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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Marks, D."

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Search Summary

This query matches 108 Structures.

Refinements

Structure Determination Methodology

experimental (108)

Scientific Name of Source Organism

	Achromobacter xylosoxidans (107)
	Achromobacter xylosoxidans NBRC 15126 = ATCC 27061 (1)

Taxonomy

Bacteria (108)

Experimental Method

	X-RAY DIFFRACTION (103)
	ELECTRON MICROSCOPY (4)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (108)

Refinement Resolution (Å)

	0.5 - 1.0 (6)
	1.0 - 1.5 (43)
	1.5 - 2.0 (37)
	2.0 - 2.5 (13)
	2.5 - 3.0 (2)
	3.0 - 3.5 (4)
	3.5 - 4.0 (1)
	> 4.5 (1)

Release Date

	1985 - 1989 (1)
	1990 - 1994 (2)
	1995 - 1999 (6)
	2000 - 2004 (16)
	2005 - 2009 (19)
	2010 - 2014 (37)
	2015 - 2019 (22)
	2020 - 2024 (5)

Enzyme Classification Name

	Oxidoreductases (46)
	Lyases (1)

Symmetry Type

	Cyclic (93)
	Asymmetric (15)
	Dihedral (1)

SCOP Classification

	All beta proteins (49)
	All alpha proteins (51)
	Artifacts (3)
	Alpha and beta proteins (a+b) (1)
	Alpha and beta proteins (a/b) (1)

AllSelected

1 to 25 of 108 Structures

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1AZB: Entity 1	Download File View File

STRUCTURE OF APO-AZURIN FROM ALCALIGENES DENITRIFICANS AT 1.8 ANGSTROMS RESOLUTION

Baker, E.N., Shepard, W.E.B.

(1993) Acta Crystallogr D Biol Crystallogr 49: 331-343

Released	1993-10-31
Method	X-RAY DIFFRACTION 2.2 Å
Chain IDs	A, B
Organism	Achromobacter xylosoxidans
Macromolecule	AZURIN

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1AZC: Entity 1	Download File View File

STRUCTURE OF APO-AZURIN FROM ALCALIGENES DENITRIFICANS AT 1.8 ANGSTROMS RESOLUTION

Baker, E.N., Shepard, W.E.B., Kingston, R.L.

(1993) Acta Crystallogr D Biol Crystallogr 49: 331-343

Released	1993-10-31
Method	X-RAY DIFFRACTION 1.8 Å
Chain IDs	A, B
Organism	Achromobacter xylosoxidans
Macromolecule	AZURIN

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1BQ5: Entity 1	Download File View File

NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS GIFU 1051

Inoue, T., Gotowda, M., Deligeer, Suzuki, S., Kataoka, K., Yamaguchi, K., Watanabe, H., Goho, M., Yasushi, K.A.I.

(1998) J Biochem 124: 876-879

Released	1999-08-21
Method	X-RAY DIFFRACTION 2.05 Å
Chain ID	A
Organism	Achromobacter xylosoxidans
Macromolecule	NITRITE REDUCTASE

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1CGN: Entity 1	Download File View File

CYTOCHROME C'

Dobbs, A.J., Faber, H.R., Anderson, B.F., Baker, E.N.

(1996) Acta Crystallogr D Biol Crystallogr 52: 356-368

Released	1995-07-31
Method	X-RAY DIFFRACTION 2.15 Å
Chain ID	A
Organism	Achromobacter xylosoxidans
Macromolecule	CYTOCHROME C

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1DYZ: Entity 1	Download File View File

OXIDISED AZURIN II FROM ALCALIGENES XYLOSOXIDANS

Dodd, F.E., Abraham, Z.H.L., Eady, R.R., Hasnain, S.S.

(2000) Acta Crystallogr D Biol Crystallogr 56: 690

Released	2000-07-10
Method	X-RAY DIFFRACTION 1.75 Å
Chain ID	A
Organism	Achromobacter xylosoxidans
Macromolecule	AZURIN II

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1DZ0: Entity 1	Download File View File

REDUCED AZURIN II FROM ALCALIGENES XYLOSOXIDANS

Dodd, F.E., Abraham, Z.H.L., Eady, R.R., Hasnain, S.S.

(2000) Acta Crystallogr D Biol Crystallogr 56: 690

Released	2000-07-04
Method	X-RAY DIFFRACTION 1.75 Å
Chain ID	A
Organism	Achromobacter xylosoxidans
Macromolecule	AZURIN II

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1E83: Entity 1	Download File View File

Cytochrome c' from Alcaligenes xylosoxidans - oxidized structure

Lawson, D.M., Stevenson, C.E.M., Andrew, C.R., Eady, R.R.

