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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Decroly, E."

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Search Summary

This query matches 14 Structures.

Refinements

Structure Determination Methodology

experimental (14)

Scientific Name of Source Organism

	human metapneumovirus (7)
	Severe acute respiratory syndrome-related coronavirus (3)
	Human respiratory syncytial virus A2 (1)
	Lama glama (1)
	Severe acute respiratory syndrome coronavirus 2 (1)
	Sudan virus - Boniface, Sudan,1976 (1)
	Zika virus (1)
	synthetic construct (1)

Taxonomy

	Riboviria (14)
	Eukaryota (1)
	other sequences (1)

Experimental Method

	X-RAY DIFFRACTION (12)
	ELECTRON MICROSCOPY (2)

Polymer Entity Type

	Protein (14)
	RNA (1)

Refinement Resolution (Å)

	1.5 - 2.0 (1)
	2.0 - 2.5 (4)
	2.5 - 3.0 (7)
	3.0 - 3.5 (2)

Release Date

	2010 - 2014 (3)
	2015 - 2019 (8)
	2020 - 2024 (3)

Enzyme Classification Name

	Transferases (13)
	Hydrolases (2)

Symmetry Type

	Asymmetric (12)
	Cyclic (2)

SCOP Classification

	Alpha and beta proteins (a/b) (4)
	Small proteins (3)
	All beta proteins (1)
	Artifacts (1)

AllSelected

1 to 14 of 14 Structures

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2XYQ \| pdb_00002xyq	Download File View File

Crystal structure of the nsp16 nsp10 SARS coronavirus complex

Decroly, E., Debarnot, C., Ferron, F., Bouvet, M., Coutard, B., Imbert, I., Gluais, L., Papageorgiou, N., Ortiz-Lombardia, M., Lescar, J., Canard, B.

(2011) PLoS Pathog 7: 2059

Released	2011-10-19
Method	X-RAY DIFFRACTION 2 Å
Organisms	Severe acute respiratory syndrome-related coronavirus
Macromolecule	NON-STRUCTURAL PROTEIN 10 (protein) PUTATIVE 2'-O-METHYL TRANSFERASE (protein)
Unique Ligands	CL, MG, NA, SAH, ZN

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2XYR \| pdb_00002xyr	Download File View File

Crystal structure of the nsp16 nsp10 SARS coronavirus complex

Decroly, E., Debarnot, C., Ferron, F., Bouvet, M., Coutard, B., Imbert, I., Gluais, L., Papageorgiou, N., Ortiz-Lombardia, M., Lescar, J., Canard, B.

(2011) PLoS Pathog 7: 2059

Released	2011-10-26
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Severe acute respiratory syndrome-related coronavirus
Macromolecule	NON-STRUCTURAL PROTEIN 10 (protein) PUTATIVE 2'-O-METHYL TRANSFERASE (protein)
Unique Ligands	CL, MG, NA, SFG, ZN

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2XYV \| pdb_00002xyv	Download File View File

Crystal structure of the nsp16 nsp10 SARS coronavirus complex

Decroly, E., Debarnot, C., Ferron, F., Bouvet, M., Coutard, B., Imbert, I., Gluais, L., Papageorgiou, N., Ortiz-Lombardia, M., Lescar, J., Canard, B.

(2011) PLoS Pathog 7: 2059

Released	2011-10-26
Method	X-RAY DIFFRACTION 2.06 Å
Organisms	Severe acute respiratory syndrome-related coronavirus
Macromolecule	NON-STRUCTURAL PROTEIN 10 (protein) PUTATIVE 2'-O-METHYL TRANSFERASE (protein)
Unique Ligands	CL, MG, NA, SAH, ZN

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4UCI \| pdb_00004uci	Download File View File

X-ray structure and activities of an essential Mononegavirales L- protein domain

Paesen, G.C., Collet, A., Sallamand, C., Debart, F., Vasseur, J.J., Canard, B., Decroly, E., Grimes, J.M.

(2015) Nat Commun 6: 8749

Released	2015-10-14
Method	X-RAY DIFFRACTION 2.21 Å
Organisms	human metapneumovirus
Macromolecule	RNA-DIRECTED RNA POLYMERASE L (protein)
Unique Ligands	ADN, GOL, GTP, SAM, ZN

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4UCJ \| pdb_00004ucj	Download File View File

X-ray structure and activities of an essential Mononegavirales L- protein domain

Paesen, G.C., Collet, A., Sallamand, C., Debart, F., Vasseur, J.J., Canard, B., Decroly, E., Grimes, J.M.

