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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Judge, R.A."

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Search Summary

This query matches 24 Structures.

Refinements

Structure Determination Methodology

experimental (24)

Scientific Name of Source Organism

	Onion yellows phytoplasma OY-W (3)
	Ascophyllum nodosum (2)
	Escherichia coli K-12 (2)
	Homo sapiens (2)
	Leuconostoc mesenteroides (2)
	Thaumatococcus daniellii (2)
	Trichoderma reesei (2)
	Bos indicus x Bos taurus (1)
	Bos taurus (1)
	Cereibacter sphaeroides (1)

More...

Taxonomy

	Eukaryota (13)
	Bacteria (11)
	Riboviria (1)

Experimental Method

	X-RAY DIFFRACTION (23)
	ELECTRON MICROSCOPY (1)

Polymer Entity Type

Protein (24)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (3)
	2.0 - 2.5 (15)
	2.5 - 3.0 (4)

Release Date

	1990 - 1994 (1)
	1995 - 1999 (1)
	2000 - 2004 (3)
	2005 - 2009 (8)
	2010 - 2014 (1)
	2015 - 2019 (8)
	2020 - 2024 (2)

Enzyme Classification Name

	Hydrolases (6)
	Transferases (3)
	Oxidoreductases (2)

Membrane Protein Annotation

	MemProtMD (1)
	OPM (1)
	PDBTM (1)

Symmetry Type

	Asymmetric (16)
	Cyclic (6)
	Dihedral (3)

SCOP Classification

	All beta proteins (6)
	All alpha proteins (2)
	Alpha and beta proteins (a/b) (2)

AllSelected

1 to 24 of 24 Structures

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1CTP: Entity 2	Download File View File

STRUCTURE OF THE MAMMALIAN CATALYTIC SUBUNIT OF CAMP-DEPENDENT PROTEIN KINASE AND AN INHIBITOR PEPTIDE DISPLAYS AN OPEN CONFORMATION

Karlsson, R., Zheng, J., Xuong, N.H., Taylor, S.S., Sowadski, J.M.

(1993) Acta Crystallogr D Biol Crystallogr 49: 381-388

Released	1994-01-31
Method	X-RAY DIFFRACTION 2.9 Å
Chain ID	B [auth I]
Organism	Homo sapiens
Macromolecule	cAMP-dependent protein kinase inhibitor, alpha form

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1L0S: Entity 1	Download File View File

Choristoneura fumiferana (spruce budworm) antifreeze protein isoform 337

Leinala, E.K., Davies, P.L., Jia, Z.

(2002) Structure 10: 619-627

Released	2002-06-19
Method	X-RAY DIFFRACTION 2.3 Å
Chain IDs	A, B, C, D
Organism	Choristoneura fumiferana
Macromolecule	thermal hysteresis protein

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1QI9: Entity 1	Download File View File

X-RAY SIRAS STRUCTURE DETERMINATION OF A VANADIUM-DEPENDENT HALOPEROXIDASE FROM ASCOPHYLLUM NODOSUM AT 2.0 A RESOLUTION

Weyand, M., Hecht, H.-J., Kiess, M., Liaud, M.F., Vilter, H., Schomburg, D.

(1999) J Mol Biology 293: 595-611

Released	2000-06-10
Method	X-RAY DIFFRACTION 2.05 Å
Chain ID	A
Organism	Ascophyllum nodosum
Macromolecule	Vanadium-dependent bromoperoxidase

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1QI9: Entity 2	Download File View File

X-RAY SIRAS STRUCTURE DETERMINATION OF A VANADIUM-DEPENDENT HALOPEROXIDASE FROM ASCOPHYLLUM NODOSUM AT 2.0 A RESOLUTION

Weyand, M., Hecht, H.-J., Kiess, M., Liaud, M.F., Vilter, H., Schomburg, D.

(1999) J Mol Biology 293: 595-611

Released	2000-06-10
Method	X-RAY DIFFRACTION 2.05 Å
Chain ID	B
Organism	Ascophyllum nodosum
Macromolecule	Vanadium-dependent bromoperoxidase

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2AXE: Entity 1	Download File View File

IODINATED COMPLEX OF ACETYL XYLAN ESTERASE AT 1.80 ANGSTROMS

Ghosh, D., Erman, M., Sawicki, M.W., Lala, P., Weeks, D.R., Li, N., Pangborn, W., Thiel, D.J., Jornvall, H., Eyzaguirre, J.

