UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 6YJT designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
6YJT_UDP_BBB_802 | 95% | 32% | 0.086 | 0.99 | 0.99 | 1.7 | 1 | 9 | 0 | 0 | 100% | 1 |
6YJT_UDP_AAA_801 | 89% | 33% | 0.099 | 0.979 | 1.19 | 1.47 | 3 | 6 | 0 | 0 | 100% | 1 |
9F5H_UDP_B_801 | 92% | 57% | 0.073 | 0.964 | 0.8 | 0.84 | - | 1 | 0 | 0 | 100% | 0.7 |
6YJU_UDP_AAA_801 | 87% | 32% | 0.106 | 0.978 | 0.98 | 1.71 | 2 | 6 | 0 | 0 | 100% | 0.8 |
8X3Q_UDP_A_401 | 100% | 3% | 0.021 | 0.996 | 3.31 | 2.67 | 13 | 13 | 1 | 0 | 100% | 1 |
8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.31 | 2.68 | 13 | 13 | 2 | 0 | 100% | 1 |
8VH8_UDP_D_702 | 100% | 67% | 0.032 | 0.995 | 0.59 | 0.69 | - | - | 0 | 0 | 100% | 1 |
4GYW_UDP_C_1101 | 100% | 37% | 0.037 | 0.988 | 1.03 | 1.45 | 2 | 4 | 0 | 0 | 100% | 1 |
2IV7_UDP_A_1372 | 100% | 40% | 0.035 | 0.984 | 0.85 | 1.49 | - | 4 | 0 | 0 | 100% | 1 |