(2015) Nat Commun 6: 8749

Released	2015-11-18
Method	X-RAY DIFFRACTION 3.26 Å
Organisms	human metapneumovirus
Macromolecule	RNA-DIRECTED RNA POLYMERASE L (protein)
Unique Ligands	SO4, ZN

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4UCK \| pdb_00004uck	Download File View File

X-ray structure and activities of an essential Mononegavirales L- protein domain

Paesen, G.C., Collet, A., Sallamand, C., Debart, F., Vasseur, J.J., Canard, B., Decroly, E., Grimes, J.M.

(2015) Nat Commun 6: 8749

Released	2015-11-18
Method	X-RAY DIFFRACTION 2.66 Å
Organisms	human metapneumovirus
Macromolecule	RNA-DIRECTED RNA POLYMERASE L (protein)
Unique Ligands	SAM, ZN

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4UCL \| pdb_00004ucl	Download File View File

X-ray structure and activities of an essential Mononegavirales L- protein domain

Paesen, G.C., Collet, A., Sallamand, C., Debart, F., Vasseur, J.J., Canard, B., Decroly, E., Grimes, J.M.

(2015) Nat Commun 6: 8749

Released	2015-11-18
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	human metapneumovirus
Macromolecule	RNA-DIRECTED RNA POLYMERASE L (protein)
Unique Ligands	SO4, ZN

Explore in 3D

4UCY \| pdb_00004ucy	Download File View File

X-ray structure and activities of an essential Mononegavirales L- protein domain

Paesen, G.C., Collet, A., Sallamand, C., Debart, F., Vasseur, J.J., Canard, B., Decroly, E., Grimes, J.M.

(2015) Nat Commun 6: 8749

Released	2015-11-18
Method	X-RAY DIFFRACTION 2.83 Å
Organisms	human metapneumovirus
Macromolecule	RNA-DIRECTED RNA POLYMERASE L (protein)
Unique Ligands	SO4, ZN

Explore in 3D

4UCZ \| pdb_00004ucz	Download File View File

X-ray structure and activities of an essential Mononegavirales L- protein domain

Paesen, G.C., Collet, A., Sallamand, C., Debart, F., Vasseur, J.J., Canard, B., Decroly, E., Grimes, J.M.

(2015) Nat Commun 6: 8749

Released	2015-11-18
Method	X-RAY DIFFRACTION 2.99 Å
Organisms	human metapneumovirus
Macromolecule	RNA-DIRECTED RNA POLYMERASE L (protein)
Unique Ligands	GMP, GTP, ZN

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4UD0 \| pdb_00004ud0	Download File View File

X-ray structure and activities of an essential Mononegavirales L- protein domain

Paesen, G.C., Collet, A., Sallamand, C., Debart, F., Vasseur, J.J., Canard, B., Decroly, E., Grimes, J.M.

(2015) Nat Commun 6: 8749

Released	2015-11-18
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	human metapneumovirus
Macromolecule	RNA-DIRECTED RNA POLYMERASE L (protein)
Unique Ligands	SAH, SO4, ZN

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5M5B \| pdb_00005m5b	Download File View File

Crystal structure of Zika virus NS5 methyltransferase

Barral, K., Ortiz Lombardia, M., Coutard, B., Decroly, E., Lichiere, J.

(2017) J Virol 91:

Released	2016-12-28
Method	X-RAY DIFFRACTION 2.01 Å
Organisms	Zika virus
Macromolecule	NS5 methyltransferase (protein)
Unique Ligands	CL, GOL, SAM, SO4

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6YU8 \| pdb_00006yu8	Download File View File

RNA Methyltransferase of Sudan Ebola Virus

Ferron, F., Valle, C., Zamboni, V., Canard, B., Decroly, E.

(2021) Nucleic Acids Res 49: 1737-1748

Released	2021-02-17
Method	X-RAY DIFFRACTION 1.841 Å
Organisms	Lama glama Sudan virus - Boniface, Sudan,1976
Macromolecule	Methyltransferase domain of the L protein (protein) VHH antiboby (protein)
Unique Ligands	CL, GOL, MG, NA, PEG

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7ED5 \| pdb_00007ed5	Download File View File

A dual mechanism of action of AT-527 against SARS-CoV-2 polymerase

Shannon, A., Fattorini, V., Sama, B., Selisko, B., Feracci, M., Falcou, C., Gauffre, P., El Kazzi, P., Delpal, A., Decroly, E., Alvarez, K., Eydoux, C., Guillemot, J.-C., Moussa, A., Good, S., Colla, P., Lin, K., Sommadossi, J.-P., Zhu, Y.X., Yan, X.D., Shi, H., Ferron, F., Canard, B.

