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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Park, E."

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Search Summary

This query matches 87 Structures.

Refinements

Structure Determination Methodology

experimental (87)

Scientific Name of Source Organism

	Homo sapiens (51)
	Saccharomyces cerevisiae S288C (11)
	Saccharomyces cerevisiae BY4741 (10)
	Spodoptera exigua (5)
	Mus musculus (4)
	Thermomyces lanuginosus (4)
	synthetic construct (3)
	Bacillus subtilis (2)
	Bos taurus (2)
	Escherichia coli (2)

More...

Taxonomy

	Eukaryota (81)
	Bacteria (7)
	other sequences (3)
	Archaea (1)

Experimental Method

	ELECTRON MICROSCOPY (58)
	X-RAY DIFFRACTION (29)

Polymer Entity Type

	Protein (87)
	RNA (5)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (1)
	2.0 - 2.5 (7)
	2.5 - 3.0 (20)
	3.0 - 3.5 (28)
	3.5 - 4.0 (14)
	4.0 - 4.5 (10)
	> 4.5 (6)

Release Date

	2010 - 2014 (4)
	2015 - 2019 (25)
	2020 - 2024 (58)

Enzyme Classification Name

	Transferases (30)
	Translocases (14)
	Hydrolases (7)

Membrane Protein Annotation

	PDBTM (43)
	OPM (42)
	MemProtMD (39)
	mpstruc (39)

Symmetry Type

	Asymmetric (77)
	Cyclic (9)
	Dihedral (1)

SCOP Classification

Alpha and beta proteins (a+b) (18)

AllSelected

1 to 25 of 87 Structures

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3J45 \| pdb_00003j45	Download File View File

Structure of a non-translocating SecY protein channel with the 70S ribosome

Menetret, J.F., Park, E., Gumbart, J.C., Ludtke, S.J., Li, W., Whynot, A., Rapoport, T.A., Akey, C.W.

(2013) Nature 506: 102-106

Released	2013-10-23
Method	ELECTRON MICROSCOPY 9.5 Å
Organisms	Escherichia coli
Macromolecule	Unique protein chains: 6 Unique nucleic acid chains: 5

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3J46 \| pdb_00003j46	Download File View File

Structure of the SecY protein translocation channel in action

Akey, C.W., Park, E., Menetret, J.F., Gumbart, J.C., Ludtke, S.J., Li, W., Whynot, A., Rapoport, T.A.

(2013) Nature 506: 102-106

Released	2013-10-23
Method	ELECTRON MICROSCOPY 10.1 Å
Organisms	Escherichia coli
Macromolecule	Unique protein chains: 8 Unique nucleic acid chains: 6

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4G4E \| pdb_00004g4e	Download File View File

Crystal structure of the L88A mutant of HslV from Escherichia coli

Lee, J.W., Park, E., Yoo, H.M., Ha, B.H., An, J.Y., Jeon, Y.J., Seol, J.H., Eom, S.H., Chung, C.H.

(2013) J Mol Biology 425: 2940-2954

Released	2013-06-12
Method	X-RAY DIFFRACTION 2.888 Å
Organisms	Escherichia coli K-12
Macromolecule	ATP-dependent protease subunit HslV (protein)

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4R3P \| pdb_00004r3p	Download File View File

Crystal structures of EGFR in complex with Mig6

Park, E., Kim, N., Yi, Z., Cho, A., Kim, K., Ficarro, S.B., Park, A., Park, W.Y., Murray, B., Meyerson, M., Beroukim, R., Marto, J.A., Cho, J., Eck, M.J.

(2015) Nat Struct Mol Biol 22: 703-711

Released	2015-08-12
Method	X-RAY DIFFRACTION 2.905 Å
Organisms	Homo sapiens
Macromolecule	Epidermal growth factor receptor (protein) peptide from ERBB receptor feedback inhibitor 1 (protein)

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4R3R \| pdb_00004r3r	Download File View File

Crystal structures of EGFR in complex with Mig6

Park, E., Kim, N., Yi, Z., Cho, A., Kim, K., Ficarro, S.B., Park, A., Park, W.Y., Murray, B., Meyerson, M., Beroukim, R., Marto, J.A., Cho, J., Eck, M.J.

(2015) Nat Struct Mol Biol 22: 703-711

Released	2015-08-12
Method	X-RAY DIFFRACTION 3.25 Å
Organisms	Homo sapiens
Macromolecule	Epidermal growth factor receptor (protein) peptide from ERBB receptor feedback inhibitor 1' (protein)

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4V4N \| pdb_00004v4n	Download File View File

Structure of the Methanococcus jannaschii ribosome-SecYEBeta channel complex

Menetret, J.F., Park, E., Gumbart, J.C., Ludtke, S.J., Li, W., Whynot, A., Rapoport, T.A., Akey, C.W.

