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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Gong, Q."

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Search Summary

This query matches 7,264 Structures.

Refinements

Structure Determination Methodology

experimental (7,264)

Scientific Name of Source Organism

	Homo sapiens (1,920)
	Gallus gallus (1,015)
	Parengyodontium album (251)
	Oryctolagus cuniculus (236)
	synthetic construct (232)
	Mus musculus (207)
	Escherichia coli (178)
	Saccharomyces cerevisiae (146)
	Escherichia coli K-12 (103)
	Rattus norvegicus (103)

More...

Taxonomy

	Eukaryota (4,611)
	Bacteria (2,022)
	Archaea (244)
	other sequences (237)
	Riboviria (203)
	Duplodnaviria (39)
	Eukaryota (eukaryotes) (32)
	unclassified sequences (30)
	Varidnaviria (14)
	Monodnaviria (12)

More...

Experimental Method

	X-RAY DIFFRACTION (7,183)
	ELECTRON CRYSTALLOGRAPHY (65)
	POWDER DIFFRACTION (13)
	NEUTRON DIFFRACTION (8)
	FIBER DIFFRACTION (1)

Polymer Entity Type

	Protein (7,075)
	DNA (279)
	RNA (137)
	NA-hybrid (3)

Refinement Resolution (Å)

	0.5 - 1.0 (27)
	1.0 - 1.5 (903)
	1.5 - 2.0 (2,434)
	2.0 - 2.5 (2,235)
	2.5 - 3.0 (1,199)
	3.0 - 3.5 (358)
	3.5 - 4.0 (59)
	4.0 - 4.5 (26)
	> 4.5 (15)

Release Date

	1975 - 1979 (8)
	1980 - 1984 (4)
	1985 - 1989 (8)
	1990 - 1994 (116)
	1995 - 1999 (318)
	2000 - 2004 (614)
	2005 - 2009 (1,008)
	2010 - 2014 (1,436)
	2015 - 2019 (1,915)
	2020 - 2024 (1,783)

More...

Enzyme Classification Name

	Hydrolases (2,359)
	Transferases (1,217)
	Oxidoreductases (858)
	Lyases (238)
	Isomerases (137)
	Ligases (140)
	Translocases (34)

Membrane Protein Annotation

	PDBTM (68)
	MemProtMD (65)
	mpstruc (36)
	OPM (46)

Symmetry Type

	Asymmetric (4,860)
	Cyclic (2,218)
	Dihedral (333)
	Icosahedral (6)
	Tetrahedral (5)
	Helical (1)

SCOP Classification

	Alpha and beta proteins (a/b) (1,549)
	Alpha and beta proteins (a+b) (1,368)
	All beta proteins (1,001)
	All alpha proteins (513)
	Artifacts (425)
	Membrane and cell surface proteins and peptides (54)
	Small proteins (75)
	Multi-domain proteins (alpha and beta) (45)
	Coiled coil proteins (10)
	Peptides (1)

AllSelected

1 to 25 of 7,264 Structures

Page 1 of 291

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118D \| pdb_0000118d	Download File View File

CRYSTAL AND MOLECULAR STRUCTURE OF D(GTGCGCAC): INVESTIGATION OF THE EFFECTS OF BASE SEQUENCE ON THE CONFORMATION OF OCTAMER DUPLEXES

Bingman, C.A., Li, X., Zon, G., Sundaralingam, M.

(1992) Biochemistry 31: 12803-12812

Released	1993-02-11
Method	X-RAY DIFFRACTION 1.64 Å
Macromolecule	DNA (5'-D(GPTPGPCPGPCPAPC)-3') (nucleic acid)

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187D \| pdb_0000187d	Download File View File

HYDRATION PATTERNS AND INTERMOLECULAR INTERACTIONS IN A-DNA CRYSTAL STRUCTURES. IMPLICATIONS FOR DNA RECOGNITION

Eisenstein, M., Shakked, Z.

