RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Structure Author = "Lee, H."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 203 Structures.

Refinements

Structure Determination Methodology

experimental (203)

Scientific Name of Source Organism

	Homo sapiens (51)
	Staphylococcus aureus (19)
	Mus musculus (13)
	synthetic construct (13)
	Canis lupus familiaris (6)
	Escherichia coli K-12 (6)
	Bos taurus (5)
	Drosophila melanogaster (5)
	Escherichia coli (5)
	Nostoc sp. PCC 7120 = FACHB-418 (5)

More...

Taxonomy

	Eukaryota (98)
	Bacteria (84)
	Monodnaviria (13)
	other sequences (13)
	Riboviria (10)
	Duplodnaviria (7)
	Archaea (6)
	Eukaryota (eukaryotes) (1)

Experimental Method

	X-RAY DIFFRACTION (103)
	SOLUTION NMR (74)
	ELECTRON MICROSCOPY (26)
	SOLUTION SCATTERING (2)

Polymer Entity Type

	Protein (202)
	DNA (3)
	RNA (3)

Refinement Resolution (Å)

	1.0 - 1.5 (5)
	1.5 - 2.0 (28)
	2.0 - 2.5 (30)
	2.5 - 3.0 (29)
	3.0 - 3.5 (22)
	3.5 - 4.0 (9)
	4.0 - 4.5 (2)
	> 4.5 (4)

Release Date

	1995 - 1999 (2)
	2000 - 2004 (8)
	2005 - 2009 (21)
	2010 - 2014 (71)
	2015 - 2019 (71)
	2020 - 2024 (23)
	2025 - 2029 (7)

Enzyme Classification Name

	Hydrolases (32)
	Transferases (21)
	Oxidoreductases (7)
	Lyases (5)
	Isomerases (4)
	Ligases (2)

Membrane Protein Annotation

	PDBTM (7)
	MemProtMD (6)
	OPM (4)

Symmetry Type

	Asymmetric (139)
	Cyclic (41)
	Icosahedral (16)
	Dihedral (8)
	Tetrahedral (1)

SCOP Classification

	All beta proteins (34)
	All alpha proteins (17)
	Alpha and beta proteins (a/b) (16)
	Artifacts (21)
	Alpha and beta proteins (a+b) (16)
	Designed proteins (1)
	Small proteins (1)

AllSelected

1 to 25 of 203 Structures

Page 1 of 9

Sort by

Explore in 3D

1J36 \| pdb_00001j36	Download File View File

Crystal Structure of Drosophila AnCE

Kim, H.M., Shin, D.R., Yoo, O.J., Lee, H., Lee, J.-O.

(2003) FEBS Lett 538: 65-70

Released	2003-07-20
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Drosophila melanogaster
Macromolecule	angiotensin converting enzyme (protein)
Unique Ligands	LPR, ZN

Explore in 3D

1J37 \| pdb_00001j37	Download File View File

Crystal Structure of Drosophila AnCE

Kim, H.M., Shin, D.R., Yoo, O.J., Lee, H., Lee, J.-O.

(2003) FEBS Lett 538: 65-70

Released	2003-07-20
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Drosophila melanogaster
Macromolecule	angiotensin converting enzyme (protein)
Unique Ligands	X8Z, ZN

Explore in 3D

1J38 \| pdb_00001j38	Download File View File

Crystal Structure of Drosophila AnCE

Kim, H.M., Shin, D.R., Lee, H., Lee, J.-O.

(2003) FEBS Lett 538: 65-70

Released	2003-07-20
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Drosophila melanogaster
Macromolecule	angiotensin converting enzyme (protein)
Unique Ligands	ZN

Explore in 3D

1JOL \| pdb_00001jol	Download File View File

THE CRYSTAL STRUCTURE OF THE BINARY COMPLEX BETWEEN FOLINIC ACID (LEUCOVORIN) AND E. COLI DIHYDROFOLATE REDUCTASE

Lee, H., Reyes, V.M., Kraut, J.

(1996) Biochemistry 35: 7012-7020

Released	1996-11-08
Method	X-RAY DIFFRACTION 1.96 Å
Organisms	Escherichia coli
Macromolecule	DIHYDROFOLATE REDUCTASE (protein)
Unique Ligands	CA, CL, FFO

Explore in 3D

1JOM \| pdb_00001jom	Download File View File

THE CRYSTAL STRUCTURE OF THE BINARY COMPLEX BETWEEN FOLINIC ACID (LEUCOVORIN) AND E. COLI DIHYDROFOLATE REDUCTASE

Reyes, V.M., Lee, H., Kraut, J.

