RCSB PDB: Search

1AHK \| pdb_00001ahk	Download File View File

DER F 2, THE MAJOR MITE ALLERGEN FROM DERMATOPHAGOIDES FARINAE, NMR, MINIMIZED AVERAGE STRUCTURE

Ichikawa, S., Hatanaka, H., Yuuki, T., Iwamoto, N., Ogura, K., Okumura, Y., Inagaki, F.

(1998) J Biological Chem 273: 356-360

Released	1998-04-08
Method	SOLUTION NMR
Organisms	Dermatophagoides farinae
Macromolecule	DER F 2 (protein)

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1AHM \| pdb_00001ahm	Download File View File

DER F 2, THE MAJOR MITE ALLERGEN FROM DERMATOPHAGOIDES FARINAE, NMR, 10 STRUCTURES

Ichikawa, S., Hatanaka, H., Yuuki, T., Iwamoto, N., Ogura, K., Okumura, Y., Inagaki, F.

(1998) J Biological Chem 273: 356-360

Released	1998-04-08
Method	SOLUTION NMR
Organisms	Dermatophagoides farinae
Macromolecule	DER F 2 (protein)

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1AK6 \| pdb_00001ak6	Download File View File

DESTRIN, NMR, MINIMIZED AVERAGE STRUCTURE

Hatanaka, H., Moriyama, K., Ogura, K., Ichikawa, S., Yahara, I., Inagaki, F.

(1996) Cell 85: 1047-1055

Released	1997-11-12
Method	SOLUTION NMR
Organisms	Homo sapiens Sus scrofa
Macromolecule	DESTRIN (protein)

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1AK7 \| pdb_00001ak7	Download File View File

DESTRIN, NMR, 20 STRUCTURES

Hatanaka, H., Moriyama, K., Ogura, K., Ichikawa, S., Yahara, I., Inagaki, F.

(1996) Cell 85: 1047-1055

Released	1997-10-15
Method	SOLUTION NMR
Organisms	Sus scrofa
Macromolecule	DESTRIN (protein)

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1BOM \| pdb_00001bom	Download File View File

THREE-DIMENSIONAL STRUCTURE OF BOMBYXIN-II, AN INSULIN-RELATED BRAIN-SECRETORY PEPTIDE OF THE SILKMOTH BOMBYX MORI: COMPARISON WITH INSULIN AND RELAXIN

Nagata, K., Hatanaka, H., Kohda, D., Inagaki, F.

(1995) J Mol Biology 253: 749-758

Released	1994-11-01
Method	SOLUTION NMR
Organisms	Bombyx mori
Macromolecule	BOMBYXIN-II,BOMBYXIN A-2 (protein) BOMBYXIN-II,BOMBYXIN A-6 (protein)

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1BON \| pdb_00001bon	Download File View File

THREE-DIMENSIONAL STRUCTURE OF BOMBYXIN-II, AN INSULIN-RELATED BRAIN-SECRETORY PEPTIDE OF THE SILKMOTH BOMBYX MORI: COMPARISON WITH INSULIN AND RELAXIN

Nagata, K., Hatanaka, H., Kohda, D., Inagaki, F., Structural Proteomics in Europe (SPINE)

(1995) J Mol Biology 253: 749-758

Released	1995-01-26
Method	SOLUTION NMR
Organisms	Bombyx mori
Macromolecule	BOMBYXIN-II,BOMBYXIN A-2 (protein) BOMBYXIN-II,BOMBYXIN A-6 (protein)

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1D4M \| pdb_00001d4m	Download File View File

THE CRYSTAL STRUCTURE OF COXSACKIEVIRUS A9 TO 2.9 A RESOLUTION

Hendry, E., Hatanaka, H., Fry, E., Smyth, M., Tate, J., Stanway, G., Santti, J., Maaronen, M., Hyypia, T., Stuart, D.

(1999) Structure 7: 1527-1538

Released	1999-12-23
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Coxsackievirus A9
Macromolecule	PROTEIN (COXSACKIEVIRUS A9) (protein)
Unique Ligands	MYR, W71

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1ERA \| pdb_00001era	Download File View File

TERTIARY STRUCTURE OF ERABUTOXIN B IN AQUEOUS SOLUTION ELUCIDATED BY TWO-DIMENSIONAL NUCLEAR MAGNETIC RESONANCE

Hatanaka, H., Kohda, D., Inagaki, F.