(1995) J Mol Biology 248: 662-678

Released	1995-02-07
Method	X-RAY DIFFRACTION 2.25 Å
Macromolecule	DNA (5'-D(CPCPCPCPGPGPGPG)-3') (nucleic acid)

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188D \| pdb_0000188d	Download File View File

HYDRATION PATTERNS AND INTERMOLECULAR INTERACTIONS IN A-DNA CRYSTAL STRUCTURES. IMPLICATIONS FOR DNA RECOGNITION

Eisenstein, M., Shakked, Z.

(1995) J Mol Biology 248: 662-678

Released	1995-02-07
Method	X-RAY DIFFRACTION 2.2 Å
Macromolecule	DNA (5'-D(GPGPGPCPGPCPCPC)-3') (nucleic acid)

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189D \| pdb_0000189d	Download File View File

HYDRATION PATTERNS AND INTERMOLECULAR INTERACTIONS IN A-DNA CRYSTAL STRUCTURES. IMPLICATIONS FOR DNA RECOGNITION

Eisenstein, M., Shakked, Z.

(1995) J Mol Biology 248: 662-678

Released	1995-02-07
Method	X-RAY DIFFRACTION 2.1 Å
Macromolecule	DNA (5'-D(GPGPCPCPGPGPCPC)-3') (nucleic acid)

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193L \| pdb_0000193l	Download File View File

THE 1.33 A STRUCTURE OF TETRAGONAL HEN EGG WHITE LYSOZYME

Vaney, M.C., Maignan, S., Ries-Kautt, M., Ducruix, A.

(1996) Acta Crystallogr D Biol Crystallogr 52: 505-517

Released	1995-12-07
Method	X-RAY DIFFRACTION 1.33 Å
Organisms	Gallus gallus
Macromolecule	LYSOZYME (protein)
Unique Ligands	CL, NA

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194L \| pdb_0000194l	Download File View File

THE 1.40 A STRUCTURE OF SPACEHAB-01 HEN EGG WHITE LYSOZYME

Vaney, M.C., Maignan, S., Ries-Kautt, M., Ducruix, A.

(1996) Acta Crystallogr D Biol Crystallogr 52: 505-517

Released	1995-12-07
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Gallus gallus
Macromolecule	LYSOZYME (protein)
Unique Ligands	CL, NA

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1A22 \| pdb_00001a22	Download File View File

HUMAN GROWTH HORMONE BOUND TO SINGLE RECEPTOR

De Vos, A.M., Ultsch, M.

(1998) J Mol Biology 277: 1111-1128

Released	1998-04-29
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	GROWTH HORMONE (protein) GROWTH HORMONE RECEPTOR (protein)

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1A25 \| pdb_00001a25	Download File View File

C2 DOMAIN FROM PROTEIN KINASE C (BETA)

Sutton, R.B., Sprang, S.R.

(1998) Structure 6: 1395-1405

Released	1998-05-06
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Rattus norvegicus
Macromolecule	PROTEIN KINASE C (BETA) (protein)
Unique Ligands	CA, PSE

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1A5V \| pdb_00001a5v	Download File View File

ASV INTEGRASE CORE DOMAIN WITH HIV-1 INTEGRASE INHIBITOR Y3 AND MN CATION

Lubkowski, J., Yang, F., Alexandratos, J., Wlodawer, A.

(1998) Proc Natl Acad Sci U S A 95: 4831-4836

Released	1998-05-27
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Rous sarcoma virus (strain Schmidt-Ruppin)
Macromolecule	INTEGRASE (protein)
Unique Ligands	MN, Y3

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1A5W \| pdb_00001a5w	Download File View File

ASV INTEGRASE CORE DOMAIN WITH HIV-1 INTEGRASE INHIBITOR Y3

Lubkowski, J., Yang, F., Alexandratos, J., Wlodawer, A.