(1999) Acta Crystallogr D Biol Crystallogr 55: 779-784

Released	1999-05-18
Method	X-RAY DIFFRACTION 1.8 Å
Chain ID	A
Organism	Talaromyces purpureogenus
Macromolecule	ACETYL XYLAN ESTERASE

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2C3V: Entity 1	Download File View File

Structure of iodinated CBM25 from Bacillus halodurans amylase

Boraston, A.B., Healey, M., Klassen, J., Ficko-Blean, E., Lammerts van Bueren, A., Law, V.

(2006) J Biological Chem 281: 587

Released	2005-10-17
Method	X-RAY DIFFRACTION 1.39 Å
Chain ID	A
Organism	Halalkalibacterium halodurans C-125
Macromolecule	ALPHA-AMYLASE G-6

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2D8O: Entity 1	Download File View File

Structure of VIL-thaumatin

Miyatake, H., Hasegawa, T., Yamano, A.

(2006) Acta Crystallogr D Biol Crystallogr 62: 280-289

Released	2006-07-11
Method	X-RAY DIFFRACTION 2.38 Å
Chain ID	A
Organism	Thaumatococcus daniellii
Macromolecule	Thaumatin I

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2D8P: Entity 1	Download File View File

Structure of HYPER-VIL-thaumatin

Miyatake, H., Hasegawa, T., Yamano, A.

(2006) Acta Crystallogr D Biol Crystallogr 62: 280-289

Released	2006-07-11
Method	X-RAY DIFFRACTION 2.3 Å
Chain ID	A
Organism	Thaumatococcus daniellii
Macromolecule	Thaumatin I

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2D8W: Entity 1	Download File View File

Structure of HYPER-VIL-trypsin

Miyatake, H., Hasegawa, T., Yamano, A.

(2006) Acta Crystallogr D Biol Crystallogr 62: 280-289

Released	2006-07-11
Method	X-RAY DIFFRACTION 2 Å
Chain ID	A
Organism	Bos taurus
Macromolecule	Cationic trypsin

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2D97: Entity 1	Download File View File

Structure of VIL-xylanase

Miyatake, H., Hasegawa, T., Yamano, A.

(2006) Acta Crystallogr D Biol Crystallogr 62: 280-289

Released	2006-07-11
Method	X-RAY DIFFRACTION 2.01 Å
Chain ID	A
Organism	Trichoderma reesei
Macromolecule	Endo-1,4-beta-xylanase 2

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2D98: Entity 1	Download File View File

Structure of VIL (extra KI/I2 added)-xylanase

Miyatake, H., Hasegawa, T., Yamano, A.

(2006) Acta Crystallogr D Biol Crystallogr 62: 280-289

Released	2006-07-11
Method	X-RAY DIFFRACTION 2 Å
Chain ID	A
Organism	Trichoderma reesei
Macromolecule	Endo-1,4-beta-xylanase 2

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2NOO: Entity 1	Download File View File

Crystal Structure of Mutant NikA

Addy, C., Ohara, M., Kawai, F., Kidera, A., Ikeguchi, M., Fuchigami, S., Osawa, M., Shimada, I., Park, S.Y., Tame, J.R.H., Heddle, J.G.

(2007) Acta Crystallogr D Biol Crystallogr 63: 221-229

Released	2007-01-23
Method	X-RAY DIFFRACTION 1.65 Å
Chain ID	A
Organism	Escherichia coli K-12
Macromolecule	Nickel-binding periplasmic protein

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2VLW: Entity 1	Download File View File

Crystal structure of the muscarinic toxin MT7 diiodoTYR51 derivative.

Menez, R., Granata, V., Mourier, G., Fruchart-Gaillard, C., Menez, A., Servant, D., Stura, E.A.

(2008) Mol Pharmacol 74: 1554

Released	2008-10-14
Method	X-RAY DIFFRACTION 1.39 Å
Chain IDs	A, B
Organism	Dendroaspis angusticeps
Macromolecule	MUSCARINIC M1-TOXIN1

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4IKM: Entity 1	Download File View File

X-ray structure of CARD8 CARD domain

Jin, T., Huang, M., Smith, P., Jiang, J., Xiao, T.

