RCSB PDB: Search

2N6F \| pdb_00002n6f	Download File View File

Structure of Pleiotrophin

Ryan, E.O., Shen, D., Wang, X.

(2016) FEBS J 283: 1488-1503

Released	2016-04-20
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Pleiotrophin (protein)

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2VSN \| pdb_00002vsn	Download File View File

Structure and topological arrangement of an O-GlcNAc transferase homolog: insight into molecular control of intracellular glycosylation

Martinez-Fleites, C., Macauley, M.S., He, Y., Shen, D., Vocadlo, D., Davies, G.J.

(2008) Nat Struct Mol Biol 15: 764

Released	2008-06-10
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Xanthomonas campestris pv. campestris str. 8004
Macromolecule	XCOGT (protein)
Unique Ligands	UDP

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4CPE \| pdb_00004cpe	Download File View File

Wild-type streptavidin in complex with love-hate ligand 1 (LH1)

Fairhead, M., Shen, D., Chan, L.K.M., Lowe, E.D., Donohoe, T.J., Howarth, M.

(2014) Bioorg Med Chem 22: 5476

Released	2014-08-06
Method	X-RAY DIFFRACTION 1.06 Å
Organisms	Streptomyces avidinii
Macromolecule	STREPTAVIDIN (protein)
Unique Ligands	LUV

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4CPF \| pdb_00004cpf	Download File View File

Wild-type streptavidin in complex with love-hate ligand 3 (LH3)

Fairhead, M., Shen, D., Chan, L.K.M., Lowe, E.D., Donohoe, T.J., Howarth, M.

(2014) Bioorg Med Chem 22: 5476

Released	2014-08-06
Method	X-RAY DIFFRACTION 1.14 Å
Organisms	Streptomyces avidinii
Macromolecule	STREPTAVIDIN (protein)
Unique Ligands	LH3

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4CPH \| pdb_00004cph	Download File View File

trans-divalent streptavidin with love-hate ligand 4

Fairhead, M., Shen, D., Chan, L.K.M., Lowe, E.D., Donohoe, T.J., Howarth, M.

(2014) Bioorg Med Chem 22: 5476

Released	2014-08-06
Method	X-RAY DIFFRACTION 1.64 Å
Organisms	Streptomyces avidinii
Macromolecule	STREPTAVIDIN (protein)
Unique Ligands	LH4

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4CPI \| pdb_00004cpi	Download File View File

streptavidin A86D mutant with love-hate ligand 4

Fairhead, M., Shen, D., Chan, L.K.M., Lowe, E.D., Donohoe, T.J., Howarth, M.

(2014) Bioorg Med Chem 22: 5476

Released	2014-08-06
Method	X-RAY DIFFRACTION 1.54 Å
Organisms	Streptomyces avidinii
Macromolecule	STREPTAVIDIN (protein)
Unique Ligands	CA, LH4, PEG

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7BV1 \| pdb_00007bv1	Download File View File

Cryo-EM structure of the apo nsp12-nsp7-nsp8 complex

Yin, W., Mao, C., Luan, X., Shen, D., Shen, Q., Su, H., Wang, X., Zhou, F., Zhao, W., Gao, M., Chang, S., Xie, Y.C., Tian, G., Jiang, H.W., Tao, S.C., Shen, J., Jiang, Y., Jiang, H., Xu, Y., Zhang, S., Zhang, Y., Xu, H.E.

(2020) Science 368: 1499-1504

Released	2020-04-22
Method	ELECTRON MICROSCOPY 2.8 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Non-structural protein 7 (protein) Non-structural protein 8 (protein) RNA-directed RNA polymerase (protein)
Unique Ligands	ZN

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7BV2 \| pdb_00007bv2	Download File View File

The nsp12-nsp7-nsp8 complex bound to the template-primer RNA and triphosphate form of Remdesivir(RTP)

Yin, W., Mao, C., Luan, X., Shen, D., Shen, Q., Su, H., Wang, X., Zhou, F., Zhao, W., Gao, M., Chang, S., Xie, Y.C., Tian, G., Jiang, H.W., Tao, S.C., Shen, J., Jiang, Y., Jiang, H., Xu, Y., Zhang, S., Zhang, Y., Xu, H.E.

