UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 7BIX designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
7BIX_UDP_C_302 | 54% | 44% | 0.198 | 0.966 | 1.01 | 1.15 | 1 | 2 | 0 | 0 | 100% | 0.98 |
7BIX_UDP_J_302 | 53% | 45% | 0.194 | 0.955 | 1 | 1.11 | 1 | 2 | 3 | 0 | 100% | 0.98 |
7BIX_UDP_D_302 | 52% | 49% | 0.192 | 0.952 | 0.93 | 1.02 | 1 | 2 | 2 | 0 | 100% | 0.98 |
7BIX_UDP_B_300 | 49% | 45% | 0.195 | 0.944 | 0.97 | 1.14 | 1 | 2 | 4 | 0 | 100% | 0.98 |
7BIX_UDP_I_302 | 48% | 44% | 0.213 | 0.959 | 1.01 | 1.17 | 1 | 3 | 2 | 0 | 100% | 0.98 |
7BIX_UDP_H_301 | 34% | 49% | 0.231 | 0.917 | 0.93 | 1.02 | 1 | 2 | 0 | 0 | 100% | 0.98 |
7BIX_UDP_E_301 | 32% | 42% | 0.254 | 0.927 | 1.05 | 1.2 | 1 | 3 | 3 | 0 | 100% | 0.98 |
7BIX_UDP_K_301 | 17% | 44% | 0.324 | 0.902 | 1.02 | 1.16 | 1 | 3 | 4 | 0 | 100% | 0.98 |
3NWY_UDP_B_263 | 69% | 36% | 0.14 | 0.956 | 0.96 | 1.56 | 1 | 7 | 0 | 0 | 100% | 0.98 |
8X3Q_UDP_C_401 | 100% | 3% | 0.015 | 0.998 | 3.32 | 2.69 | 13 | 13 | 0 | 0 | 100% | 1 |
8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.31 | 2.68 | 13 | 13 | 2 | 0 | 100% | 1 |
8VH8_UDP_C_704 | 100% | 62% | 0.032 | 0.995 | 0.55 | 0.9 | - | 1 | 0 | 0 | 100% | 1 |
4GYW_UDP_C_1101 | 100% | 37% | 0.037 | 0.988 | 1.03 | 1.45 | 2 | 4 | 0 | 0 | 100% | 1 |
2IV7_UDP_A_1372 | 100% | 40% | 0.035 | 0.984 | 0.85 | 1.49 | - | 4 | 0 | 0 | 100% | 1 |