(2013) Acta Crystallogr Sect F Struct Biol Cryst Commun 69: 482-487

Released	2013-05-08
Method	X-RAY DIFFRACTION 2.4606 Å
Chain ID	A
Organism	Escherichia coli K-12 Homo sapiens
Macromolecule	Maltose-binding periplasmic protein, Caspase recruitment domain-containing protein 8

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4PGC: Entity 3	Download File View File

MHC Class I in complex with modified Sendai virus nucleoprotein peptide FAPGN(3,5-diiodotyrosine)PAL

Celie, P., Joosten, R.P., Perrakis, A., Neefjes, J.

(2015) Proc Natl Acad Sci U S A 112: 1505-1510

Released	2015-01-07
Method	X-RAY DIFFRACTION 2.3 Å
Chain IDs	C, F
Organism	Respirovirus muris
Macromolecule	Sendai virus nucleoprotein

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4TTU: Entity 1	Download File View File

N-terminally truncated dextransucrase DSR-E from Leuconostoc mesenteroides NRRL B-1299 in complex with isomaltotriose

Brison, Y., Remaud-Simeon, M., Mourey, L., Tranier, S.

(2016) J Biological Chem 291: 7527-7540

Released	2015-07-29
Method	X-RAY DIFFRACTION 2.18 Å
Chain ID	A
Organism	Leuconostoc mesenteroides
Macromolecule	Dextransucrase

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4TVC: Entity 1	Download File View File

N-terminally truncated dextransucrase DSR-E from Leuconostoc mesenteroides NRRL B-1299 in complex with gluco-oligosaccharides

Brison, Y., Remaud-Simeon, M., Mourey, L., Tranier, S.

(2016) J Biological Chem 291: 7527-7540

Released	2015-07-29
Method	X-RAY DIFFRACTION 1.85 Å
Chain ID	A
Organism	Leuconostoc mesenteroides
Macromolecule	Dextransucrase

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4TVD: Entity 1	Download File View File

N-terminally truncated dextransucrase DSR-E from Leuconostoc mesenteroides NRRL B-1299 in complex with D-glucose

Brison, Y., Remaud-Simeon, M., Mourey, L., Tranier, S.

(2016) J Biological Chem 291: 7527-7540

Released	2015-08-05
Method	X-RAY DIFFRACTION 2.3 Å
Chain ID	A
Organism	Leuconostoc mesenteroides subsp. mesenteroides
Macromolecule	Dextransucrase

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5N1C: Entity 1	Download File View File

Iodinated form of the Mycobacterium tuberculosis repressor EthR2

Wintjens, R., Wohlkonig, A.

(2017) Science 355: 1206-1211

Released	2017-04-26
Method	X-RAY DIFFRACTION 2.6 Å
Chain IDs	A, B
Organism	Mycobacterium tuberculosis H37Rv
Macromolecule	Probable transcriptional regulatory protein

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6JQA: Entity 1	Download File View File

Crystal structure of phyllogen, a phyllody inducing effector protein of phytoplasma.

Miyatake, H., Maejima, K.

(2019) Biochem Biophys Res Commun 513: 952-957

Released	2019-05-15
Method	X-RAY DIFFRACTION 2.402 Å
Chain ID	A
Organism	Onion yellows phytoplasma OY-W
Macromolecule	Phytoplasmal effector causing phyllody 1

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6JQA: Entity 2	Download File View File

Crystal structure of phyllogen, a phyllody inducing effector protein of phytoplasma.

Miyatake, H., Maejima, K.

(2019) Biochem Biophys Res Commun 513: 952-957

Released	2019-05-15
Method	X-RAY DIFFRACTION 2.402 Å
Chain IDs	B, C
Organism	Onion yellows phytoplasma OY-W
Macromolecule	Phytoplasmal effector causing phyllody 1

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6JQA: Entity 3	Download File View File

Crystal structure of phyllogen, a phyllody inducing effector protein of phytoplasma.

Miyatake, H., Maejima, K.

(2019) Biochem Biophys Res Commun 513: 952-957

Released	2019-05-15
Method	X-RAY DIFFRACTION 2.402 Å
Chain ID	D
Organism	Onion yellows phytoplasma OY-W
Macromolecule	Phytoplasmal effector causing phyllody 1