(2020) Science 368: 1499-1504

Released	2020-04-22
Method	ELECTRON MICROSCOPY 2.5 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Non-structural protein 7 (protein) Non-structural protein 8 (protein) RNA-directed RNA polymerase (protein) Primer (nucleic acid) Templete (nucleic acid)
Unique Ligands	F86, MG, POP, ZN

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7C7Q \| pdb_00007c7q	Download File View File

Cryo-EM structure of the baclofen/BHFF-bound human GABA(B) receptor in active state

Mao, C., Shen, C., Li, C., Shen, D., Xu, C., Zhang, S., Zhou, R., Shen, Q., Chen, L., Jiang, Z., Liu, J., Zhang, Y.

(2020) Cell Res 30: 564-573

Released	2020-07-01
Method	ELECTRON MICROSCOPY 3 Å
Organisms	Homo sapiens
Macromolecule	Gamma-aminobutyric acid type B receptor subunit 1 (protein) Gamma-aminobutyric acid type B receptor subunit 2 (protein)
Unique Ligands	2C0, FN0, NAG

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7C7S \| pdb_00007c7s	Download File View File

Cryo-EM structure of the CGP54626-bound human GABA(B) receptor in inactive state.

Mao, C., Shen, C., Li, C., Shen, D., Xu, C., Zhang, S., Zhou, R., Shen, Q., Chen, L., Jiang, Z., Liu, J., Zhang, Y.

(2020) Cell Res 30: 564-573

Released	2020-07-01
Method	ELECTRON MICROSCOPY 2.9 Å
Organisms	Homo sapiens
Macromolecule	Gamma-aminobutyric acid type B receptor subunit 1 (protein) Gamma-aminobutyric acid type B receptor subunit 2 (protein)
Unique Ligands	2BV, NAG

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7CFM \| pdb_00007cfm	Download File View File

Cryo-EM structure of the P395-bound GPBAR-Gs complex

Yang, F., Mao, C., Guo, L., Lin, J., Ming, Q., Xiao, P., Wu, X., Shen, Q., Guo, S., Shen, D., Lu, R., Zhang, L., Huang, S., Ping, Y., Zhang, C., Ma, C., Zhang, K., Liang, X., Shen, Y., Nan, F., Yi, F., Luca, V., Zhou, J., Jiang, C., Sun, J., Xie, X., Yu, X., Zhang, Y.

(2020) Nature 587: 499-504

Released	2020-09-09
Method	ELECTRON MICROSCOPY 3 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	G-protein coupled bile acid receptor 1 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (protein) Guanine nucleotide-binding protein G(s) subunit alpha isoforms short (protein) Nanobody-35 (protein)
Unique Ligands	CLR, FWX

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7CFN \| pdb_00007cfn	Download File View File

Cryo-EM structure of the INT-777-bound GPBAR-Gs complex

Yang, F., Mao, C., Guo, L., Lin, J., Ming, Q., Xiao, P., Wu, X., Shen, Q., Guo, S., Shen, D., Lu, R., Zhang, L., Huang, S., Ping, Y., Zhang, C., Ma, C., Zhang, K., Liang, X., Shen, Y., Nan, F., Yi, F., Luca, V., Zhou, J., Jiang, C., Sun, J., Xie, X., Yu, X., Zhang, Y.

(2020) Nature 587: 499-504

Released	2020-09-09
Method	ELECTRON MICROSCOPY 3 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	G-protein coupled bile acid receptor 1 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (protein) Guanine nucleotide-binding protein G(s) subunit alpha isoforms short (protein) Nanobody-35 (protein)
Unique Ligands	CLR, FX0, PLM

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7CX2 \| pdb_00007cx2	Download File View File

Cryo-EM structure of the PGE2-bound EP2-Gs complex

Qu, C., Mao, C., Xiao, P., Shen, Q., Zhong, Y., Yang, F., Shen, D., Tao, X., Zhang, H., Yan, X., Zhao, R., He, J., Guan, Y., Zhang, C., Hou, G., Zhang, P., Yu, X., Guan, Y., Sun, J., Zhang, Y.

(2021) Sci Adv 7:

Released	2021-05-05
Method	ELECTRON MICROSCOPY 2.8 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (protein) Guanine nucleotide-binding protein G(s) subunit alpha isoforms short (protein) Nanobody-35 (protein) Prostaglandin E2 receptor EP2 subtype (protein)
Unique Ligands	P2E

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7CX3 \| pdb_00007cx3	Download File View File

Cryo-EM structure of the Taprenepag-bound EP2-Gs complex

Qu, C., Mao, C., Xiao, P., Shen, Q., Zhong, Y., Yang, F., Shen, D., Tao, X., Zhang, H., Yan, X., Zhao, R., He, J., Guan, Y., Zhang, C., Hou, G., Zhang, P., Yu, X., Guan, Y., Sun, J., Zhang, Y.

