RCSB PDB: Search

AllSelected

5A35 \| pdb_00005a35	Download File View File

Crystal structure of Glycine Cleavage Protein H-Like (GcvH-L) from Streptococcus pyogenes

Rack, J.G.M., Morra, R., Barkauskaite, E., Kraehenbuehl, R., Ariza, A., Qu, Y., Ortmayer, M., Leidecker, O., Cameron, D.R., Matic, I., Peleg, A.Y., Leys, D., Traven, A., Ahel, I.

(2015) Mol Cell 59: 309

Released	2015-07-29
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	GLYCINE CLEAVAGE SYSTEM H PROTEIN (protein)
Unique Ligands	1PE

Explore in 3D

5A3A \| pdb_00005a3a	Download File View File

Crystal structure of the ADP-ribosylating sirtuin (SirTM) from Streptococcus pyogenes (Apo form)

Rack, J.G.M., Morra, R., Barkauskaite, E., Kraehenbuehl, R., Ariza, A., Qu, Y., Ortmayer, M., Leidecker, O., Cameron, D.R., Matic, I., Peleg, A.Y., Leys, D., Traven, A., Ahel, I.

(2015) Mol Cell 59: 309

Released	2015-07-29
Method	X-RAY DIFFRACTION 1.54 Å
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	SIR2 FAMILY PROTEIN (protein)
Unique Ligands	EDO, GLY, ZN

Explore in 3D

5A3B \| pdb_00005a3b	Download File View File

Crystal structure of the ADP-ribosylating sirtuin (SirTM) from Streptococcus pyogenes in complex with ADP-ribose

Rack, J.G.M., Morra, R., Barkauskaite, E., Kraehenbuehl, R., Ariza, A., Qu, Y., Ortmayer, M., Leidecker, O., Cameron, D.R., Matic, I., Peleg, A.Y., Leys, D., Traven, A., Ahel, I.

(2015) Mol Cell 59: 309

Released	2015-07-29
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	SIR2 FAMILY PROTEIN (protein)
Unique Ligands	ALA, APR, EDO, GLY, ZN

Explore in 3D

5A3C \| pdb_00005a3c	Download File View File

Crystal structure of the ADP-ribosylating sirtuin (SirTM) from Streptococcus pyogenes in complex with NAD

Rack, J.G.M., Morra, R., Barkauskaite, E., Kraehenbuehl, R., Ariza, A., Qu, Y., Ortmayer, M., Leidecker, O., Cameron, D.R., Matic, I., Peleg, A.Y., Leys, D., Traven, A., Ahel, I.

(2015) Mol Cell 59: 309

Released	2015-07-29
Method	X-RAY DIFFRACTION 2.03 Å
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	SIR2 FAMILY PROTEIN (protein)
Unique Ligands	EDO, GLY, NAD, ZN

Explore in 3D

AF_AFA2RBX3F1	Download File

Computed structure model of Chromosomal replication initiator protein DnaA

AlphaFold DB	AF-A2RBX3-F1
pLDDT (global)	88.48
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	Chromosomal replication initiator protein DnaA (protein)

Explore in 3D

AF_AFA2RBX7F1	Download File

Computed structure model of Peptidyl-tRNA hydrolase

AlphaFold DB	AF-A2RBX7-F1
pLDDT (global)	96.65
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	Peptidyl-tRNA hydrolase (protein)

Explore in 3D

AF_AFA2RBY9F1	Download File

Computed structure model of DNA repair protein RecO

AlphaFold DB	AF-A2RBY9-F1
pLDDT (global)	92.91
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	DNA repair protein RecO (protein)

Explore in 3D

AF_AFA2RBZ0F1	Download File

Computed structure model of Phosphate acyltransferase

AlphaFold DB	AF-A2RBZ0-F1
pLDDT (global)	94.52
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	Phosphate acyltransferase (protein)

Explore in 3D

AF_AFA2RBZ5F1	Download File

Computed structure model of Phosphoribosylformylglycinamidine cyclo-ligase

AlphaFold DB	AF-A2RBZ5-F1
pLDDT (global)	95.91
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	Phosphoribosylformylglycinamidine cyclo-ligase (protein)

Explore in 3D

AF_AFA2RC05F1	Download File

Computed structure model of Holliday junction ATP-dependent DNA helicase RuvB

AlphaFold DB	AF-A2RC05-F1
pLDDT (global)	91.8
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	Holliday junction ATP-dependent DNA helicase RuvB (protein)

Explore in 3D

AF_AFA2RC13F1	Download File

Computed structure model of 30S ribosomal protein S10

AlphaFold DB	AF-A2RC13-F1
pLDDT (global)	88.48
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	30S ribosomal protein S10 (protein)

Explore in 3D

AF_AFA2RC14F1	Download File

Computed structure model of 50S ribosomal protein L3

AlphaFold DB	AF-A2RC14-F1
pLDDT (global)	91.79
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	50S ribosomal protein L3 (protein)

Explore in 3D

AF_AFA2RC15F1	Download File

Computed structure model of 50S ribosomal protein L4

AlphaFold DB	AF-A2RC15-F1
pLDDT (global)	93.9
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	50S ribosomal protein L4 (protein)

Explore in 3D

AF_AFA2RC16F1	Download File

Computed structure model of 50S ribosomal protein L23

AlphaFold DB	AF-A2RC16-F1
pLDDT (global)	91.46
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	50S ribosomal protein L23 (protein)

Explore in 3D

AF_AFA2RC17F1	Download File

Computed structure model of 50S ribosomal protein L2

AlphaFold DB	AF-A2RC17-F1
pLDDT (global)	95.4
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	50S ribosomal protein L2 (protein)

Explore in 3D

AF_AFA2RC18F1	Download File

Computed structure model of 30S ribosomal protein S19

AlphaFold DB	AF-A2RC18-F1
pLDDT (global)	87.29
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	30S ribosomal protein S19 (protein)

Explore in 3D

AF_AFA2RC19F1	Download File

Computed structure model of 50S ribosomal protein L22

AlphaFold DB	AF-A2RC19-F1
pLDDT (global)	95.07
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	50S ribosomal protein L22 (protein)

Explore in 3D

AF_AFA2RC20F1	Download File

Computed structure model of 30S ribosomal protein S3

AlphaFold DB	AF-A2RC20-F1
pLDDT (global)	90.68
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	30S ribosomal protein S3 (protein)

Explore in 3D

AF_AFA2RC21F1	Download File

Computed structure model of 50S ribosomal protein L16

AlphaFold DB	AF-A2RC21-F1
pLDDT (global)	95.06
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	50S ribosomal protein L16 (protein)

Explore in 3D

AF_AFA2RC22F1	Download File

Computed structure model of 50S ribosomal protein L29

AlphaFold DB	AF-A2RC22-F1
pLDDT (global)	83.95
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	50S ribosomal protein L29 (protein)

Explore in 3D

AF_AFA2RC23F1	Download File

Computed structure model of 30S ribosomal protein S17

AlphaFold DB	AF-A2RC23-F1
pLDDT (global)	93.72
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	30S ribosomal protein S17 (protein)

Explore in 3D

AF_AFA2RC24F1	Download File

Computed structure model of 50S ribosomal protein L14

AlphaFold DB	AF-A2RC24-F1
pLDDT (global)	96.73
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	50S ribosomal protein L14 (protein)

Explore in 3D

AF_AFA2RC25F1	Download File

Computed structure model of 50S ribosomal protein L24

AlphaFold DB	AF-A2RC25-F1
pLDDT (global)	93.68
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	50S ribosomal protein L24 (protein)

Explore in 3D

AF_AFA2RC26F1	Download File

Computed structure model of 50S ribosomal protein L5

AlphaFold DB	AF-A2RC26-F1
pLDDT (global)	92.25
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	50S ribosomal protein L5 (protein)

Explore in 3D

AF_AFA2RC27F1	Download File

Computed structure model of 30S ribosomal protein S14 type Z

AlphaFold DB	AF-A2RC27-F1
pLDDT (global)	93.59
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	30S ribosomal protein S14 type Z (protein)

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

CSM Source Database

pLDDT Global Quality Score

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

5A35 | pdb_00005a35

5A3A | pdb_00005a3a

5A3B | pdb_00005a3b

5A3C | pdb_00005a3c