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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Dodd, F.E."

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Search Summary

This query matches 13 Structures.

Refinements

Structure Determination Methodology

experimental (13)

Scientific Name of Source Organism

Achromobacter xylosoxidans (13)

Taxonomy

Bacteria (13)

Experimental Method

X-RAY DIFFRACTION (13)

Polymer Entity Type

Protein (13)

Refinement Resolution (Å)

	1.0 - 1.5 (3)
	1.5 - 2.0 (6)
	2.0 - 2.5 (2)
	2.5 - 3.0 (1)
	3.0 - 3.5 (1)

Release Date

	1995 - 1999 (3)
	2000 - 2004 (10)

Enzyme Classification Name

Oxidoreductases (11)

Symmetry Type

	Cyclic (9)
	Asymmetric (4)

SCOP Classification

All beta proteins (13)

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1 to 13 of 13 Structures

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1DYZ \| pdb_00001dyz	Download File View File

OXIDISED AZURIN II FROM ALCALIGENES XYLOSOXIDANS

Dodd, F.E., Abraham, Z.H.L., Eady, R.R., Hasnain, S.S.

(2000) Acta Crystallogr D Biol Crystallogr 56: 690

Released	2000-07-10
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	AZURIN II (protein)
Unique Ligands	CU

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1DZ0 \| pdb_00001dz0	Download File View File

REDUCED AZURIN II FROM ALCALIGENES XYLOSOXIDANS

Dodd, F.E., Abraham, Z.H.L., Eady, R.R., Hasnain, S.S.

(2000) Acta Crystallogr D Biol Crystallogr 56: 690

Released	2000-07-04
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	AZURIN II (protein)
Unique Ligands	CU1

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1GS6 \| pdb_00001gs6	Download File View File

Crystal structure of M144A mutant of Alcaligenes xylosoxidans Nitrite Reductase

Ellis, M.J., Prudencio, M., Dodd, F.E., Strange, R.W., Sawers, G., Eady, R.R., Hasnain, S.S.

(2002) J Mol Biology 316: 51

Released	2002-02-14
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU, MG

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1GS7 \| pdb_00001gs7	Download File View File

Crystal structure of H254F mutant of Alcaligenes xylosoxidans Nitrite Reductase

Ellis, M.J., Prudencio, M., Dodd, F.E., Strange, R.W., Sawers, G., Eady, R.R., Hasnain, S.S.

(2002) J Mol Biology 316: 51

Released	2002-02-14
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU, ZN

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1GS8 \| pdb_00001gs8	Download File View File

Crystal structure of mutant D92N Alcaligenes xylosoxidans Nitrite Reductase

Ellis, M.J., Prudencio, M., Dodd, F.E., Strange, R.W., Sawers, G., Eady, R.R., Hasnain, S.S.

(2002) J Mol Biology 316: 51

Released	2002-02-14
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU, ZN

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1HAU \| pdb_00001hau	Download File View File

X-RAY STRUCTURE OF A BLUE COPPER NITRITE REDUCTASE AT HIGH PH AND IN COPPER FREE FORM AT 1.9 A RESOLUTION

Ellis, M.J., Dodd, F.E., Strange, R.W., Prudencio, M., Sawerseady, R.R., Hasnain, S.S.

(2001) Acta Crystallogr D Biol Crystallogr 57: 1110

Released	2001-08-02
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU

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1HAW \| pdb_00001haw	Download File View File

X-RAY STRUCTURE OF A BLUE COPPER NITRITE REDUCTASE AT HIGH PH AND IN COPPER FREE FORM AT 1.9 A RESOLUTION

Ellis, M.J., Dodd, F.E., Strange, R.W., Prudencio, M., Sawerseady, R.R., Hasnain, S.S.

(2001) Acta Crystallogr D Biol Crystallogr 57: 1110

Released	2001-08-02
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU1

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1NDR \| pdb_00001ndr	Download File View File

CRYSTALLOGRAPHIC STRUCTURE OF A BLUE COPPER NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS

Dodd, F.E., Hasnain, S.S., Abraham, Z.H.L., Eady, R.R., Smith, B.E.

(1997) Acta Crystallogr D Biol Crystallogr 53: 406-418

Released	1997-07-07
Method	X-RAY DIFFRACTION 3 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	NITRITE REDUCTASE (protein)
Unique Ligands	CU

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1NDS \| pdb_00001nds	Download File View File

CRYSTALLOGRAPHIC STRUCTURE OF A SUBSTRATE BOUND BLUE COPPER NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS

Dodd, F.E., Hasnain, S.S., Abraham, Z.H.L., Eady, R.R., Smith, B.E.

