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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Huang, L."

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Search Summary

This query matches 272 Structures.

Refinements

Structure Determination Methodology

experimental (272)

Scientific Name of Source Organism

	Homo sapiens (110)
	Gallus gallus (15)
	Caldanaerobacter subterraneus subsp. tengcongensis (13)
	Haloarcula marismortui (11)
	synthetic construct (11)
	Gloeobacter violaceus (10)
	Saccharolobus solfataricus P2 (10)
	Candidatus Koribacter versatilis Ellin345 (9)
	Roseobacter sp. (7)
	Thermobifida fusca (7)

More...

Taxonomy

	Eukaryota (145)
	Bacteria (69)
	Archaea (31)
	other sequences (11)
	Duplodnaviria (7)
	Monodnaviria (2)
	Viruses incertae sedis (2)

Experimental Method

	X-RAY DIFFRACTION (253)
	ELECTRON MICROSCOPY (17)
	SOLUTION NMR (2)

Polymer Entity Type

	Protein (168)
	RNA (116)
	DNA (11)

Refinement Resolution (Å)

	1.0 - 1.5 (13)
	1.5 - 2.0 (83)
	2.0 - 2.5 (77)
	2.5 - 3.0 (54)
	3.0 - 3.5 (28)
	3.5 - 4.0 (12)
	4.0 - 4.5 (1)
	> 4.5 (2)

Release Date

	1995 - 1999 (7)
	2000 - 2004 (5)
	2005 - 2009 (22)
	2010 - 2014 (28)
	2015 - 2019 (57)
	2020 - 2024 (47)
	2025 - 2029 (106)

Enzyme Classification Name

	Oxidoreductases (17)
	Hydrolases (97)
	Translocases (13)
	Transferases (6)
	Isomerases (4)
	Ligases (4)
	Lyases (1)

Membrane Protein Annotation

	PDBTM (15)
	MemProtMD (12)
	OPM (4)
	mpstruc (2)

Symmetry Type

	Asymmetric (136)
	Cyclic (29)
	Dihedral (3)
	Icosahedral (2)

SCOP Classification

	Membrane and cell surface proteins and peptides (14)
	Alpha and beta proteins (a+b) (21)
	All beta proteins (14)
	All alpha proteins (15)
	Alpha and beta proteins (a/b) (2)
	Artifacts (1)

AllSelected

1 to 25 of 272 Structures

Page 1 of 11

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1BCC \| pdb_00001bcc	Download File View File

CYTOCHROME BC1 COMPLEX FROM CHICKEN

Zhang, Z., Huang, L., Shulmeister, V.M., Chi, Y.-I., Kim, K.K., Hung, L.-W., Crofts, A.R., Berry, E.A., Kim, S.-H.

(1998) Nature 392: 677-684

Released	1998-08-19
Method	X-RAY DIFFRACTION 3.16 Å
Organisms	Gallus gallus
Macromolecule	Unique protein chains: 10
Unique Ligands	BOG, FES, HEM, PEE, U10

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1C4Z \| pdb_00001c4z	Download File View File

STRUCTURE OF AN E6AP-UBCH7 COMPLEX: INSIGHTS INTO THE UBIQUITINATION PATHWAY

Huang, L., Kinnucan, E., Wang, G., Beaudenon, S., Howley, P.M., Huibregtse, J.M., Pavletich, N.P.

(1999) Science 286: 1321-1326

Released	1999-11-17
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	UBIQUITIN CONJUGATING ENZYME E2 (protein) UBIQUITIN-PROTEIN LIGASE E3A (protein)

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1D5F \| pdb_00001d5f	Download File View File

STRUCTURE OF E6AP: INSIGHTS INTO UBIQUITINATION PATHWAY

Huang, L., Kinnucan, E., Wang, G., Beaudenon, S., Howley, P.M., Huibregtse, J.M., Pavletich, N.P.

(1999) Science 286: 1321-1326

Released	1999-11-17
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	E6AP HECT CATALYTIC DOMAIN, E3 LIGASE (protein)

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1DJ0 \| pdb_00001dj0	Download File View File

THE CRYSTAL STRUCTURE OF E. COLI PSEUDOURIDINE SYNTHASE I AT 1.5 ANGSTROM RESOLUTION

Foster, P.G., Huang, L., Santi, D.V., Stroud, R.M.

(2000) Nat Struct Biol 7: 23-27

Released	2000-05-31
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Escherichia coli
Macromolecule	PSEUDOURIDINE SYNTHASE I (protein)
Unique Ligands	CL

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1DUS \| pdb_00001dus	Download File View File

MJ0882-A hypothetical protein from M. jannaschii

Hung, L., Huang, L., Kim, R., Kim, S.H., Berkeley Structural Genomics Center (BSGC)

(2002) J Struct Funct Genomics 2: 121-127

Released	2000-07-19
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	MJ0882 (protein)

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1LFD \| pdb_00001lfd	Download File View File

CRYSTAL STRUCTURE OF THE ACTIVE RAS PROTEIN COMPLEXED WITH THE RAS-INTERACTING DOMAIN OF RALGDS

Huang, L., Hofer, F., Martin, G.S., Kim, S.-H.

(1998) Nat Struct Biol 5: 422-426

Released	1999-05-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens Rattus norvegicus
Macromolecule	RALGDS (protein) RAS (protein)
Unique Ligands	GNP, MG

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1LXD \| pdb_00001lxd	Download File View File

CRYSTAL STRUCTURE OF THE RAS INTERACTING DOMAIN OF RALGDS, A GUANINE NUCLEOTIDE DISSOCIATION STIMULATOR OF RAL PROTEIN

Huang, L., Weng, X.W., Hofer, F., Martin, G.S., Kim, S.H.

(1997) Nat Struct Biol 4: 609-615

Released	1998-03-11
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Rattus norvegicus
Macromolecule	RALGDSB (protein)

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1ME3 \| pdb_00001me3	Download File View File

High Resolution Crystal Structure Analysis Of Cruzain non-covalently Bound To A Hydroxymethyl Ketone Inhibitor (II)

Brinen, L.S., Huang, L., Ellman, J.A.

(2003) Bioorg Med Chem 11: 21-29

Released	2002-12-18
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Trypanosoma cruzi
Macromolecule	Cruzipain (protein)
Unique Ligands	P10

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1ME4 \| pdb_00001me4	Download File View File

High Resolution Crystal Structure Analysis Of Cruzain non-covalently Bound To A Hydroxymethyl Ketone Inhibitor (I)

Brinen, L.S., Huang, L., Ellman, J.A.

(2003) Bioorg Med Chem 11: 21-29

Released	2002-12-18
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Trypanosoma cruzi
Macromolecule	CRUZIPAIN (protein)
Unique Ligands	T10

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1NH9 \| pdb_00001nh9	Download File View File

Crystal Structure of a DNA Binding Protein Mja10b from the hyperthermophile Methanococcus jannaschii

Wang, G., Bartlam, M., Guo, R., Yang, H., Xue, H., Liu, Y., Huang, L., Rao, Z.

(2003) Protein Sci 12: 2815-2822

Released	2003-12-23
Method	X-RAY DIFFRACTION 2 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	DNA-binding protein Alba (protein)

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1YCY \| pdb_00001ycy	Download File View File

Conserved hypothetical protein Pfu-1806301-001 from Pyrococcus furiosus

Huang, L., Liu, Z.-J., Lee, D., Tempel, W., Chang, J., Zhao, M., Habel, J., Xu, H., Chen, L., Nguyen, D., Chang, S.-H., Horanyi, P., Florence, Q., Zhou, W., Lin, D., Zhang, H., Praissman, J., Jenney Jr., F.E., Adams, M.W.W., Rose, J.P., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)

To be published

Released	2005-02-22
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Pyrococcus furiosus
Macromolecule	Conserved hypothetical protein (protein)

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1YQ3 \| pdb_00001yq3	Download File View File

Avian respiratory complex ii with oxaloacetate and ubiquinone

Huang, L., Cobessi, D., Tung, E.Y., Berry, E.A.

(2006) J Biological Chem 281: 5965-5972

Released	2005-12-20
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Gallus gallus
Macromolecule	SUCCINATE DEHYDROGENASE CYTOCHROME B, LARGE SUBUNIT (protein) SUCCINATE DEHYDROGENASE CYTOCHROME B, SMALL SUBUNIT (protein) Succinate dehydrogenase flavoprotein subunit (protein) succinate dehydrogenase Ip subunit (protein)
Unique Ligands	F3S, FAD, FES, GOL, HEM, JZR, PEE, SF4, TEO, UNL, UQ

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1YQ4 \| pdb_00001yq4	Download File View File

Avian respiratory complex ii with 3-nitropropionate and ubiquinone

Huang, L., Sun, G., Cobessi, D., Wang, A., Shen, J.T., Tung, E.Y., Anderson, V.E., Berry, E.A.

(2006) J Biological Chem 281: 5965-5972

Released	2005-12-20
Method	X-RAY DIFFRACTION 2.33 Å
Organisms	Gallus gallus
Macromolecule	SUCCINATE DEHYDROGENASE CYTOCHROME B, LARGE SUBUNIT (protein) SUCCINATE DEHYDROGENASE CYTOCHROME B, SMALL SUBUNIT (protein) Succinate dehydrogenase flavoprotein subunit (protein) succinate dehydrogenase Ip subunit (protein)
Unique Ligands	3NP, F3S, FAD, FES, GOL, HEM, JZR, PEE, SF4, UQ

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2BCC \| pdb_00002bcc	Download File View File

STIGMATELLIN-BOUND CYTOCHROME BC1 COMPLEX FROM CHICKEN

Zhang, Z., Huang, L., Shulmeister, V.M., Chi, Y.I., Kim, K.K., Hung, L.W., Crofts, A.R., Berry, E.A., Kim, S.H.

(1998) Nature 392: 677-684

Released	1999-08-02
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Gallus gallus
Macromolecule	Unique protein chains: 10
Unique Ligands	BOG, FES, HEM, PEE, SIG, U10

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2JTM \| pdb_00002jtm	Download File View File

Solution structure of Sso6901 from Sulfolobus solfataricus P2

Feng, Y., Guo, L., Huang, L., Wang, J.

(2008) Nucleic Acids Res 36: 1129-1137

Released	2008-04-29
Method	SOLUTION NMR
Organisms	Saccharolobus solfataricus
Macromolecule	Putative uncharacterized protein (protein)

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2KKE \| pdb_00002kke	Download File View File

Solution NMR Structure of a dimeric protein of unknown function from Methanobacterium thermoautotrophicum, Northeast Structural Genomics Consortium Target TR5

Swapna, G.V.T., Gunsalus, X., Huang, L., Xiao, K., Everett, J.K., Acton, T.B., Montelione, G.T., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2009-07-14
Method	SOLUTION NMR
Organisms	Methanothermobacter thermautotrophicus str. Delta H
Macromolecule	Uncharacterized protein (protein)

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2OJU \| pdb_00002oju	Download File View File

X-ray structure of complex of human cyclophilin J with cyclosporin A

Xia, Z., Huang, L.

To be published

Released	2008-01-22
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens Tolypocladium inflatum
Macromolecule	CYCLOSPORIN A (protein) PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 3 (protein)

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3BCC \| pdb_00003bcc	Download File View File

STIGMATELLIN AND ANTIMYCIN BOUND CYTOCHROME BC1 COMPLEX FROM CHICKEN

Zhang, Z., Huang, L., Shulmeister, V.M., Chi, Y.-I., Kim, K.K., Hung, L.-W., Crofts, A.R., Berry, E.A., Kim, S.-H.

(1998) Nature 392: 677-684

Released	1998-08-19
Method	X-RAY DIFFRACTION 3.7 Å
Organisms	Gallus gallus
Macromolecule	Unique protein chains: 10
Unique Ligands	AMY, FES, HEM, SIG

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3CWB \| pdb_00003cwb	Download File View File

Chicken Cytochrome BC1 Complex inhibited by an iodinated analogue of the polyketide Crocacin-D

Huang, L., Cromartie, T., Viner, R., Crowley, P.J., Berry, E.A.

(2008) Bioorg Med Chem 16: 10345-10355

Released	2008-08-12
Method	X-RAY DIFFRACTION 3.51 Å
Organisms	Gallus gallus
Macromolecule	Unique protein chains: 10
Unique Ligands	AZI, BOG, CDL, FES, HEC, HEM, ICX, PEE, UNL, UQ