UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 6XPT designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
6XPT_UDP_G_202 | 76% | 87% | 0.121 | 0.959 | 0.23 | 0.45 | - | - | 0 | 0 | 100% | 0.94 |
6XPT_UDP_B_202 | 61% | 71% | 0.12 | 0.909 | 0.35 | 0.76 | - | 2 | 0 | 0 | 100% | 1 |
6XPT_UDP_C_201 | 59% | 68% | 0.142 | 0.923 | 0.45 | 0.78 | - | 2 | 0 | 0 | 100% | 0.84 |
6XPT_UDP_H_201 | 57% | 71% | 0.146 | 0.921 | 0.47 | 0.63 | - | 1 | 0 | 0 | 100% | 0.81 |
6XPT_UDP_E_201 | 39% | 72% | 0.176 | 0.882 | 0.39 | 0.68 | - | 1 | 0 | 0 | 100% | 0.73 |
6XPT_UDP_A_201 | 35% | 74% | 0.179 | 0.867 | 0.38 | 0.64 | - | 1 | 2 | 0 | 100% | 0.77 |
8X3Q_UDP_A_401 | 100% | 3% | 0.021 | 0.996 | 3.31 | 2.67 | 13 | 13 | 1 | 0 | 100% | 1 |
8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.31 | 2.68 | 13 | 13 | 2 | 0 | 100% | 1 |
8VH8_UDP_D_702 | 100% | 67% | 0.032 | 0.995 | 0.59 | 0.69 | - | - | 0 | 0 | 100% | 1 |
4GYW_UDP_C_1101 | 100% | 37% | 0.037 | 0.988 | 1.03 | 1.45 | 2 | 4 | 0 | 0 | 100% | 1 |
2IV7_UDP_A_1372 | 100% | 40% | 0.035 | 0.984 | 0.85 | 1.49 | - | 4 | 0 | 0 | 100% | 1 |