(2000) EMBO J 19: 5661

Released	2000-11-06
Method	X-RAY DIFFRACTION 2.05 Å
Chain ID	A
Organism	Achromobacter xylosoxidans
Macromolecule	CYTOCHROME C'

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1E84: Entity 1	Download File View File

Cytochrome c' from Alcaligenes xylosoxidans - reduced structure

Lawson, D.M., Stevenson, C.E.M., Andrew, C.R., Eady, R.R.

(2000) EMBO J 19: 5661

Released	2000-11-06
Method	X-RAY DIFFRACTION 1.9 Å
Chain ID	A
Organism	Achromobacter xylosoxidans
Macromolecule	CYTOCHROME C'

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1E85: Entity 1	Download File View File

Cytochrome c' from Alcaligenes xylosoxidans - reduced structure with NO bound to proximal side of heme

Lawson, D.M., Stevenson, C.E.M., Andrew, C.R., Eady, R.R.

(2000) EMBO J 19: 5661

Released	2000-11-06
Method	X-RAY DIFFRACTION 1.35 Å
Chain ID	A
Organism	Achromobacter xylosoxidans
Macromolecule	CYTOCHROME C'

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1E86: Entity 1	Download File View File

Cytochrome c' from Alcaligenes xylosoxidans - reduced structure with CO bound to distal side of heme

Lawson, D.M., Stevenson, C.E.M., Andrew, C.R., Eady, R.R.

(2000) EMBO J 19: 5661

Released	2000-11-06
Method	X-RAY DIFFRACTION 1.95 Å
Chain ID	A
Organism	Achromobacter xylosoxidans
Macromolecule	CYTOCHROME C'

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1GS6: Entity 1	Download File View File

Crystal structure of M144A mutant of Alcaligenes xylosoxidans Nitrite Reductase

Ellis, M.J., Prudencio, M., Dodd, F.E., Strange, R.W., Sawers, G., Eady, R.R., Hasnain, S.S.

(2002) J Mol Biology 316: 51

Released	2002-02-14
Method	X-RAY DIFFRACTION 2.2 Å
Chain ID	A [auth X]
Organism	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE

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1GS7: Entity 1	Download File View File

Crystal structure of H254F mutant of Alcaligenes xylosoxidans Nitrite Reductase

Ellis, M.J., Prudencio, M., Dodd, F.E., Strange, R.W., Sawers, G., Eady, R.R., Hasnain, S.S.

(2002) J Mol Biology 316: 51

Released	2002-02-14
Method	X-RAY DIFFRACTION 1.85 Å
Chain ID	A
Organism	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE

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1GS8: Entity 1	Download File View File

Crystal structure of mutant D92N Alcaligenes xylosoxidans Nitrite Reductase

Ellis, M.J., Prudencio, M., Dodd, F.E., Strange, R.W., Sawers, G., Eady, R.R., Hasnain, S.S.

(2002) J Mol Biology 316: 51

Released	2002-02-14
Method	X-RAY DIFFRACTION 1.9 Å
Chain ID	A
Organism	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE

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1HAU: Entity 1	Download File View File

X-RAY STRUCTURE OF A BLUE COPPER NITRITE REDUCTASE AT HIGH PH AND IN COPPER FREE FORM AT 1.9 A RESOLUTION

Ellis, M.J., Dodd, F.E., Strange, R.W., Prudencio, M., Sawerseady, R.R., Hasnain, S.S.

(2001) Acta Crystallogr D Biol Crystallogr 57: 1110

Released	2001-08-02
Method	X-RAY DIFFRACTION 1.9 Å
Chain ID	A
Organism	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE

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1HAW: Entity 1	Download File View File

X-RAY STRUCTURE OF A BLUE COPPER NITRITE REDUCTASE AT HIGH PH AND IN COPPER FREE FORM AT 1.9 A RESOLUTION

Ellis, M.J., Dodd, F.E., Strange, R.W., Prudencio, M., Sawerseady, R.R., Hasnain, S.S.

(2001) Acta Crystallogr D Biol Crystallogr 57: 1110

Released	2001-08-02
Method	X-RAY DIFFRACTION 1.9 Å
Chain ID	A
Organism	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE

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1NDR: Entity 1	Download File View File

CRYSTALLOGRAPHIC STRUCTURE OF A BLUE COPPER NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS

Dodd, F.E., Hasnain, S.S., Abraham, Z.H.L., Eady, R.R., Smith, B.E.