(1994) J Mol Biology 240: 155-166

Released	1994-06-22
Method	SOLUTION NMR
Organisms	Laticauda semifasciata
Macromolecule	ERABUTOXIN B (protein)

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1FRA \| pdb_00001fra	Download File View File

TERTIARY STRUCTURE OF ERABUTOXIN B IN AQUEOUS SOLUTION ELUCIDATED BY TWO-DIMENSIONAL NUCLEAR MAGNETIC RESONANCE

Hatanaka, H., Kohda, D., Inagaki, F.

(1994) J Mol Biology 240: 155-166

Released	1994-06-22
Method	SOLUTION NMR
Organisms	Laticauda semifasciata
Macromolecule	ERABUTOXIN B (protein)

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1GFC \| pdb_00001gfc	Download File View File

SOLUTION STRUCTURE AND LIGAND-BINDING SITE OF THE C-TERMINAL SH3 DOMAIN OF GRB2

Kohda, D., Terasawa, H., Hatanaka, H., Inagaki, F.

(1994) Structure 2: 1029-1040

Released	1994-08-31
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2 (protein)

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1GFD \| pdb_00001gfd	Download File View File

SOLUTION STRUCTURE AND LIGAND-BINDING SITE OF THE C-TERMINAL SH3 DOMAIN OF GRB2

Kohda, D., Terasawa, H., Hatanaka, H., Inagaki, F.

(1994) Structure 2: 1029-1040

Released	1994-08-31
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2 (protein)

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1HEK \| pdb_00001hek	Download File View File

Crystal structure of equine infectious anaemia virus matrix antigen (EIAV MA)

Hatanaka, H., Iourin, O., Rao, Z., Fry, E., Kingsman, A., Stuart, D.I.

(2002) J Virol 76: 1876

Released	2001-11-23
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Equine infectious anemia virus
Macromolecule	GAG POLYPROTEIN, CORE PROTEIN P15 (protein)

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1HRE \| pdb_00001hre	Download File View File

SOLUTION STRUCTURE OF THE EPIDERMAL GROWTH FACTOR-LIKE DOMAIN OF HEREGULIN-ALPHA, A LIGAND FOR P180ERB4

Nagata, K., Kohda, D., Hatanaka, H., Ichikawa, S., Inagaki, F.

(1994) EMBO J 13: 3517-3523

Released	1994-10-15
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	HEREGULIN ALPHA (protein)

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1HRF \| pdb_00001hrf	Download File View File

SOLUTION STRUCTURE OF THE EPIDERMAL GROWTH FACTOR-LIKE DOMAIN OF HEREGULIN-ALPHA, A LIGAND FOR P180ERB4

Nagata, K., Kohda, D., Hatanaka, H., Ichikawa, S., Inagaki, F.

(1994) EMBO J 13: 3517-3523

Released	1994-10-15
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	HEREGULIN ALPHA (protein)

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1HSQ \| pdb_00001hsq	Download File View File

SOLUTION STRUCTURE OF THE SH3 DOMAIN OF PHOSPHOLIPASE CGAMMA

Kohda, D., Hatanaka, H., Odaka, M., Inagaki, F.

(1993) Cell 72: 953-960

Released	1994-08-31
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	PHOSPHOLIPASE C-GAMMA (SH3 DOMAIN) (protein)

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1IO6 \| pdb_00001io6	Download File View File

GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2 (GRB2) C-TERMINAL SH3 DOMAIN COMPLEXED WITH A LIGAND PEPTIDE (NMR, MINIMIZED MEAN STRUCTURE)

Kawasaki, M., Ogura, K., Hatanaka, H., Inagaki, F.

To be published

Released	2001-02-14
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	A LIGAND PEPTIDE (protein) GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2 (protein)

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1IP9 \| pdb_00001ip9	Download File View File

SOLUTION STRUCTURE OF THE PB1 DOMAIN OF BEM1P

Terasawa, H., Noda, Y., Ito, T., Hatanaka, H., Ichikawa, S., Ogura, K., Sumimoto, H., Inagaki, F.

(2001) EMBO J 20: 3947-3956

Released	2001-08-15
Method	SOLUTION NMR
Organisms	Saccharomyces cerevisiae
Macromolecule	BEM1 PROTEIN (protein)

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1IPG \| pdb_00001ipg	Download File View File

SOLUTION STRUCTURE OF THE PB1 DOMAIN OF BEM1P

Terasawa, H., Noda, Y., Ito, T., Hatanaka, H., Ichikawa, S., Ogura, K., Sumimoto, H., Inagaki, F.