(2022) Nat Commun 13: 621-621

Released	2022-02-16
Method	ELECTRON MICROSCOPY 2.98 Å
Organisms	Severe acute respiratory syndrome coronavirus 2 synthetic construct
Macromolecule	Non-structural protein 7 (protein) Non-structural protein 8 (protein) RNA-directed RNA polymerase (protein) RNA (5'-R(PCPCPCPCPAPUPAPAPCPUPUPAPAPUPCPUPCPAPCPAPUPAPGPC)-3') (nucleic acid) RNA (5'-R(PGPCPUPAPUPGPUPGPAPGPAPUPUPAPAPGPUPUPAPU*(AT9))-3') (nucleic acid)
Unique Ligands	AT9, MG, ZN

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8FU3 \| pdb_00008fu3	Download File View File

Structure Of Respiratory Syncytial Virus Polymerase with Novel Non-Nucleoside Inhibitor

Yu, X., Abeywickrema, P., Bonneux, B., Behera, I., Jacoby, E., Fung, A., Adhikary, S., Bhaumik, A., Carbajo, R.J., Bruyn, S.D., Miller, R., Patrick, A., Pham, Q., Piassek, M., Verheyen, N., Shareef, A., Sutto-Ortiz, P., Ysebaert, N., Vlijmen, H.V., Jonckers, T.H.M., Herschke, F., McLellan, J.S., Decroly, E., Fearns, R., Grosse, S., Roymans, D., Sharma, S., Rigaux, P., Jin, Z.

(2023) Commun Biol 6: 1074-1074

Released	2023-11-01
Method	ELECTRON MICROSCOPY 2.88 Å
Organisms	Human respiratory syncytial virus A2
Macromolecule	Phosphoprotein (protein) RNA-directed RNA polymerase L (protein)
Unique Ligands	YBK

1 to 14 of 14 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

2XYQ | pdb_00002xyq

Crystal structure of the nsp16 nsp10 SARS coronavirus complex

2XYR | pdb_00002xyr

Crystal structure of the nsp16 nsp10 SARS coronavirus complex

2XYV | pdb_00002xyv

Crystal structure of the nsp16 nsp10 SARS coronavirus complex

4UCI | pdb_00004uci

X-ray structure and activities of an essential Mononegavirales L- protein domain

4UCJ | pdb_00004ucj

X-ray structure and activities of an essential Mononegavirales L- protein domain

4UCK | pdb_00004uck

X-ray structure and activities of an essential Mononegavirales L- protein domain

4UCL | pdb_00004ucl

X-ray structure and activities of an essential Mononegavirales L- protein domain

4UCY | pdb_00004ucy

X-ray structure and activities of an essential Mononegavirales L- protein domain

4UCZ | pdb_00004ucz

X-ray structure and activities of an essential Mononegavirales L- protein domain

4UD0 | pdb_00004ud0

X-ray structure and activities of an essential Mononegavirales L- protein domain

5M5B | pdb_00005m5b

Crystal structure of Zika virus NS5 methyltransferase

6YU8 | pdb_00006yu8

RNA Methyltransferase of Sudan Ebola Virus

7ED5 | pdb_00007ed5

A dual mechanism of action of AT-527 against SARS-CoV-2 polymerase

8FU3 | pdb_00008fu3

Structure Of Respiratory Syncytial Virus Polymerase with Novel Non-Nucleoside Inhibitor

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2XYQ | pdb_00002xyq

2XYR | pdb_00002xyr

2XYV | pdb_00002xyv

4UCI | pdb_00004uci

4UCJ | pdb_00004ucj

4UCK | pdb_00004uck

4UCL | pdb_00004ucl

4UCY | pdb_00004ucy

4UCZ | pdb_00004ucz

4UD0 | pdb_00004ud0

5M5B | pdb_00005m5b

6YU8 | pdb_00006yu8

7ED5 | pdb_00007ed5

8FU3 | pdb_00008fu3