(2013) Nature 506: 102-106

Released	2014-07-09
Method	ELECTRON MICROSCOPY 9 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	Unique protein chains: 63 Unique nucleic acid chains: 4

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4WYB \| pdb_00004wyb	Download File View File

Structure of the Bud6 flank domain in complex with actin

Eck, M.J., Park, E., Zheng, W.

(2015) Structure 23: 1492-1499

Released	2015-08-19
Method	X-RAY DIFFRACTION 3.493 Å
Organisms	Oryctolagus cuniculus Saccharomyces cerevisiae S288C
Macromolecule	Actin, alpha skeletal muscle (protein) Bud site selection protein 6 (protein)
Unique Ligands	ATP, CA

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4ZJV \| pdb_00004zjv	Download File View File

crystal structure of EGFR kinase domain in complex with Mitogen-inducible gene 6 protein

Eck, M.J., Park, E., Lee, B.

(2015) Nat Struct Mol Biol 22: 703-711

Released	2015-08-12
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens
Macromolecule	ERBB receptor feedback inhibitor 1 (protein) Epidermal growth factor receptor (protein)

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5D41 \| pdb_00005d41	Download File View File

EGFR kinase domain in complex with mutant selective allosteric inhibitor

Yun, C.-H., Park, E., Eck, M.J.

(2016) Nature 534: 129-132

Released	2016-06-08
Method	X-RAY DIFFRACTION 2.31 Å
Organisms	Homo sapiens
Macromolecule	Epidermal growth factor receptor (protein)
Unique Ligands	57N, ANP, MG

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5EUL \| pdb_00005eul	Download File View File

Structure of the SecA-SecY complex with a translocating polypeptide substrate

Li, L., Park, E., Ling, J., Ingram, J., Ploegh, H., Rapoport, T.A.

(2016) Nature 531: 395-399

Released	2016-03-09
Method	X-RAY DIFFRACTION 3.7 Å
Organisms	Bacillus subtilis subsp. subtilis str. 168 Geobacillus thermodenitrificans NG80-2 Vicugna pacos synthetic construct
Macromolecule	AYC08 (protein) Preprotein translocase SecE subunit (protein) Protein translocase subunit SecA, Insertion Peptide Chimera (protein) Protein translocase subunit SecY (protein)
Unique Ligands	ADP, BEF, MG, TBR

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5TQQ \| pdb_00005tqq	Download File View File

Cryo-electron microscopy structure of a bovine CLC-K chloride channel, main (class 1) conformation

Park, E., MacKinnon, R.

(2017) Nature 541: 500-505

Released	2017-01-04
Method	ELECTRON MICROSCOPY 3.76 Å
Organisms	Bos taurus Mus musculus
Macromolecule	Chloride channel protein (protein) Monoclonal antibody, Fab fragment, heavy chain (protein) Monoclonal antibody, Fab fragment, light chain (protein)

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5TR1 \| pdb_00005tr1	Download File View File

Cryo-electron microscopy structure of a bovine CLC-K chloride channel, alternate (class 2) conformation

Park, E., MacKinnon, R.

(2017) Nature 541: 500-505

Released	2017-01-11
Method	ELECTRON MICROSCOPY 3.95 Å
Organisms	Bos taurus Mus musculus
Macromolecule	Chloride channel protein (protein) Monoclonal antibody, Fab fragment, heavy chain (protein) Monoclonal antibody, Fab fragment, light chain (protein)
Unique Ligands	Y01

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5WIJ \| pdb_00005wij	Download File View File

JAK2 Pseudokinase in complex with NU6140

Li, Q., Eck, M.J., Li, K., Park, E.

(2019) ACS Chem Biol 14: 587-593

Released	2018-08-01
Method	X-RAY DIFFRACTION 2.04 Å
Organisms	Homo sapiens
Macromolecule	Tyrosine-protein kinase JAK2 (protein)
Unique Ligands	AQG

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5WIK \| pdb_00005wik	Download File View File

JAK2 Pseudokinase in complex with BI-D1870

Li, Q., Eck, M.J., Li, K., Park, E.

(2019) ACS Chem Biol 14: 587-593

Released	2018-08-01
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	Tyrosine-protein kinase JAK2 (protein)
Unique Ligands	584

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5WIL \| pdb_00005wil	Download File View File

JAK2 Pseudokinase in complex with AZD7762

Li, Q., Eck, M.J., Li, K., Park, E.

(2019) ACS Chem Biol 14: 587-593

Released	2018-08-01
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	Tyrosine-protein kinase JAK2 (protein)
Unique Ligands	YDJ

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5WIM \| pdb_00005wim	Download File View File

JAK2 Pseudokinase in complex with AT9283

Li, Q., Eck, M.J., Li, K., Park, E.

(2019) ACS Chem Biol 14: 587-593

Released	2018-08-01
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Homo sapiens
Macromolecule	Tyrosine-protein kinase JAK2 (protein)
Unique Ligands	35R

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5WIN \| pdb_00005win	Download File View File

JAK2 Pseudokinase in complex with JNJ7706621

Li, Q., Eck, M.J., Li, K., Park, E.