(2021) Sci Adv 7:

Released	2021-05-05
Method	ELECTRON MICROSCOPY 2.8 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (protein) Guanine nucleotide-binding protein G(s) subunit alpha isoforms short (protein) Nanobody-35 (protein) Prostaglandin E2 receptor EP2 subtype (protein)
Unique Ligands	GNO

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7CX4 \| pdb_00007cx4	Download File View File

Cryo-EM structure of the Evatanepag-bound EP2-Gs complex

Qu, C., Mao, C., Xiao, P., Shen, Q., Zhong, Y., Yang, F., Shen, D., Tao, X., Zhang, H., Yan, X., Zhao, R., He, J., Guan, Y., Zhang, C., Hou, G., Zhang, P., Yu, X., Guan, Y., Sun, J., Zhang, Y.

(2021) Sci Adv 7:

Released	2021-05-05
Method	ELECTRON MICROSCOPY 2.9 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (protein) Guanine nucleotide-binding protein G(s) subunit alpha isoforms short (protein) Nanobody-35 (protein) Prostaglandin E2 receptor EP2 subtype (protein)
Unique Ligands	GM9

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7CZ5 \| pdb_00007cz5	Download File View File

Cryo-EM structure of the human growth hormone-releasing hormone receptor-Gs protein complex

Zhou, F., Zhang, H., Cong, Z., Zhao, L., Zhou, Q., Mao, C., Cheng, X., Shen, D., Cai, X., Ma, C., Wang, Y., Dai, A., Zhou, Y., Sun, W., Zhao, F., Zhao, S., Jiang, H., Jiang, Y., Yang, D., Xu, H.E., Zhang, Y., Wang, M.

(2020) Nat Commun 11: 5205-5205

Released	2020-11-18
Method	ELECTRON MICROSCOPY 2.6 Å
Organisms	Bos taurus Homo sapiens Rattus norvegicus synthetic construct
Macromolecule	Unique protein chains: 6
Unique Ligands	CLR, PLM

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7D68 \| pdb_00007d68	Download File View File

Cryo-EM structure of the human glucagon-like peptide-2 receptor-Gs protein complex

Sun, W., Chen, L., Zhou, Q., Zhao, L., Zhang, H., Cong, Z., Shen, D., Zhao, F., Zhou, F., Cai, X., Chen, Y., Zhou, Y., Gadgaard, S., van der Velden, W.J., Zhao, S., Jiang, Y., Rosenkilde, M.M., Yang, D., Xu, H.E., Zhang, Y., Wang, M.

(2020) Cell Res 30: 1098-1108

Released	2020-12-16
Method	ELECTRON MICROSCOPY 3 Å
Organisms	Bos taurus Homo sapiens synthetic construct
Macromolecule	Unique protein chains: 6

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7D76 \| pdb_00007d76	Download File View File

Cryo-EM structure of the beclomethasone-bound adhesion receptor GPR97-Go complex

Ping, Y., Mao, C., Xiao, P., Zhao, R., Jiang, Y., Yang, Z., An, W., Shen, D., Yang, F., Zhang, H., Qu, C., Shen, Q., Tian, C., Li, Z., Li, S., Wang, G., Tao, X., Wen, X., Zhong, Y., Yang, J., Yi, F., Yu, X., Xu, E., Zhang, Y., Sun, J.

(2021) Nature 589: 620-626

Released	2021-02-03
Method	ELECTRON MICROSCOPY 3.1 Å
Organisms	Homo sapiens
Macromolecule	Adhesion G protein-coupled receptor G3; GPR97 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (protein) Guanine nucleotide-binding protein G(o) subunit alpha (protein)
Unique Ligands	CLR, GXR, PLM, Y01

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7D77 \| pdb_00007d77	Download File View File

Cryo-EM structure of the cortisol-bound adhesion receptor GPR97-Go complex

Ping, Y., Mao, C., Xiao, P., Zhao, R., Jiang, Y., Yang, Z., An, W., Shen, D., Yang, F., Zhang, H., Qu, C., Shen, Q., Tian, C., Li, Z., Li, S., Wang, G., Tao, X., Wen, X., Zhong, Y., Yang, J., Yi, F., Yu, X., Xu, E., Zhang, Y., Sun, J.