(1997) Acta Crystallogr D Biol Crystallogr 53: 406-418

Released	1997-07-07
Method	X-RAY DIFFRACTION 3 Å
Chain IDs	A, B, C
Organism	Achromobacter xylosoxidans
Macromolecule	NITRITE REDUCTASE

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1NDS: Entity 1	Download File View File

CRYSTALLOGRAPHIC STRUCTURE OF A SUBSTRATE BOUND BLUE COPPER NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS

Dodd, F.E., Hasnain, S.S., Abraham, Z.H.L., Eady, R.R., Smith, B.E.

(1997) Acta Crystallogr D Biol Crystallogr 53: 406-418

Released	1997-07-07
Method	X-RAY DIFFRACTION 2.8 Å
Chain IDs	A, B, C
Organism	Achromobacter xylosoxidans
Macromolecule	NITRITE REDUCTASE

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1NDT: Entity 1	Download File View File

NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS

Dodd, F.E., Vanbeeumen, J., Eady, R.R., Hasnain, S.S.

(1998) J Mol Biology 282: 369-382

Released	1998-11-04
Method	X-RAY DIFFRACTION 2.1 Å
Chain ID	A
Organism	Achromobacter xylosoxidans
Macromolecule	PROTEIN (NITRITE REDUCTASE)

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1OBF: Entity 1	Download File View File

The crystal structure of Glyceraldehyde 3-phosphate Dehydrogenase from Alcaligenes xylosoxidans at 1.7A resolution.

Antonyuk, S.V., Eady, R.R., Strange, R.W., Hasnain, S.S.

(2003) Acta Crystallogr D Biol Crystallogr 59: 835

Released	2003-06-12
Method	X-RAY DIFFRACTION 1.7 Å
Chain IDs	A [auth O], B [auth P]
Organism	Achromobacter xylosoxidans
Macromolecule	GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE

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1OE1: Entity 1	Download File View File

Atomic Resolution Structure of the Wildtype Native Nitrite Reductase from Alcaligenes xylosoxidans

Ellis, M.J., Dodd, F.E., Hasnain, S.S.

(2003) J Mol Biology 328: 429

Released	2003-04-17
Method	X-RAY DIFFRACTION 1.04 Å
Chain ID	A
Organism	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE

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1OE2: Entity 1	Download File View File

Atomic Resolution Structure of D92E Mutant of Alcaligenes xylosoxidans Nitrite Reductase

Ellis, M.J., Dodd, F.E., Sawers, G., Eady, R.R., Hasnain, S.S.

(2003) J Mol Biology 328: 429

Released	2003-04-17
Method	X-RAY DIFFRACTION 1.12 Å
Chain ID	A
Organism	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE

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1OE3: Entity 1	Download File View File

Atomic resolution structure of 'Half Apo' NiR

Ellis, M.J., Dodd, F.E., Sawers, G., Eady, R.R., Hasnain, S.S.

(2003) J Mol Biology 328: 429

Released	2004-07-21
Method	X-RAY DIFFRACTION 1.15 Å
Chain ID	A
Organism	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE

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1RKR: Entity 1	Download File View File

CRYSTAL STRUCTURE OF AZURIN-I FROM ALCALIGENES XYLOSOXIDANS NCIMB 11015

Li, C., Inoue, T., Gotowda, M., Suzuki, S., Yamaguchi, K., Kataoka, K., Kai, Y.

(1998) Acta Crystallogr D Biol Crystallogr 54: 347-354

Released	1998-05-20
Method	X-RAY DIFFRACTION 2.45 Å
Chain IDs	A, B, C, D
Organism	Achromobacter xylosoxidans
Macromolecule	AZURIN-I

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1WA0: Entity 1	Download File View File

Crystal Structure Of W138H Mutant Of Alcaligenes Xylosoxidans Nitrite Reductase

Barrett, M.L., Harris, R.L., Antonyuk, S.V., Strange, R.W., Hough, M.A., Eady, R.R., Sawers, G., Hasnain, S.S.

(2004) Biochemistry 43: 16311

Released	2005-01-04
Method	X-RAY DIFFRACTION 1.6 Å
Chain ID	A [auth X]
Organism	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE

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1WA1: Entity 1	Download File View File

Crystal Structure Of H313Q Mutant Of Alcaligenes Xylosoxidans Nitrite Reductase

Barrett, M.L., Harris, R.L., Antonyuk, S.V., Strange, R.W., Hough, M.A., Eady, R.R., Sawers, G., Hasnain, S.S.

(2004) Biochemistry 43: 16311

Released	2005-01-04
Method	X-RAY DIFFRACTION 1.65 Å
Chain ID	A [auth X]
Organism	Achromobacter xylosoxidans
Macromolecule	DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE