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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Lechtenberg, B.C."

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Search Summary

This query matches 33 Structures.

Refinements

Structure Determination Methodology

experimental (33)

Scientific Name of Source Organism

	Homo sapiens (30)
	synthetic construct (9)
	Severe acute respiratory syndrome coronavirus 2 (3)
	Pseudonaja textilis (2)
	Escherichia coli (1)
	HIV-1 M:B_HXB2R (1)

Taxonomy

	Eukaryota (32)
	other sequences (9)
	Riboviria (4)
	Bacteria (1)

Experimental Method

	X-RAY DIFFRACTION (32)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (33)

Refinement Resolution (Å)

	1.5 - 2.0 (12)
	2.0 - 2.5 (10)
	2.5 - 3.0 (6)
	3.0 - 3.5 (4)

Release Date

	2005 - 2009 (2)
	2010 - 2014 (6)
	2015 - 2019 (12)
	2020 - 2024 (13)

Enzyme Classification Name

	Transferases (22)
	Hydrolases (8)
	Ligases (1)

Symmetry Type

	Asymmetric (33)
	Cyclic (2)

SCOP Classification

	Alpha and beta proteins (a+b) (3)
	All beta proteins (2)

AllSelected

1 to 25 of 33 Structures

Page 1 of 2

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2VYT \| pdb_00002vyt	Download File View File

The MBT repeats of human SCML2 bind to peptides containing mono methylated lysine.

Santiveri, C.M., Lechtenberg, B.C., Allen, M.D., Sathyamurthy, A., Jaulent, A.M., Freund, S.M.V., Bycroft, M.

(2008) J Mol Biology 382: 1107

Released	2008-08-05
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	SEX COMB ON MIDLEG-LIKE PROTEIN 2 (protein)
Unique Ligands	MLZ, PGE

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2W0T \| pdb_00002w0t	Download File View File

Solution structure of the FCS zinc finger domain of human LMBL2

Lechtenberg, B.C., Allen, M.D., Bycroft, M.

(2009) Protein Sci 18: 657

Released	2009-01-20
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	LETHAL(3)MALIGNANT BRAIN TUMOR-LIKE 2 PROTEIN (protein)
Unique Ligands	ZN

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4BXS \| pdb_00004bxs	Download File View File

Crystal Structure of the Prothrombinase Complex from the Venom of Pseudonaja Textilis

Lechtenberg, B.C., Murray-Rust, T.A., Johnson, D.J.D., Adams, T.E., Krishnaswamy, S., Camire, R.M., Huntington, J.A.

(2013) Blood 122: 2777

Released	2013-07-31
Method	X-RAY DIFFRACTION 3.32 Å
Organisms	Pseudonaja textilis
Macromolecule	FACTOR X-LIKE PROTEASE (protein) VENOM PROTHROMBIN ACTIVATOR PSEUTARIN-C NON-CATALYTIC SUBUNIT (protein)
Unique Ligands	CA, CU, NAG
Unique branched monosaccharides	BMA, FUC, MAN, NAG

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4BXW \| pdb_00004bxw	Download File View File

Crystal Structure of the Prothrombinase Complex from the Venom of Pseudonaja Textilis

Lechtenberg, B.C., Murray-Rust, T.A., Johnson, D.J.D., Adams, T.E., Krishnaswamy, S., Camire, R.M., Huntington, J.A.

(2013) Blood 122: 2777

Released	2013-07-31
Method	X-RAY DIFFRACTION 2.71 Å
Organisms	Escherichia coli Pseudonaja textilis
Macromolecule	COAGULATION FACTOR V (protein) FACTOR XA (protein)
Unique Ligands	0GJ, GOL, NA

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4CH2 \| pdb_00004ch2	Download File View File

Low-salt crystal structure of a thrombin-GpIbalpha peptide complex

Lechtenberg, B.C., Freund, S.M.V., Huntington, J.A.