(2001) EMBO J 20: 3947-3956

Released	2001-08-15
Method	SOLUTION NMR
Organisms	Saccharomyces cerevisiae
Macromolecule	BEM1 PROTEIN (protein)

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1J03 \| pdb_00001j03	Download File View File

Solution structure of a putative steroid-binding protein from Arabidopsis

Suzuki, S., Hatanaka, H., Kigawa, T., Terada, T., Shirouzu, M., Seki, M., Shinozaki, K., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2003-12-16
Method	SOLUTION NMR
Organisms	Arabidopsis thaliana
Macromolecule	putative steroid binding protein (protein)

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1J1H \| pdb_00001j1h	Download File View File

Solution structure of a tmRNA-binding protein, SmpB, from Thermus thermophilus

Someya, T., Nameki, N., Hosoi, H., Suzuki, S., Hatanaka, H., Fujii, M., Terada, T., Shirouzu, M., Inoue, Y., Shibata, T., Kuramitsu, S., Yokoyama, S., Kawai, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

(2003) FEBS Lett 535: 94-100

Released	2003-02-11
Method	SOLUTION NMR
Organisms	Thermus thermophilus
Macromolecule	Small Protein B (protein)

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1K1Z \| pdb_00001k1z	Download File View File

Solution structure of N-terminal SH3 domain mutant(P33G) of murine Vav

Ogura, K., Nagata, K., Horiuchi, M., Ebisui, E., Hasuda, T., Yuzawa, S., Nishida, M., Hatanaka, H., Inagaki, F.

(2002) J Biomol NMR 22: 37-46

Released	2001-10-10
Method	SOLUTION NMR
Organisms	Mus musculus
Macromolecule	vav (protein)

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1MG8 \| pdb_00001mg8	Download File View File

NMR structure of ubiquitin-like domain in murine Parkin

Tashiro, M., Okubo, S., Shimotakahara, S., Hatanaka, H., Yasuda, H., Kainosho, M., Yokoyama, S., Shindo, H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

(2003) J Biomol NMR 25: 153-156

Released	2003-04-08
Method	SOLUTION NMR
Organisms	Mus musculus
Macromolecule	Parkin (protein)

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1MKC \| pdb_00001mkc	Download File View File

C-TERMINAL DOMAIN OF MIDKINE

Iwasaki, W., Nagata, K., Hatanaka, H., Ogura, K., Inui, T., Kimura, T., Muramatsu, T., Yoshida, K., Tasumi, M., Inagaki, F.

(1997) EMBO J 16: 6936-6946

Released	1999-03-23
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	PROTEIN (MIDKINE) (protein)

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1MKN \| pdb_00001mkn	Download File View File

N-TERMINAL HALF OF MIDKINE

Iwasaki, W., Nagata, K., Hatanaka, H., Ogura, K., Inui, T., Kimura, T., Muramatsu, T., Yoshida, K., Tasumi, M., Inagaki, F.

(1997) EMBO J 16: 6936-6946

Released	1999-03-23
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	PROTEIN (MIDKINE) (protein)

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1UFM \| pdb_00001ufm	Download File View File

Solution structure of the PCI domain

Suzuki, S., Hatanaka, H., Kigawa, T., Shirouzu, M., Hayashizaki, Y., The RIKEN Genome Exploration Research Group Phase I & II Teams, Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2004-06-29
Method	SOLUTION NMR
Organisms	Mus musculus
Macromolecule	COP9 complex subunit 4 (protein)

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

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Enzyme Classification Name

Symmetry Type

SCOP Classification

1AHK | pdb_00001ahk

1AHM | pdb_00001ahm

1AK6 | pdb_00001ak6

1AK7 | pdb_00001ak7

1BOM | pdb_00001bom

1BON | pdb_00001bon

1D4M | pdb_00001d4m

1ERA | pdb_00001era

1FRA | pdb_00001fra

1GFC | pdb_00001gfc

1GFD | pdb_00001gfd

1HEK | pdb_00001hek

1HRE | pdb_00001hre

1HRF | pdb_00001hrf

1HSQ | pdb_00001hsq

1IO6 | pdb_00001io6

1IP9 | pdb_00001ip9

1IPG | pdb_00001ipg

1J03 | pdb_00001j03

1J1H | pdb_00001j1h

1K1Z | pdb_00001k1z

1MG8 | pdb_00001mg8

1MKC | pdb_00001mkc

1MKN | pdb_00001mkn

1UFM | pdb_00001ufm