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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Jiang, Y."

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Search Summary

This query matches 379 Structures.

Refinements

Structure Determination Methodology

experimental (379)

Scientific Name of Source Organism

	Homo sapiens (178)
	Mus musculus (57)
	synthetic construct (53)
	Bos taurus (30)
	Rattus norvegicus (28)
	Escherichia coli (23)
	Priestia megaterium NBRC 15308 = ATCC 14581 (22)
	Bacillus cereus (19)
	Arabidopsis thaliana (18)
	Severe acute respiratory syndrome coronavirus 2 (18)

More...

Taxonomy

	Eukaryota (250)
	Bacteria (125)
	other sequences (53)
	Riboviria (35)
	Archaea (11)
	Duplodnaviria (4)

Experimental Method

	ELECTRON MICROSCOPY (207)
	X-RAY DIFFRACTION (160)
	SOLUTION NMR (12)

Polymer Entity Type

	Protein (379)
	RNA (10)

Refinement Resolution (Å)

	1.0 - 1.5 (8)
	1.5 - 2.0 (78)
	2.0 - 2.5 (42)
	2.5 - 3.0 (93)
	3.0 - 3.5 (103)
	3.5 - 4.0 (35)
	4.0 - 4.5 (3)
	> 4.5 (5)

Release Date

	1995 - 1999 (2)
	2000 - 2004 (4)
	2005 - 2009 (21)
	2010 - 2014 (49)
	2015 - 2019 (71)
	2020 - 2024 (230)
	2025 - 2029 (2)

Enzyme Classification Name

	Hydrolases (103)
	Oxidoreductases (40)
	Transferases (28)
	Ligases (4)

Membrane Protein Annotation

	PDBTM (211)
	mpstruc (158)
	OPM (136)
	MemProtMD (140)

Symmetry Type

	Asymmetric (247)
	Cyclic (121)
	Icosahedral (8)
	Dihedral (4)

SCOP Classification

	Alpha and beta proteins (a/b) (13)
	All beta proteins (28)
	Alpha and beta proteins (a+b) (11)
	Artifacts (13)
	Membrane and cell surface proteins and peptides (5)
	All alpha proteins (8)
	Multi-domain proteins (alpha and beta) (4)

AllSelected

1 to 25 of 379 Structures

Page 1 of 16

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1AIP \| pdb_00001aip	Download File View File

EF-TU EF-TS COMPLEX FROM THERMUS THERMOPHILUS

Wang, Y., Jiang, Y., Meyering-Voss, M., Sprinzl, M., Sigler, P.B.

(1997) Nat Struct Biol 4: 650-656

Released	1997-10-22
Method	X-RAY DIFFRACTION 3 Å
Organisms	Thermus thermophilus
Macromolecule	ELONGATION FACTOR TS (protein) ELONGATION FACTOR TU (protein)

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1ID1 \| pdb_00001id1	Download File View File

CRYSTAL STRUCTURE OF THE RCK DOMAIN FROM E.COLI POTASSIUM CHANNEL

Jiang, Y., Pico, A., Cadene, M., Chait, B.T., MacKinnon, R.

(2001) Neuron 29: 593-601

Released	2001-04-11
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Escherichia coli
Macromolecule	PUTATIVE POTASSIUM CHANNEL PROTEIN (protein)

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1LNQ \| pdb_00001lnq	Download File View File

CRYSTAL STRUCTURE OF MTHK AT 3.3 A

Jiang, Y., Lee, A., Chen, J., Cadene, M., Chait, B.T., Mackinnon, R.

(2002) Nature 417: 515-522

Released	2002-06-19
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	POTASSIUM CHANNEL RELATED PROTEIN (protein)
Unique Ligands	CA

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1ORQ \| pdb_00001orq	Download File View File

X-ray structure of a voltage-dependent potassium channel in complex with an Fab

Jiang, Y., Lee, A., Chen, J., Ruta, V., Cadene, M., Chait, B.T., MacKinnon, R.

(2003) Nature 423: 33-41

Released	2003-05-06
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Aeropyrum pernix Mus musculus
Macromolecule	6E1 Fab heavy chain (protein) 6E1 Fab light chain (protein) potassium channel (protein)
Unique Ligands	CD, K

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1ORS \| pdb_00001ors	Download File View File

X-ray structure of the KvAP potassium channel voltage sensor in complex with an Fab

Jiang, Y., Lee, A., Chen, J., Ruta, V., Cadene, M., Chait, B.T., MacKinnon, R.

