% | 0.163 | 0.977 | 1.98 | 2.54 | 8 | 12 | 11 | 0 | 100% | 1 |
4RKM_HEM_L_812 | 68% | 10% | 0.144 | 0.957 | 1.97 | 2.37 | 7 | 11 | 7 | 0 | 100% | 1 |
4RKM_HEM_B_809 | 68% | 8% | 0.164 | 0.977 | 1.97 | 2.66 | 8 | 12 | 9 | 0 | 100% | 1 |
4RKM_HEM_B_814 | 68% | 9% | 0.147 | 0.959 | 1.99 | 2.49 | 7 | 11 | 9 | 0 | 100% | 1 |
4RKM_HEM_H_809 | 68% | 9% | 0.156 | 0.968 | 2.02 | 2.47 | 8 | 12 | 9 | 0 | 100% | 1 |
4RKM_HEM_I_813 | 67% | 9% | 0.145 | 0.953 | 1.99 | 2.53 | 7 | 13 | 8 | 0 | 100% | 1 |
4RKM_HEM_C_807 | 67% | 10% | 0.168 | 0.976 | 1.98 | 2.38 | 8 | 11 | 11 | 0 | 100% | 1 |
4RKM_HEM_I_810 | 65% | 9% | 0.155 | 0.959 | 1.92 | 2.55 | 7 | 14 | 10 | 0 | 100% | 1 |
4RKM_HEM_E_807 | 65% | 9% | 0.165 | 0.969 | 1.97 | 2.42 | 7 | 11 | 10 | 0 | 100% | 1 |
4RKM_HEM_E_809 | 65% | 9% | 0.171 | 0.975 | 2 | 2.38 | 8 | 13 | 12 | 0 | 100% | 1 |
4RKM_HEM_L_808 | 65% | 9% | 0.164 | 0.967 | 2.01 | 2.5 | 8 | 11 | 10 | 0 | 100% | 1 |
4RKM_HEM_E_808 | 61% | 8% | 0.182 | 0.973 | 1.93 | 2.61 | 7 | 12 | 9 | 0 | 100% | 1 |
4RKM_HEM_H_807 | 61% | 8% | 0.177 | 0.966 | 1.97 | 2.56 | 7 | 13 | 8 | 0 | 100% | 1 |
4RKM_HEM_K_806 | 60% | 8% | 0.182 | 0.969 | 1.98 | 2.7 | 9 | 17 | 10 | 0 | 100% | 1 |
4RKM_HEM_L_810 | 60% | 8% | 0.175 | 0.961 | 1.96 | 2.59 | 7 | 14 | 7 | 0 | 100% | 1 |
4RKM_HEM_F_809 | 57% | 9% | 0.193 | 0.971 | 1.98 | 2.47 | 7 | 13 | 8 | 0 | 100% | 1 |
4RKM_HEM_L_813 | 56% | 10% | 0.171 | 0.943 | 1.99 | 2.36 | 7 | 14 | 10 | 0 | 100% | 1 |
4RKM_HEM_I_808 | 53% | 9% | 0.206 | 0.97 | 1.95 | 2.51 | 7 | 15 | 10 | 0 | 100% | 1 |
4RKM_HEM_L_807 | 53% | 10% | 0.203 | 0.966 | 2 | 2.35 | 8 | 12 | 14 | 0 | 100% | 1 |
4RKM_HEM_F_807 | 53% | 8% | 0.205 | 0.968 | 1.99 | 2.64 | 8 | 10 | 12 | 0 | 100% | 1 |
4RKM_HEM_L_809 | 53% | 10% | 0.205 | 0.967 | 2.01 | 2.32 | 8 | 11 | 13 | 0 | 100% | 1 |
4RKM_HEM_I_809 | 50% | 10% | 0.208 | 0.959 | 1.96 | 2.31 | 7 | 11 | 11 | 0 | 100% | 1 |
4RKN_HEM_B_905 | 100% | 21% | 0.039 | 0.986 | 1.39 | 1.88 | 6 | 11 | 0 | 0 | 100% | 1 |
1FHF_HEM_A_350 | 100% | 17% | 0.021 | 0.997 | 1.8 | 1.82 | 12 | 3 | 4 | 0 | 100% | 1 |
1HBH_HEM_B_148 | 100% | 19% | 0.016 | 0.998 | 1.59 | 1.89 | 8 | 11 | 2 | 0 | 100% | 1 |
2D2C_HEM_A_301 | 100% | 9% | 0.024 | 0.999 | 2.2 | 2.28 | 9 | 12 | 4 | 0 | 100% | 1 |
3EJD_HEM_B_405 | 100% | 17% | 0.018 | 0.998 | 1.9 | 1.69 | 6 | 8 | 2 | 0 | 100% | 1 |
3EJE_HEM_B_405 | 100% | 18% | 0.022 | 0.997 | 1.91 | 1.6 | 8 | 8 | 1 | 0 | 100% | 1 |