(2014) J Mol Biology 426: 881

Released	2013-12-11
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	PLATELET GLYCOPROTEIN IB ALPHA CHAIN, RESIDUES 287-300 (protein) THROMBIN, HEAVY CHAIN (protein) THROMBIN, LIGHT CHAIN (protein)
Unique Ligands	0G6, GOL, NA

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4CH8 \| pdb_00004ch8	Download File View File

High-salt crystal structure of a thrombin-GpIbalpha peptide complex

Lechtenberg, B.C., Freund, S.M.V., Huntington, J.A.

(2014) J Mol Biology 426: 881

Released	2013-12-11
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Homo sapiens
Macromolecule	PLATELET GLYCOPROTEIN IB ALPHA CHAIN, RESIDUES 287-300 (protein) THROMBIN, HEAVY CHAIN (protein) THROMBIN, LIGHT CHAIN (protein)
Unique Ligands	0G6, GOL, NA

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4W4Z \| pdb_00004w4z	Download File View File

Structure of the EphA4 LBD in complex with peptide

Lechtenberg, B.C., Mace, P.D., Riedl, S.J.

(2014) ACS Chem Biol 9: 2787-2795

Released	2014-10-08
Method	X-RAY DIFFRACTION 2.41 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	APY-bAla8.am peptide (protein) Ephrin type-A receptor 4 (protein)
Unique Ligands	GOL, HEZ

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4W50 \| pdb_00004w50	Download File View File

Structure of the EphA4 LBD in complex with peptide

Lechtenberg, B.C., Mace, P.D., Riedl, S.J.

(2014) ACS Chem Biol 9: 2787-2795

Released	2014-10-08
Method	X-RAY DIFFRACTION 2.42 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	APY peptide (protein) Ephrin type-A receptor 4 (protein)
Unique Ligands	BU2, GOL

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4WVP \| pdb_00004wvp	Download File View File

Crystal structure of an activity-based probe HNE complex

Lechtenberg, B.C., Kasperkiewicz, P., Robinson, H.R., Drag, M., Riedl, S.J.

(2015) ACS Chem Biol 10: 945-951

Released	2015-02-11
Method	X-RAY DIFFRACTION 1.63 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	BTN-3V3-NLB-OMT-OIC-3V2 (protein) Neutrophil elastase (protein)
Unique Ligands	EDO, SO4
Unique branched monosaccharides	BMA, FUC, NAG

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5EDV \| pdb_00005edv	Download File View File

Structure of the HOIP-RBR/UbcH5B~ubiquitin transfer complex

Lechtenberg, B.C., Mace, P.D., Sanishvili, R., Riedl, S.J.

(2016) Nature 529: 546-550

Released	2016-01-20
Method	X-RAY DIFFRACTION 3.48 Å
Organisms	Homo sapiens
Macromolecule	E3 ubiquitin-protein ligase RNF31 (protein) Polyubiquitin-B (protein) Ubiquitin-conjugating enzyme E2 D2 (protein)
Unique Ligands	ZN

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5JR2 \| pdb_00005jr2	Download File View File

Crystal structure of the EphA4 LBD in complex with APYd3 peptide inhibitor

Lechtenberg, B.C., Olson, E.J., Pasquale, E.B., Dawson, P.E., Riedl, S.J.

(2016) ACS Med Chem Lett 7: 841-846

Released	2016-07-06
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	APYd3 peptide (protein) Ephrin type-A receptor 4 (protein)
Unique Ligands	GOL, HEZ

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5V60 \| pdb_00005v60	Download File View File

Phospho-ERK2 bound to AMP-PCP

Lechtenberg, B.C., Riedl, S.J.

(2017) ACS Med Chem Lett 8: 726-731

Released	2017-07-26
Method	X-RAY DIFFRACTION 2.18 Å
Organisms	Homo sapiens
Macromolecule	Mitogen-activated protein kinase 1 (protein)
Unique Ligands	ACP, GOL, MG

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5V61 \| pdb_00005v61	Download File View File

Phospho-ERK2 bound to bivalent inhibitor SBP2

Lechtenberg, B.C., Riedl, S.J.

(2017) ACS Med Chem Lett 8: 726-731

Released	2017-07-26
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	HIV-1 M:B_HXB2R Homo sapiens
Macromolecule	Mitogen-activated protein kinase 1 (protein) Ribosomal protein S6 kinase alpha-1,Protein Tat (protein)
Unique Ligands	90A, FRZ, GOL

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5V62 \| pdb_00005v62	Download File View File

Phospho-ERK2 bound to bivalent inhibitor SBP3

Lechtenberg, B.C., Riedl, S.J.

(2017) ACS Med Chem Lett 8: 726-731

Released	2017-07-26
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Mitogen-activated protein kinase 1 (protein) Ribosomal protein S6 kinase alpha-1 (protein)
Unique Ligands	AKS, FRZ, GOL

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6NJZ \| pdb_00006njz	Download File View File

EphA2 LBD in complex with YSA-GSGSK-bio peptide

Lechtenberg, B.C., Pasquale, E.B.

(2019) J Biological Chem 294: 8791-8805

Released	2019-05-01
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Ephrin type-A receptor 2 (protein) YSA-GSGSK-bio peptide (protein)
Unique Ligands	BTN, GOL

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6NK0 \| pdb_00006nk0	Download File View File

EphA2 LBD in complex with bA-WLA-Yam peptide

Lechtenberg, B.C., Pasquale, E.B.

(2019) J Biological Chem 294: 8791-8805

Released	2019-05-01
Method	X-RAY DIFFRACTION 1.53 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Ephrin type-A receptor 2 (protein) bA-WLA-Yam (protein)
Unique Ligands	ACA, EDO, GOL, PEG

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6NK1 \| pdb_00006nk1	Download File View File

EphA2 LBD in complex with bA-WLA-YRPKbio peptide

Lechtenberg, B.C., Pasquale, E.B.

(2019) J Biological Chem 294: 8791-8805

Released	2019-05-01
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Ephrin type-A receptor 2 (protein) bA-WLA-YRPKbio (protein)
Unique Ligands	ACT, GOL

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6NK2 \| pdb_00006nk2	Download File View File

EphA2 LBD in complex with bA-WLA-YRPK bio peptide

Lechtenberg, B.C., Pasquale, E.B.

(2019) J Biological Chem 294: 8791-8805

Released	2019-05-01
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Ephrin type-A receptor 2 (protein) bA-WLA-YPRKbio peptide (protein)
Unique Ligands	PEG

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6NKP \| pdb_00006nkp	Download File View File

EphA2 LBD in complex with bA-WLA-YSKbio peptide

Lechtenberg, B.C., Pasquale, E.B.

(2019) J Biological Chem 294: 8791-8805

Released	2019-05-01
Method	X-RAY DIFFRACTION 2.033 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Ephrin type-A receptor 2 (protein) bA-WLA-YSKbio peptide (protein)
Unique Ligands	BTN

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6O5E \| pdb_00006o5e	Download File View File

Crystal structure of the Vitronectin hemopexin-like domain

Lechtenberg, B.C., Shin, K., Marassi, F.M.

(2019) Sci Adv 5: eaax5068-eaax5068

Released	2019-09-18
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Vitronectin (protein)
Unique Ligands	CL, IMD, NA, NO3, SO4

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6XA9 \| pdb_00006xa9	Download File View File

SARS CoV-2 PLpro in complex with ISG15 C-terminal domain propargylamide

Klemm, T., Calleja, D.J., Richardson, L.W., Lechtenberg, B.C., Komander, D.

(2020) EMBO J 39: e106275-e106275

Released	2020-06-17
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	ISG15 CTD-propargylamide (protein) Non-structural protein 3 (protein)
Unique Ligands	GOL, ZN

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6XAA \| pdb_00006xaa	Download File View File

SARS CoV-2 PLpro in complex with ubiquitin propargylamide

Klemm, T., Calleja, D.J., Richardson, L.W., Lechtenberg, B.C., Komander, D.

(2020) EMBO J 39: e106275-e106275

Released	2020-06-17
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	Non-structural protein 3 (protein) Ubiquitin-propargylamide (protein)
Unique Ligands	ZN