(2003) Nature 423: 33-41

Released	2003-05-06
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Aeropyrum pernix Mus musculus
Macromolecule	33H1 Fab heavy chain (protein) 33H1 Fab light chain (protein) potassium channel (protein)

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1TFE \| pdb_00001tfe	Download File View File

DIMERIZATION DOMAIN OF EF-TS FROM T. THERMOPHILUS

Jiang, Y., Nock, S., Nesper, M., Sprinzl, M., Sigler, P.B.

(1996) Biochemistry 35: 10269-10278

Released	1996-11-08
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Thermus thermophilus
Macromolecule	ELONGATION FACTOR TS (protein)

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2AEF \| pdb_00002aef	Download File View File

Crystal Structures of the MthK RCK Domain in Ca2+ bound form

Dong, J., Shi, N., Berke, I., Chen, L., Jiang, Y.

(2005) J Biological Chem 280: 41716-41724

Released	2005-10-25
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	Calcium-gated potassium channel mthK (protein)
Unique Ligands	CA

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2AEJ \| pdb_00002aej	Download File View File

Crystal Structures of the MthK RCK Domain in no Ca2+ bound form

Dong, J., Shi, N., Berke, I., Chen, L., Jiang, Y.

(2005) J Biological Chem 280: 41716-41724

Released	2005-10-25
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	Calcium-gated potassium channel mthK (protein)

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2AEM \| pdb_00002aem	Download File View File

Crystal Structures of the MthK RCK Domain

Dong, J., Shi, N., Berke, I., Chen, L., Jiang, Y.

(2005) J Biological Chem 280: 41716-41724

Released	2005-10-25
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	Calcium-gated potassium channel mthK (protein)

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2AHY \| pdb_00002ahy	Download File View File

Na+ complex of the NaK Channel

Shi, N., Ye, S., Alam, A., Chen, L., Jiang, Y.

(2006) Nature 440: 570-574

Released	2006-02-07
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Bacillus cereus
Macromolecule	Potassium channel protein (protein)
Unique Ligands	CA, NA

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2AHZ \| pdb_00002ahz	Download File View File

K+ complex of the NaK Channel

Shi, N., Ye, S., Alam, A., Chen, L., Jiang, Y.

(2006) Nature 440: 570-574

Released	2006-02-07
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Bacillus cereus
Macromolecule	Potassium channel protein (protein)
Unique Ligands	CA, K

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2FY8 \| pdb_00002fy8	Download File View File

Crystal structure of MthK rck domain in its ligand-free gating-ring form

Ye, S., Jiang, Y.

(2006) Cell 126: 1161-1173

Released	2006-09-05
Method	X-RAY DIFFRACTION 2.79 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	Calcium-gated potassium channel mthK (protein)

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2L5F \| pdb_00002l5f	Download File View File

Solution structure of the tandem WW domains from HYPA/FBP11

Jiang, Y., Hu, H.

To be published

Released	2011-05-11
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Pre-mRNA-processing factor 40 homolog A (protein)

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2LJ0 \| pdb_00002lj0	Download File View File

The third SH3 domain of R85FL

Jiang, Y., Hu, H.

To be published

Released	2012-09-05
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Sorbin and SH3 domain-containing protein 1 (protein)

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2LJ1 \| pdb_00002lj1	Download File View File

The third SH3 domain of R85FL with ataxin-7 PRR

Jiang, Y., Hu, H.

To be published

Released	2012-09-05
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Sorbin and SH3 domain-containing protein 1 (protein)

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2Q67 \| pdb_00002q67	Download File View File

Crystal Structure of Nak channel D66A mutant

Alam, A., Shi, N., Jiang, Y.

(2007) Proc Natl Acad Sci U S A 104: 15334-15339

Released	2007-10-02
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Bacillus cereus
Macromolecule	Potassium channel protein (protein)
Unique Ligands	CA, NA

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2Q68 \| pdb_00002q68	Download File View File

Crystal Structure of Nak channel D66A, S70E double mutants

Alam, A., Shi, N., Jiang, Y.

(2007) Proc Natl Acad Sci U S A 104: 15334-15339

Released	2007-10-02
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Bacillus cereus
Macromolecule	Potassium channel protein (protein)
Unique Ligands	CA, NA

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2Q69 \| pdb_00002q69	Download File View File

Crystal Structure of Nak channel D66N mutant

Alam, A., Shi, N., Jiang, Y.