(1998) Proc Natl Acad Sci U S A 95: 4831-4836

Released	1998-05-27
Method	X-RAY DIFFRACTION 2 Å
Organisms	Rous sarcoma virus (strain Schmidt-Ruppin)
Macromolecule	INTEGRASE (protein)
Unique Ligands	Y3

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1A5X \| pdb_00001a5x	Download File View File

ASV INTEGRASE CORE DOMAIN WITH HIV-1 INTEGRASE INHIBITOR Y3

Lubkowski, J., Yang, F., Alexandratos, J., Wlodawer, A.

(1998) Proc Natl Acad Sci U S A 95: 4831-4836

Released	1998-05-27
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Rous sarcoma virus (strain Schmidt-Ruppin)
Macromolecule	INTEGRASE (protein)
Unique Ligands	Y3

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1A6J \| pdb_00001a6j	Download File View File

NITROGEN REGULATORY BACTERIAL PROTEIN IIA-NITROGEN

Bordo, D., Van Montfort, R., Pijning, T., Kalk, K.H., Reizer, J., Saier, M.H., Dijkstra, B.W.

(1998) J Mol Biology 279: 245-255

Released	1998-07-15
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Escherichia coli
Macromolecule	NITROGEN REGULATORY IIA PROTEIN (protein)
Unique Ligands	BME, SO4

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1A7N \| pdb_00001a7n	Download File View File

FV FRAGMENT OF MOUSE MONOCLONAL ANTIBODY D1.3 (BALB/C, IGG1, K) VARIANT FOR CHAIN L GLU81->ASP AND CHAIN H LEU312->VAL

Marks, C., Henrick, K., Winter, G.

To be published

Released	1998-04-29
Method	X-RAY DIFFRACTION 2.01 Å
Organisms	Mus musculus
Macromolecule	IGG1-KAPPA D1.3 FV (HEAVY CHAIN) (protein) IGG1-KAPPA D1.3 FV (LIGHT CHAIN) (protein)

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1A7O \| pdb_00001a7o	Download File View File

FV FRAGMENT OF MOUSE MONOCLONAL ANTIBODY D1.3 (BALB/C, IGG1, K) R96L DELETION MUTANT ON VARIANT FOR CHAIN L GLU81->ASP AND CHAIN H LEU312->VAL

Marks, C., Henrick, K., Winter, G.

To be published

Released	1998-04-29
Method	X-RAY DIFFRACTION 2 Å
Organisms	Mus musculus
Macromolecule	IGG1-KAPPA D1.3 FV (HEAVY CHAIN) (protein) IGG1-KAPPA D1.3 FV (LIGHT CHAIN) (protein)

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1A7P \| pdb_00001a7p	Download File View File

FV FRAGMENT OF MOUSE MONOCLONAL ANTIBODY D1.3 (BALB/C, IGG1, K) ENGINEERED MUTANT PRO95L->SER ON VARIANT CHAIN L GLU81->ASP AND CHAIN H LEU312->VAL

Marks, C., Henrick, K., Winter, G.

To be published

Released	1998-04-29
Method	X-RAY DIFFRACTION 2.01 Å
Organisms	Mus musculus
Macromolecule	IGG1-KAPPA D1.3 FV (HEAVY CHAIN) (protein) IGG1-KAPPA D1.3 FV (LIGHT CHAIN) (protein)
Unique Ligands	ACY

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1A7Q \| pdb_00001a7q	Download File View File

FV FRAGMENT OF MOUSE MONOCLONAL ANTIBODY D1.3 (BALB/C, IGG1, K) HIGH AFFINITY EXPRESSED VARIANT CONTAINING SER26L->GLY, ILE29L->THR, GLU81L->ASP, THR97L->SER, PRO240H->LEU, ASP258H->ALA, LYS281H->GLU, ASN283H->ASP AND LEU312H->VAL

Marks, C., Henrick, K., Winter, G.

