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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Sun, F."

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Search Summary

This query matches 133 Structures.

Refinements

Structure Determination Methodology

experimental (133)

Scientific Name of Source Organism

	Homo sapiens (50)
	Severe acute respiratory syndrome coronavirus 2 (14)
	Aspergillus terreus (7)
	Mus musculus (7)
	African swine fever virus (6)
	Acidianus tengchongensis (5)
	Caenorhabditis elegans (5)
	Saccharomyces cerevisiae S288C (4)
	Sus scrofa (4)
	Rabbit hemorrhagic disease virus (3)

More...

Taxonomy

	Eukaryota (88)
	Riboviria (25)
	Bacteria (8)
	Varidnaviria (7)
	Archaea (6)
	other sequences (1)

Experimental Method

	X-RAY DIFFRACTION (69)
	ELECTRON MICROSCOPY (64)

Polymer Entity Type

	Protein (133)
	DNA (1)
	RNA (1)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (14)
	2.0 - 2.5 (37)
	2.5 - 3.0 (21)
	3.0 - 3.5 (18)
	3.5 - 4.0 (18)
	4.0 - 4.5 (5)
	> 4.5 (19)

Release Date

	2000 - 2004 (2)
	2005 - 2009 (13)
	2010 - 2014 (42)
	2015 - 2019 (19)
	2020 - 2024 (51)
	2025 - 2029 (6)

Enzyme Classification Name

	Oxidoreductases (17)
	Hydrolases (17)
	Transferases (11)
	Isomerases (3)
	Lyases (2)

Membrane Protein Annotation

	PDBTM (21)
	mpstruc (18)
	MemProtMD (16)
	OPM (16)

Symmetry Type

	Asymmetric (50)
	Cyclic (41)
	Dihedral (29)
	Helical (6)
	Icosahedral (4)
	Tetrahedral (2)
	Octahedral (3)

SCOP Classification

	All alpha proteins (12)
	Small proteins (2)
	Alpha and beta proteins (a/b) (12)
	All beta proteins (10)
	Alpha and beta proteins (a+b) (7)
	Artifacts (5)
	Membrane and cell surface proteins and peptides (3)

AllSelected

1 to 25 of 133 Structures

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1GHE \| pdb_00001ghe	Download File View File

CRYSTAL STRUCTURE OF TABTOXIN RESISTANCE PROTEIN COMPLEXED WITH AN ACYL COENZYME A

He, H., Ding, Y., Bartlam, M., Sun, F., Le, Y., Qin, X., Tang, H., Zhang, R., Joachimiak, A., Liu, Y., Zhao, N., Rao, Z.

(2003) J Mol Biology 325: 1019-1030

Released	2003-01-14
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Pseudomonas amygdali pv. tabaci
Macromolecule	ACETYLTRANSFERASE (protein)
Unique Ligands	ACO

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1KU5 \| pdb_00001ku5	Download File View File

Crystal Structure of recombinant histone HPhA from hyperthermophilic archaeon Pyrococcus horikoshii OT3

Li, T., Sun, F., Ji, X., Feng, Y., Rao, Z.

(2003) J Mol Biology 325: 1031-1037

Released	2003-08-26
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Pyrococcus horikoshii
Macromolecule	HPhA (protein)
Unique Ligands	ACT, SO4

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1ZOY \| pdb_00001zoy	Download File View File

Crystal Structure of Mitochondrial Respiratory Complex II from porcine heart at 2.4 Angstroms

Sun, F., Huo, X., Zhai, Y., Wang, A., Xu, J., Su, D., Bartlam, M., Rao, Z.

(2005) Cell 121: 1043-1057

Released	2005-07-12
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Sus scrofa
Macromolecule	FAD-binding protein (protein) Iron-sulfur protein (protein) Large cytochrome binding protein (protein) Small cytochrome binding protein (protein)
Unique Ligands	EPH, F3S, FAD, FES, HEM, SF4, UQ1

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1ZP0 \| pdb_00001zp0	Download File View File

Crystal Structure of Mitochondrial Respiratory Complex II bound with 3-nitropropionate and 2-thenoyltrifluoroacetone

Sun, F., Huo, X., Zhai, Y., Wang, A., Xu, J., Su, D., Bartlam, M., Rao, Z.

(2005) Cell 121: 1043-1057

Released	2005-07-12
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Sus scrofa
Macromolecule	FAD-binding protein (protein) Iron-sulfur protein (protein) Large cytochrome binding protein (protein) Small cytochrome binding protein (protein)
Unique Ligands	3NP, F3S, FAD, FES, HEM, SF4, TTF

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2AHM \| pdb_00002ahm	Download File View File

Crystal structure of SARS-CoV super complex of non-structural proteins: the hexadecamer

Zhai, Y.J., Sun, F., Bartlam, M., Rao, Z.

(2005) Nat Struct Mol Biol 12: 980-986

Released	2005-11-15
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Severe acute respiratory syndrome-related coronavirus
Macromolecule	Replicase polyprotein 1ab, heavy chain (protein) Replicase polyprotein 1ab, light chain (protein)
Unique Ligands	GOL, SO4

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2G9T \| pdb_00002g9t	Download File View File

Crystal structure of the SARS coronavirus nsp10 at 2.1A

Su, D., Lou, Z., Yang, H., Sun, F., Rao, Z.

(2006) J Virol 80: 7902-7908

Released	2006-08-15
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Severe acute respiratory syndrome-related coronavirus
Macromolecule	orf1a polyprotein (protein)
Unique Ligands	ZN

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2GA6 \| pdb_00002ga6	Download File View File

The crystal structure of SARS nsp10 without zinc ion as additive

Su, D., Lou, Z., Sun, F., Zhai, Y., Yang, H., Rao, Z.

(2006) J Virol 80: 7902-7908

Released	2006-08-15
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Severe acute respiratory syndrome-related coronavirus
Macromolecule	orf1a polyprotein (protein)
Unique Ligands	ZN

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2GTH \| pdb_00002gth	Download File View File

crystal structure of the wildtype MHV coronavirus non-structural protein nsp15

Xu, X., Zhai, Y., Sun, F., Lou, Z., Su, D., Rao, Z.

(2006) J Virol 80: 7909-7917

Released	2006-08-15
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Murine hepatitis virus strain A59
Macromolecule	Replicase polyprotein 1ab (protein)

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2GTI \| pdb_00002gti	Download File View File

mutation of MHV coronavirus non-structural protein nsp15 (F307L)

Xu, X., Zhai, