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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Banner, D.W."

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Search Summary

This query matches 110 Structures.

Refinements

Structure Determination Methodology

experimental (110)

Scientific Name of Source Organism

	Homo sapiens (94)
	Hirudo medicinalis (15)
	Mus musculus (7)
	synthetic construct (7)
	Lama glama (5)
	Rattus norvegicus (5)
	Escherichia coli (3)
	Candida albicans (2)
	Gallus gallus (1)

Taxonomy

	Eukaryota (107)
	other sequences (7)
	Bacteria (3)

Experimental Method

X-RAY DIFFRACTION (110)

Polymer Entity Type

	Protein (110)
	DNA (2)

Refinement Resolution (Å)

	0.5 - 1.0 (1)
	1.0 - 1.5 (22)
	1.5 - 2.0 (47)
	2.0 - 2.5 (22)
	2.5 - 3.0 (8)
	3.0 - 3.5 (10)

Release Date

	1975 - 1979 (1)
	1990 - 1994 (8)
	1995 - 1999 (1)
	2000 - 2004 (4)
	2005 - 2009 (23)
	2010 - 2014 (52)
	2015 - 2019 (2)
	2025 - 2029 (19)

Enzyme Classification Name

	Hydrolases (100)
	Transferases (7)
	Isomerases (1)
	Lyases (1)

Membrane Protein Annotation

OPM (1)

Symmetry Type

	Asymmetric (104)
	Cyclic (9)

SCOP Classification

	All beta proteins (45)
	Alpha and beta proteins (a+b) (18)
	Small proteins (27)
	Alpha and beta proteins (a/b) (8)
	Artifacts (5)
	All alpha proteins (1)

AllSelected

1 to 25 of 110 Structures

Page 1 of 5

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1DAN \| pdb_00001dan	Download File View File

Complex of active site inhibited human blood coagulation factor VIIA with human recombinant soluble tissue factor

Banner, D.W.

(1996) Nature 380: 41-46

Released	1997-09-04
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	BLOOD COAGULATION FACTOR VIIA heavy chain (protein) BLOOD COAGULATION FACTOR VIIA light chain (protein) SOLUBLE TISSUE FACTOR (protein)
Unique Ligands	0Z6, BGC, CA, CAC, CL, FUC

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1DWB \| pdb_00001dwb	Download File View File

CRYSTALLOGRAPHIC ANALYSIS AT 3.0-ANGSTROMS RESOLUTION OF THE BINDING TO HUMAN THROMBIN OF FOUR ACTIVE SITE-DIRECTED INHIBITORS

Banner, D.W., Hadvary, P.

(1991) J Biological Chem 266: 20085-20093

Released	1994-01-31
Method	X-RAY DIFFRACTION 3.16 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	ALPHA-THROMBIN (LARGE SUBUNIT) (protein) ALPHA-THROMBIN (SMALL SUBUNIT) (protein) HIRUDIN IIIA (protein)
Unique Ligands	BEN

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1DWC \| pdb_00001dwc	Download File View File

CRYSTALLOGRAPHIC ANALYSIS AT 3.0-ANGSTROMS RESOLUTION OF THE BINDING TO HUMAN THROMBIN OF FOUR ACTIVE SITE-DIRECTED INHIBITORS

Banner, D.W., Hadvary, P.

(1991) J Biological Chem 266: 20085-20093

Released	1994-01-31
Method	X-RAY DIFFRACTION 3 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	ALPHA-THROMBIN (LARGE SUBUNIT) (protein) ALPHA-THROMBIN (SMALL SUBUNIT) (protein) HIRUDIN IIIA (protein)
Unique Ligands	MIT

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1DWD \| pdb_00001dwd	Download File View File

CRYSTALLOGRAPHIC ANALYSIS AT 3.0-ANGSTROMS RESOLUTION OF THE BINDING TO HUMAN THROMBIN OF FOUR ACTIVE SITE-DIRECTED INHIBITORS

Banner, D.W., Hadvary, P.

(1991) J Biological Chem 266: 20085-20093

Released	1994-01-31
Method	X-RAY DIFFRACTION 3 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	ALPHA-THROMBIN (LARGE SUBUNIT) (protein) ALPHA-THROMBIN (SMALL SUBUNIT) (protein) HIRUDIN IIIA (protein)
Unique Ligands	MID

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1DWE \| pdb_00001dwe	Download File View File

Crystallographic analysis at 3.0-Angstroms resolution of the binding to human thrombin of four active site-directed inhibitors

Banner, D.W., Hadvary, P.

(1991) J Biological Chem 266: 20085-20093

Released	1994-01-31
Method	X-RAY DIFFRACTION 3 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	ALPHA-THROMBIN heavy chain (protein) ALPHA-THROMBIN light chain (protein) HIRUDIN IIIA (protein)
Unique Ligands	0G6

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1IYK \| pdb_00001iyk	Download File View File

Crystal structure of candida albicans N-myristoyltransferase with myristoyl-COA and peptidic inhibitor

Sogabe, S., Fukami, T.A., Morikami, K., Shiratori, Y., Aoki, Y., D'Arcy, A., Winkler, F.K., Banner, D.W., Ohtsuka, T.

(2002) Chem Biol 9: 1119-1128

Released	2002-12-30
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Candida albicans
Macromolecule	MYRISTOYL-COA:PROTEIN N-MYRISTOYLTRANSFERASE (protein)
Unique Ligands	MIM, MYA

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1IYL \| pdb_00001iyl	Download File View File

Crystal Structure of Candida albicans N-myristoyltransferase with Non-peptidic Inhibitor

Sogabe, S., Fukami, T.A., Morikami, K., Shiratori, Y., Aoki, Y., D'Arcy, A., Winkler, F.K., Banner, D.W., Ohtsuka, T.

(2002) Chem Biol 9: 1119-1128

Released	2002-12-30
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Candida albicans
Macromolecule	Myristoyl-CoA:Protein N-Myristoyltransferase (protein)
Unique Ligands	R64

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1KLI \| pdb_00001kli	Download File View File

Cofactor-and substrate-assisted activation of factor VIIa

Sichler, K., Banner, D.W., D'Arcy, A., Hopfner, K.P., Huber, R., Bode, W., Kresse, G.B., Kopetzki, E., Brandstetter, H.

(2002) J Mol Biology 322: 591-603

Released	2002-09-18
Method	X-RAY DIFFRACTION 1.69 Å
Organisms	Homo sapiens
Macromolecule	factor VIIa (protein)
Unique Ligands	BEN, CA, GOL, SO4

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1OYT \| pdb_00001oyt	Download File View File

COMPLEX OF RECOMBINANT HUMAN THROMBIN WITH A DESIGNED FLUORINATED INHIBITOR

Banner, D.W., Olsen, J.A.

(2003) Angew Chem Int Ed Engl 42: 2507-2511

Released	2003-06-24
Method	X-RAY DIFFRACTION 1.67 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	Hirudin IIB (protein) thrombin heavy chain (protein) thrombin light chain (protein)
Unique Ligands	CA, FSN, NA

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1ROP \| pdb_00001rop	Download File View File

STRUCTURE OF THE COL*E1 ROP PROTEIN AT 1.7 ANGSTROMS RESOLUTION

Kokkinidis, M., Banner, D.W., Tsernoglou, D.

(1987) J Mol Biology 196: 657-675

Released	1992-07-15
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Escherichia coli
Macromolecule	ROP PROTEIN (protein)

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1TIM \| pdb_00001tim	Download File View File

STRUCTURE OF TRIOSE PHOSPHATE ISOMERASE FROM CHICKEN MUSCLE

Banner, D.W., Bloomer, A.C., Petsko, G.A., Phillips, D.C., Wilson, I.A.

(1976) Biochem Biophys Res Commun 72: 146-155

Released	1976-10-15
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Gallus gallus
Macromolecule	TRIOSEPHOSPHATE ISOMERASE (protein)

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1TNR \| pdb_00001tnr	Download File View File

CRYSTAL STRUCTURE OF THE SOLUBLE HUMAN 55 KD TNF RECEPTOR-HUMAN TNF-BETA COMPLEX: IMPLICATIONS FOR TNF RECEPTOR ACTIVATION

Banner, D.W.

(1993) Cell 73: 431-445

Released	1994-07-31
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Homo sapiens
Macromolecule	TUMOR NECROSIS FACTOR BETA (protein) TUMOR NECROSIS FACTOR RECEPTOR P55 (protein)

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1VZQ \| pdb_00001vzq	Download File View File

Complex of thrombin with designed inhibitor 7165

Shaerer, K., Morgenthaler, M., Seiler, P., Diederich, F., Banner, D.W., Tschopp, T., Obst-Sander, U.

(2004) Helvetica Chim Acta 87: 2517

Released	2005-06-20
Method	X-RAY DIFFRACTION 1.54 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	HIRUDIN VARIANT-2 (protein) THROMBIN HEAVY (protein) THROMBIN LIGHT (protein)
Unique Ligands	CA, NA, SHY

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1W0Y \| pdb_00001w0y	Download File View File

tf7a_3771 complex

Banner, D.W., D'Arcy, A., Groebke-Zbinden, K., Ackermann, J., Kirchhofer, D., Ji, Y.-H., Tschopp, T.B., Wallbaum, S., Weber, L.

(2005) Bioorg Med Chem Lett 15: 817

Released	2005-01-21
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	BLOOD COAGULATION FACTOR VIIA (protein) TISSUE FACTOR (protein)
Unique Ligands	771, BGC, CA, CAC, FUC

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1W2K \| pdb_00001w2k	Download File View File

tf7a_4380 complex

Banner, D.W., D'Arcy, A., Groebke-Zbinden, K., Ackermann, J., Kirchhofer, D., Ji, Y.-H., Tschopp, T.B., Wallbaum, S., Weber, L.

(2005) Bioorg Med Chem Lett 15: 817

Released	2005-06-20
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	BLOOD COAGULATION FACTOR VIIA (protein) TISSUE FACTOR (protein)
Unique Ligands	380, BGC, CA, CAC, FUC

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1W7X \| pdb_00001w7x	Download File View File

Factor7 - 413 complex

Ackermann, J., Alig, L., Banner, D.W., Boehm, H.-J., Groebke-Zbinden, K., Hilpert, K., Lave, T., Kuehne, H., Obst-Sander, U., Riederer, M.A., Stahl, M., Tschopp, T.B., Weber, L., Wessel, H.P.

(2005) Bioorg Med Chem Lett 15: 5344

Released	2005-10-25
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	BLOOD COAGULATION FACTOR VIIA (protein)
Unique Ligands	413, CA, GOL, SO4

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1W8B \| pdb_00001w8b	Download File View File

Factor7 - 413 complex

Ackermann, J., Alig, L., Banner, D.W., Boehm, H.-J., Groebke-Zbinden, K., Hilpert, K., Lave, T., Kuehne, H., Obst-Sander, U., Riederer, M.A., Stahl, M., Tschopp, T.B., Weber, L., Wessel, H.P.

(2005) Bioorg Med Chem Lett 15: 5344

Released	2005-10-25
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	BLOOD COAGULATION FACTOR VIIA (protein)
Unique Ligands	413, CA

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2BOK \| pdb_00002bok	Download File View File

Factor Xa - cation

Morgenthaler, M., Schaerer, K., Paulini, R., Obst-Sander, U., Banner, D.W., Schlatter, D., Benz, J., Stihle, M., Diederich, F.

(2005) Angew Chem Int Ed Engl 44: 4400

Released	2005-06-16
Method	X-RAY DIFFRACTION 1.64 Å
Organisms	Homo sapiens
Macromolecule	COAGULATION FACTOR X (protein)
Unique Ligands	784, NA

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2BZ6 \| pdb_00002bz6	Download File View File

Orally available Factor7a inhibitor

Groebke-Zbinden, K., Obst-Sander, U., Hilpert, K., Kuehne, H., Banner, D.W., Boehm, H.J., Stahl, M., Ackermann, J., Alig, L., Weber, L., Wessel, H.P., Riederer, M.A., Tschopp, T.B., Lave, T.

(2006) Bioorg Med Chem 14: 5357

Released	2006-02-22
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	BLOOD COAGULATION FACTOR VIIA (protein)
Unique Ligands	346, CA, SO4

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2CF8 \| pdb_00002cf8	Download File View File

Complex of recombinant human thrombin with an inhibitor

Schweizer, E., Hoffmann-Roeder, A., Olsen, J.A., Obst-Sander, U., Wagner, B., Kansy, M., Banner, D.W., Diederich, F.

(2006) Org Biomol Chem 4: 2364

Released	2006-06-14
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	HIRUDIN IIIA (protein) THROMBIN HEAVY CHAIN (protein) THROMBIN LIGHT CHAIN (protein)
Unique Ligands	CA, ESH, NA

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2CF9 \| pdb_00002cf9	Download File View File

Complex of recombinant human thrombin with an inhibitor

Schweizer, E., Hoffmann-Roeder, A., Olsen, J.A., Obst-Sander, U., Wagner, B., Kansy, M., Banner, D.W., Diederich, F.

(2006) Org Biomol Chem 4: 2364

Released	2006-06-14
Method	X-RAY DIFFRACTION 1.79 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	HIRUDIN IIIA (protein) THROMBIN HEAVY CHAIN (protein) THROMBIN LIGHT CHAIN (protein)
Unique Ligands	348, CA, NA

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2CN0 \| pdb_00002cn0	Download File View File

Complex of Recombinant Human Thrombin with a Designed Inhibitor

Hoffmann-Roder, A., Schweizer, E., Egger, J., Seiler, P., Obst-Sander, U., Wagner, B., Kansy, M., Banner, D.W., Diederich, F.

(2006) ChemMedChem 1: 1205

Released	2006-11-06
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	HIRUDIN IIA (protein) PROTHROMBIN PRECURSOR (protein)
Unique Ligands	CA, F25, NA

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2DEB \| pdb_00002deb	Download File View File

Crystal structure of rat carnitine palmitoyltransferase 2 in space group C2221

Rufer, A.C., Thoma, R., Benz, J., Stihle, M., Gsell, B., De Roo, E., Banner, D.W., Mueller, F., Chomienne, O., Hennig, M.

(2006) Structure 14: 713-723

Released	2007-02-10
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Rattus norvegicus
Macromolecule	Carnitine O-palmitoyltransferase II, mitochondrial (protein)
Unique Ligands	BOG, COA, PLM

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2FW3 \| pdb_00002fw3	Download File View File

Crystal structure of rat carnitine palmitoyltransferase 2 in complex with antidiabetic drug ST1326

Rufer, A.C., Thoma, R., Benz, J., Stihle, M., Gsell, B., De Roo, E., Banner, D.W., Mueller, F., Chomienne, O., Hennig, M.

(2006) Structure 14: 713-723

Released	2007-02-01
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Rattus norvegicus
Macromolecule	Carnitine O-palmitoyltransferase II, mitochondrial (protein)
Unique Ligands	BUI