(1996) Biochemistry 35: 7012-7020

Released	1996-11-08
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Escherichia coli
Macromolecule	DIHYDROFOLATE REDUCTASE (protein)
Unique Ligands	CA, CL, EOH, FFO

Explore in 3D

1MKD \| pdb_00001mkd	Download File View File

crystal structure of PDE4D catalytic domain and zardaverine complex

Lee, M.E., Markowitz, J., Lee, J.-O., Lee, H.

(2002) FEBS Lett 530: 53-58

Released	2003-03-01
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	Phosphodiesterase 4D (protein)
Unique Ligands	MG, ZAR, ZN

Explore in 3D

1NZ2 \| pdb_00001nz2	Download File View File

K45E Variant of Horse Heart Myoglobin

Hunter, C.L., Maurus, R., Mauk, M.R., Lee, H., Raven, E.L., Tong, H., Nguyen, N., Smith, M., Brayer, G.D., Mauk, A.G.

(2003) Proc Natl Acad Sci U S A 100: 3647-3652

Released	2003-04-08
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Equus caballus
Macromolecule	Myoglobin (protein)
Unique Ligands	HEM, SO4

Explore in 3D

1NZ3 \| pdb_00001nz3	Download File View File

K45E-K63E Variant of Horse Heart Myoglobin

Hunter, C.L., Maurus, R., Mauk, M.R., Lee, H., Raven, E.L., Tong, H., Nguyen, N., Smith, S., Brayer, G.D., Mauk, A.G.

(2003) Proc Natl Acad Sci U S A 100: 3647-3652

Released	2003-04-08
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Equus caballus
Macromolecule	Myoglobin (protein)
Unique Ligands	HEM

Explore in 3D

1NZ4 \| pdb_00001nz4	Download File View File

The horse heart myoglobin variant K45E/K63E complexed with Cadmium

Hunter, C.L., Maurus, R., Mauk, M.R., Lee, H., Raven, E.L., Tong, H., Nguyen, N., Smith, S., Brayer, G.D., Mauk, A.G.

(2003) Proc Natl Acad Sci U S A 100: 3647-3652

Released	2003-04-08
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Equus caballus
Macromolecule	Myoglobin (protein)
Unique Ligands	CD, HEM

Explore in 3D

1NZ5 \| pdb_00001nz5	Download File View File

The Horse heart myoglobin variant K45E/K63E complexed with Manganese

Hunter, C.L., Maurus, R., Mauk, M.R., Lee, H., Raven, E.L., Tong, H., Nguyen, N., Smith, S., Brayer, G.D., Mauk, A.G.

(2003) Proc Natl Acad Sci U S A 100: 3647-3652

Released	2003-04-08
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Equus caballus
Macromolecule	Myoglobin (protein)
Unique Ligands	HEM, MN

Explore in 3D

1WWL \| pdb_00001wwl	Download File View File

Crystal structure of CD14

Kim, J.-I., Lee, C.J., Jin, M.S., Lee, C.-H., Paik, S.-G., Lee, H., Lee, J.-O.

(2005) J Biological Chem 280: 11347-11351

Released	2005-02-22
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Mus musculus
Macromolecule	Monocyte differentiation antigen CD14 (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

Explore in 3D

1YMZ \| pdb_00001ymz	Download File View File

CC45, An Artificial WW Domain Designed Using Statistical Coupling Analysis

Socolich, M., Lockless, S.W., Russ, W.P., Lee, H., Gardner, K.H., Ranganathan, R.

(2005) Nature 437: 512-518

Released	2005-09-27
Method	SOLUTION NMR
Macromolecule	CC45 (protein)

Explore in 3D

2HEM \| pdb_00002hem	Download File View File

NMR structure and Mg2+ binding of an RNA segment that underlies the L7/L12 stalk in the E.coli 50S ribosomal subunit.

Zhao, Q., Nagaswamy, U., Lee, H., Xia, Y., Gao, X., Fox, G.

(2005) Nucleic Acids Res 33: 3145-3153

Released	2006-09-12
Method	SOLUTION NMR
Organisms	synthetic construct
Macromolecule	5'-R(PGPGPGPAPAPGPGPCPGPCPUPUPCPGPGPCPGPUPCPGPGPCPCPC)-3' (nucleic acid)

Explore in 3D

2HNU \| pdb_00002hnu	Download File View File

Crystal Structure of a Dipeptide Complex of Bovine Neurophysin-I

Li, X., Lee, H., Wu, J., Breslow, E.

(2007) Protein Sci 16: 52-68

Released	2007-04-24
Method	X-RAY DIFFRACTION 2 Å
Organisms	Bos taurus
Macromolecule	Oxytocin-neurophysin 1 (protein)
Unique Ligands	PHE, TYR

Explore in 3D

2HNV \| pdb_00002hnv	Download File View File

Crystal Structure of a Dipeptide Complex of the Q58V Mutant of Bovine Neurophysin-I

Li, X., Lee, H., Wu, J., Breslow, E.

(2007) Protein Sci 16: 52-68

Released	2007-04-24
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Bos taurus
Macromolecule	Oxytocin-neurophysin 1 (protein)
Unique Ligands	PHE, TYR

Explore in 3D

2HNW \| pdb_00002hnw	Download File View File

Crystal Structure of the F91STOP mutant of des1-6 Bovine Neurophysin-I, unliganded state

Li, X., Lee, H., Wu, J., Breslow, E.

(2007) Protein Sci 16: 52-68

Released	2007-04-24
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Bos taurus
Macromolecule	Oxytocin-neurophysin 1 (protein)

Explore in 3D

2JQJ \| pdb_00002jqj	Download File View File

NMR structure of yeast Dun1 FHA domain

Yuan, C., Lee, H., Chang, C., Heierhorst, J., Tsai, M.

(2008) Mol Cell 30: 767-778

Released	2008-06-24
Method	SOLUTION NMR
Organisms	Saccharomyces cerevisiae
Macromolecule	DNA damage response protein kinase DUN1 (protein)

Explore in 3D

2JQL \| pdb_00002jql	Download File View File

NMR structure of the yeast Dun1 FHA domain in complex with a doubly phosphorylated (pT) peptide derived from Rad53 SCD1

Yuan, C., Lee, H., Chang, C., Heierhorst, J., Tsai, M.

(2008) Mol Cell 30: 767-778

Released	2008-06-24
Method	SOLUTION NMR
Organisms	Saccharomyces cerevisiae Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Macromolecule	DNA damage response protein kinase DUN1 (protein) Serine/threonine-protein kinase RAD53 (protein)

Explore in 3D

2K1H \| pdb_00002k1h	Download File View File

Solution NMR structure of SeR13 from Staphylococcus epidermidis. Northeast Structural Genomics Consortium target SeR13

Lee, H., Wylie, G., Bansal, S., Wang, X., Shastry, R., Jiang, M., Cunningham, K., Ma, L., Xiao, R., Liu, J., Baran, M.C., Swapna, G., Acton, T.B., Rost, B., Montelione, G.T., Prestegard, J.H., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2008-03-18
Method	SOLUTION NMR
Organisms	Staphylococcus epidermidis ATCC 12228
Macromolecule	Uncharacterized protein SeR13 (protein)

Explore in 3D

2K5K \| pdb_00002k5k	Download File View File

Solution structure of RhR2 from Rhodobacter Sphaeroides. Northeast Structural Genomics Consortium

Lee, H., Bansal, S., Chen, C.X., Jiang, M., Maglaqui, M., Xiao, R., Liu, J., Baran, M.C., Swapna, G., Acton, T.B., Rost, B., Montelione, G.T., Prestegard, J.H., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2008-08-26
Method	SOLUTION NMR
Organisms	Cereibacter sphaeroides 2.4.1
Macromolecule	uncharacterized protein RhR2 (protein)

Explore in 3D

2KC7 \| pdb_00002kc7	Download File View File

Solution NMR structure of Bacteroides fragilis protein BF1650. Northeast Structural Genomics Consortium target BfR218

Eletsky, A., Wu, Y., Sukumaran, D., Lee, H., Lee, D.Y., Jiang, M., Foote, E.L., Xiao, R., Nair, R., Everett, J.K., Swapna, G.V.T., Acton, T.B., Rost, B., Montelione, G.T., Prestegard, J.H., Szyperski, T., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2009-01-13
Method	SOLUTION NMR
Organisms	Bacteroides fragilis
Macromolecule	bfr218_protein (protein)

Explore in 3D

2KCT \| pdb_00002kct	Download File View File

Solution nmr structure of the ob-fold domain of heme chaperone ccme from desulfovibrio vulgaris. northeast structural genomics target dvr115g.

Aramini, J.M., Rossi, P., Lee, H., Lemak, A., Wang, H., Foote, E.L., Jiang, M., Xiao, R., Nair, R., Swapna, G.V.T., Acton, T.B., Rost, B., Everett, J.K., Montelione, G.T., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2009-02-10
Method	SOLUTION NMR
Organisms	Nitratidesulfovibrio vulgaris str. Hildenborough
Macromolecule	Cytochrome c-type biogenesis protein CcmE (protein)