To be published

Released	1998-04-29
Method	X-RAY DIFFRACTION 2 Å
Organisms	Mus musculus
Macromolecule	IGG1-KAPPA D1.3 FV (HEAVY CHAIN) (protein) IGG1-KAPPA D1.3 FV (LIGHT CHAIN) (protein)

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1A7R \| pdb_00001a7r	Download File View File

FV FRAGMENT OF MOUSE MONOCLONAL ANTIBODY D1.3 (BALB/C, IGG1, K) VARIANT CHAIN L GLU81->ASP

Marks, C., Henrick, K., Winter, G.

To be published

Released	1998-04-29
Method	X-RAY DIFFRACTION 2.01 Å
Organisms	Mus musculus
Macromolecule	IGG1-KAPPA D1.3 FV (HEAVY CHAIN) (protein) IGG1-KAPPA D1.3 FV (LIGHT CHAIN) (protein)

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1A8I \| pdb_00001a8i	Download File View File

SPIROHYDANTOIN INHIBITOR OF GLYCOGEN PHOSPHORYLASE

Gregoriou, M., Noble, M.E.M., Watson, K.A., Garman, E.F., Krulle, T.M., De La Fuente, C., Fleet, G.W.J., Oikonomakos, N.G., Johnson, L.N.

(1998) Protein Sci 7: 915-927

Released	1998-07-01
Method	X-RAY DIFFRACTION 1.78 Å
Organisms	Oryctolagus cuniculus
Macromolecule	GLYCOGEN PHOSPHORYLASE B (protein)
Unique Ligands	GLS

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1A8O \| pdb_00001a8o	Download File View File

HIV CAPSID C-TERMINAL DOMAIN

Gamble, T.R., Yoo, S., Vajdos, F.F., Von Schwedler, U.K., Worthylake, D.K., Wang, H., Mccutcheon, J.P., Sundquist, W.I., Hill, C.P.

(1997) Science 278: 849-853

Released	1998-10-14
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	HIV CAPSID (protein)

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1A95 \| pdb_00001a95	Download File View File

XPRTASE FROM E. COLI COMPLEXED WITH MG:CPRPP AND GUANINE

Vos, S., Parry, R.J., Burns, M.R., De Jersey, J., Martin, J.L.

(1998) J Mol Biology 282: 875-889

Released	1998-11-11
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	XANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE (protein)
Unique Ligands	BO3, GUN, MG, PCP

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1A96 \| pdb_00001a96	Download File View File

XPRTASE FROM E. COLI WITH BOUND CPRPP AND XANTHINE

Vos, S., Parry, R.J., Burns, M.R., De Jersey, J., Martin, J.L.

(1998) J Mol Biology 282: 875-889

Released	1998-11-11
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	XANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE (protein)
Unique Ligands	BO3, MG, PCP, XAN

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1A97 \| pdb_00001a97	Download File View File

XPRTASE FROM E. COLI COMPLEXED WITH GMP

Vos, S., Parry, R.J., Burns, M.R., De Jersey, J., Martin, J.L.

(1998) J Mol Biology 282: 875-889

Released	1998-11-11
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Escherichia coli
Macromolecule	XANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE (protein)
Unique Ligands	5GP, BO3

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1A9W \| pdb_00001a9w	Download File View File

HUMAN EMBRYONIC GOWER II CARBONMONOXY HEMOGLOBIN

Sutherland-Smith, A.J., Baker, H.M., Hofmann, O.M., Brittain, T., Baker, E.N.

(1998) J Mol Biology 280: 475-484

Released	1998-06-17
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	HEMOGLOBIN (ALPHA CHAIN) (protein) HEMOGLOBIN (BETA CHAIN) (protein)
Unique Ligands	CMO, HEM

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1AA5 \| pdb_00001aa5	Download File View File

VANCOMYCIN

Loll, P.J., Bevivino, A.E., Korty, B.D., Axelsen, P.H.

(1997) J Am Chem Soc 119: 1516

Released	1997-08-20
Method	X-RAY DIFFRACTION 0.89 Å
Organisms	Amycolatopsis orientalis
Macromolecule	VANCOMYCIN (protein)
Unique Ligands	ACY, CL
Unique branched monosaccharides	BGC, RER