(1997) Acta Crystallogr D Biol Crystallogr 53: 406-418

Released	1997-07-07
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	NITRITE REDUCTASE (protein)
Unique Ligands	CU, NO2

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1NDT \| pdb_00001ndt	Download File View File

NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS

Dodd, F.E., Vanbeeumen, J., Eady, R.R., Hasnain, S.S.

(1998) J Mol Biology 282: 369-382

Released	1998-11-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	PROTEIN (NITRITE REDUCTASE) (protein)
Unique Ligands	CL, CU

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1OE1 \| pdb_00001oe1	Download File View File

Atomic Resolution Structure of the Wildtype Native Nitrite Reductase from Alcaligenes xylosoxidans

Ellis, M.J., Dodd, F.E., Hasnain, S.S.

(2003) J Mol Biology 328: 429

Released	2003-04-17
Method	X-RAY DIFFRACTION 1.04 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU, PG4

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1OE2 \| pdb_00001oe2	Download File View File

Atomic Resolution Structure of D92E Mutant of Alcaligenes xylosoxidans Nitrite Reductase

Ellis, M.J., Dodd, F.E., Sawers, G., Eady, R.R., Hasnain, S.S.

(2003) J Mol Biology 328: 429

Released	2003-04-17
Method	X-RAY DIFFRACTION 1.12 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU, PG4

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1OE3 \| pdb_00001oe3	Download File View File

Atomic resolution structure of 'Half Apo' NiR

Ellis, M.J., Dodd, F.E., Sawers, G., Eady, R.R., Hasnain, S.S.

(2003) J Mol Biology 328: 429

Released	2004-07-21
Method	X-RAY DIFFRACTION 1.15 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE (protein)
Unique Ligands	CU, PG4

1 to 13 of 13 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1DYZ | pdb_00001dyz

OXIDISED AZURIN II FROM ALCALIGENES XYLOSOXIDANS

1DZ0 | pdb_00001dz0

REDUCED AZURIN II FROM ALCALIGENES XYLOSOXIDANS

1GS6 | pdb_00001gs6

Crystal structure of M144A mutant of Alcaligenes xylosoxidans Nitrite Reductase

1GS7 | pdb_00001gs7

Crystal structure of H254F mutant of Alcaligenes xylosoxidans Nitrite Reductase

1GS8 | pdb_00001gs8

Crystal structure of mutant D92N Alcaligenes xylosoxidans Nitrite Reductase

1HAU | pdb_00001hau

X-RAY STRUCTURE OF A BLUE COPPER NITRITE REDUCTASE AT HIGH PH AND IN COPPER FREE FORM AT 1.9 A RESOLUTION

1HAW | pdb_00001haw

X-RAY STRUCTURE OF A BLUE COPPER NITRITE REDUCTASE AT HIGH PH AND IN COPPER FREE FORM AT 1.9 A RESOLUTION

1NDR | pdb_00001ndr

CRYSTALLOGRAPHIC STRUCTURE OF A BLUE COPPER NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS

1NDS | pdb_00001nds

CRYSTALLOGRAPHIC STRUCTURE OF A SUBSTRATE BOUND BLUE COPPER NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS

1NDT | pdb_00001ndt

NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS

1OE1 | pdb_00001oe1

Atomic Resolution Structure of the Wildtype Native Nitrite Reductase from Alcaligenes xylosoxidans

1OE2 | pdb_00001oe2

Atomic Resolution Structure of D92E Mutant of Alcaligenes xylosoxidans Nitrite Reductase

1OE3 | pdb_00001oe3

Atomic resolution structure of 'Half Apo' NiR

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

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Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1DYZ | pdb_00001dyz

1DZ0 | pdb_00001dz0

1GS6 | pdb_00001gs6

1GS7 | pdb_00001gs7

1GS8 | pdb_00001gs8

1HAU | pdb_00001hau

1HAW | pdb_00001haw

1NDR | pdb_00001ndr

1NDS | pdb_00001nds

1NDT | pdb_00001ndt

1OE1 | pdb_00001oe1

1OE2 | pdb_00001oe2

1OE3 | pdb_00001oe3