(2021) Nature 589: 620-626

Released	2021-02-03
Method	ELECTRON MICROSCOPY 2.9 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Adhesion G protein-coupled receptor G3; GPR97 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (protein) Guanine nucleotide-binding protein G(o) subunit alpha (protein) scFv16 (protein)
Unique Ligands	CLR, HCY, PLM, Y01

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7EB2 \| pdb_00007eb2	Download File View File

Cryo-EM structure of human GABA(B) receptor-Gi protein complex

Shen, C., Mao, C., Xu, C., Jin, N., Zhang, H., Shen, D., Shen, Q., Wang, X., Hou, T., Rondard, P., Chen, Z., Pin, J., Zhang, Y., Liu, J.

(2021) Nature 594: 594-598

Released	2021-05-05
Method	ELECTRON MICROSCOPY 3.5 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Unique protein chains: 6
Unique Ligands	2C0, FN0

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7F53 \| pdb_00007f53	Download File View File

Cryo-EM structure of a-MSH-MC4R-Gs_Nb35 complex

Zhang, H., Chen, L., Mao, C., Shen, Q., Yang, D., Shen, D., Qin, J.

(2021) Cell Res 31: 1163-1175

Released	2021-11-03
Method	ELECTRON MICROSCOPY 3 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Unique protein chains: 6
Unique Ligands	CA

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7F54 \| pdb_00007f54	Download File View File

Cryo-EM structure of afamelanotide-MC4R-Gs_Nb35 complex

Zhang, H., Chen, L., Mao, C., Shen, Q., Yang, D., Shen, D., Qin, J.

(2021) Cell Res 31: 1163-1175

Released	2021-11-03
Method	ELECTRON MICROSCOPY 3 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Unique protein chains: 6
Unique Ligands	CA

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7F55 \| pdb_00007f55	Download File View File

Cryo-EM structure of bremelanotide-MC4R-Gs_Nb35 complex

Zhang, H., Chen, L., Mao, C., Shen, Q., Yang, D., Shen, D., Qin, J.

(2021) Cell Res 31: 1163-1175

Released	2021-11-03
Method	ELECTRON MICROSCOPY 3.1 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Unique protein chains: 6
Unique Ligands	CA

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7F58 \| pdb_00007f58	Download File View File

Cryo-EM structure of THIQ-MC4R-Gs_Nb35 complex

Zhang, H., Chen, L., Mao, C., Shen, Q., Yang, D., Shen, D., Qin, J.

(2021) Cell Res 31: 1163-1175

Released	2021-11-03
Method	ELECTRON MICROSCOPY 3.1 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (protein) Isoform Gnas-2 of Guanine nucleotide-binding protein G(s) subunit alpha isoforms short (protein) Melanocortin receptor 4 (protein) Nanobody35 (protein)
Unique Ligands	1I8, CA

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7TRY \| pdb_00007try	Download File View File

Cryo-EM structure of corticotropin releasing factor receptor 2 bound to Urocortin 1 and coupled with heterotrimeric G11 protein

Zhao, L.-H., Lin, J., Mao, C., Zhou, X.E., Ji, S., Shen, D., Xiao, P., Melcher, K., Zhang, Y., Yu, X., Xu, H.E.

(2022) Nat Commun 13: 6670-6670

Released	2022-11-09
Method	ELECTRON MICROSCOPY 3.7 Å
Organisms	Homo sapiens Rattus norvegicus synthetic construct
Macromolecule	Unique protein chains: 6

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

2N6F | pdb_00002n6f

2VSN | pdb_00002vsn

4CPE | pdb_00004cpe

4CPF | pdb_00004cpf

4CPH | pdb_00004cph

4CPI | pdb_00004cpi

7BV1 | pdb_00007bv1

7BV2 | pdb_00007bv2

7C7Q | pdb_00007c7q

7C7S | pdb_00007c7s

7CFM | pdb_00007cfm

7CFN | pdb_00007cfn

7CX2 | pdb_00007cx2

7CX3 | pdb_00007cx3

7CX4 | pdb_00007cx4

7CZ5 | pdb_00007cz5

7D68 | pdb_00007d68

7D76 | pdb_00007d76

7D77 | pdb_00007d77

7EB2 | pdb_00007eb2

7F53 | pdb_00007f53

7F54 | pdb_00007f54

7F55 | pdb_00007f55

7F58 | pdb_00007f58

7TRY | pdb_00007try