(2019) ACS Chem Biol 14: 587-593

Released	2018-08-01
Method	X-RAY DIFFRACTION 2.38 Å
Organisms	Homo sapiens
Macromolecule	Tyrosine-protein kinase JAK2 (protein)
Unique Ligands	SKE

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6COY \| pdb_00006coy	Download File View File

Human CLC-1 chloride ion channel, transmembrane domain

Park, E., MacKinnon, R.

(2018) Elife 7:

Released	2018-06-13
Method	ELECTRON MICROSCOPY 3.36 Å
Organisms	Homo sapiens
Macromolecule	Chloride channel protein 1 (protein)
Unique Ligands	CL

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6COZ \| pdb_00006coz	Download File View File

Human CLC-1 chloride ion channel, C-terminal cytosolic domain

Park, E., MacKinnon, R.

(2018) Elife 7:

Released	2018-06-13
Method	ELECTRON MICROSCOPY 3.36 Å
Organisms	Homo sapiens
Macromolecule	Chloride channel protein 1 (protein)

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6D8E \| pdb_00006d8e	Download File View File

Discovery of a Highly Potent and Broadly Effective EGFR and HER2 Exon 20 Insertion Mutant Inhibitor

Park, E., Eck, M.J.

(2018) Angew Chem Int Ed Engl 57: 11629-11633

Released	2018-07-18
Method	X-RAY DIFFRACTION 2.537 Å
Organisms	Homo sapiens
Macromolecule	Epidermal growth factor receptor (protein)
Unique Ligands	FZP

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6DUK \| pdb_00006duk	Download File View File

EGFR with an allosteric inhibitor

Park, E., Eck, M.J.

(2019) Cancer Discov 9: 926-943

Released	2019-06-05
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	Epidermal growth factor receptor (protein)
Unique Ligands	ANP, JBJ, MG

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6N3Q \| pdb_00006n3q	Download File View File

Cryo-EM structure of the yeast Sec complex

Park, E., Itskanov, S.

(2019) Science 363: 84-87

Released	2018-12-19
Method	ELECTRON MICROSCOPY 3.68 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Unique protein chains: 6

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6NYB \| pdb_00006nyb	Download File View File

Structure of a MAPK pathway complex

Park, E., Rawson, S., Li, K., Jeon, H., Eck, M.J.

(2019) Nature 575: 545-550

Released	2019-10-09
Method	ELECTRON MICROSCOPY 4.1 Å
Organisms	Homo sapiens Spodoptera exigua
Macromolecule	14-3-3 protein zeta (protein) Dual specificity mitogen-activated protein kinase kinase 1 (protein) Serine/threonine-protein kinase B-raf (protein)
Unique Ligands	ADP, AGS, LCJ, MG, ZN

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6PP9 \| pdb_00006pp9	Download File View File

Crystal structure of BRAF:MEK1 complex

Li, K., Gonzalez Del-Pino, G., Park, E., Eck, M.J.

(2019) Nature 575: 545-550

Released	2019-10-09
Method	X-RAY DIFFRACTION 2.59 Å
Organisms	Homo sapiens
Macromolecule	Dual specificity mitogen-activated protein kinase kinase 1 (protein) Serine/threonine-protein kinase B-raf (protein)
Unique Ligands	ANP, CL, GOL, LCJ, MG, SO4

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6Q0J \| pdb_00006q0j	Download File View File

Structure of a MAPK pathway complex

Park, E., Rawson, S., Jeon, H., Eck, M.J.

(2019) Nature 575: 545-550

Released	2019-10-09
Method	ELECTRON MICROSCOPY 4.9 Å
Organisms	Homo sapiens Spodoptera exigua
Macromolecule	14-3-3 protein zeta (protein) Dual specificity mitogen-activated protein kinase kinase 1 (protein) Serine/threonine-protein kinase B-raf (protein)
Unique Ligands	AGS, LCJ, MG

1 to 25 of 87 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

3J45 | pdb_00003j45

3J46 | pdb_00003j46

4G4E | pdb_00004g4e

4R3P | pdb_00004r3p

4R3R | pdb_00004r3r

4V4N | pdb_00004v4n

4WYB | pdb_00004wyb

4ZJV | pdb_00004zjv

5D41 | pdb_00005d41

5EUL | pdb_00005eul

5TQQ | pdb_00005tqq

5TR1 | pdb_00005tr1

5WIJ | pdb_00005wij

5WIK | pdb_00005wik

5WIL | pdb_00005wil

5WIM | pdb_00005wim

5WIN | pdb_00005win

6COY | pdb_00006coy

6COZ | pdb_00006coz

6D8E | pdb_00006d8e

6DUK | pdb_00006duk

6N3Q | pdb_00006n3q

6NYB | pdb_00006nyb

6PP9 | pdb_00006pp9

6Q0J | pdb_00006q0j