(2007) Proc Natl Acad Sci U S A 104: 15334-15339

Released	2007-10-02
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Bacillus cereus
Macromolecule	Potassium channel protein (protein)
Unique Ligands	CA, NA

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2Q6A \| pdb_00002q6a	Download File View File

Crystal Structure of Nak channel D66E mutant

Alam, A., Shi, N., Jiang, Y.

(2007) Proc Natl Acad Sci U S A 104: 15334-15339

Released	2007-10-02
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Bacillus cereus
Macromolecule	Potassium channel protein (protein)
Unique Ligands	CA, NA

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2YOJ \| pdb_00002yoj	Download File View File

HCV NS5B polymerase complexed with pyridonylindole compound

Chen, K.X., Venkatraman, S., Anilkumar, G.N., Zeng, Q., Lesburg, C.A., Vibulbhan, B., Yang, W., Velazquez, F., Chan, T.-Y., Bennett, F., Sannigrahi, M., Jiang, Y., Duca, J.S., Pinto, P., Gavalas, S., Huang, Y., Wu, W., Selyutin, O., Agrawal, S., Feld, B., Huang, H.-C., Li, C., Cheng, K.-C., Shih, N.-Y., Kozlowski, J.A., Rosenblum, S.B., Njoroge, F.G.

(2014) ACS Med Chem Lett 5: 244

Released	2013-10-09
Method	X-RAY DIFFRACTION 1.76 Å
Organisms	Hepacivirus hominis
Macromolecule	RNA-DIRECTED RNA POLYMERASE (protein)
Unique Ligands	8Y6, PO4

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3E83 \| pdb_00003e83	Download File View File

Crystal Structure of the the open NaK channel pore

Jiang, Y., Alam, A.

(2009) Nat Struct Mol Biol 16: 35-41

Released	2008-12-23
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Bacillus cereus
Macromolecule	Potassium channel protein (protein)
Unique Ligands	CS, NA

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3E86 \| pdb_00003e86	Download File View File

High resolution Crystal Structure of the open NaK channel pore

Jiang, Y., Alam, A.

(2009) Nat Struct Mol Biol 16: 30-34

Released	2008-12-23
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Bacillus cereus
Macromolecule	Potassium channel protein (protein)
Unique Ligands	CA, CS, MPD, NA

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3E89 \| pdb_00003e89	Download File View File

Crystal Structure of the the open NaK channel-low Na+ complex

Jiang, Y., Alam, A.

(2009) Nat Struct Mol Biol 16: 35-41

Released	2008-12-23
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Bacillus cereus
Macromolecule	Potassium channel protein (protein)
Unique Ligands	CS, MPD, NA

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3E8B \| pdb_00003e8b	Download File View File

Crystal Structure of the the open NaK channel- Rb+ complex

Jiang, Y., Alam, A.

(2009) Nat Struct Mol Biol 16: 35-41

Released	2008-12-23
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Bacillus cereus
Macromolecule	Potassium channel protein (protein)
Unique Ligands	MPD, RB

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3E8F \| pdb_00003e8f	Download File View File

Crystal Structure of the the open NaK channel- K+/Ba2+

Jiang, Y., Alam, A.

(2009) Nat Struct Mol Biol 16: 35-41

Released	2008-12-23
Method	X-RAY DIFFRACTION 2 Å
Organisms	Bacillus cereus
Macromolecule	Potassium channel protein (protein)
Unique Ligands	BA, K, MPD

1 to 25 of 379 Structures

Page 1 of 16

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1AIP | pdb_00001aip

1ID1 | pdb_00001id1

1LNQ | pdb_00001lnq

1ORQ | pdb_00001orq

1ORS | pdb_00001ors

1TFE | pdb_00001tfe

2AEF | pdb_00002aef

2AEJ | pdb_00002aej

2AEM | pdb_00002aem

2AHY | pdb_00002ahy

2AHZ | pdb_00002ahz

2FY8 | pdb_00002fy8

2L5F | pdb_00002l5f

2LJ0 | pdb_00002lj0

2LJ1 | pdb_00002lj1

2Q67 | pdb_00002q67

2Q68 | pdb_00002q68

2Q69 | pdb_00002q69

2Q6A | pdb_00002q6a

2YOJ | pdb_00002yoj

3E83 | pdb_00003e83

3E86 | pdb_00003e86

3E89 | pdb_00003e89

3E8B | pdb_00003e8b

3E8F | pdb_00003e8f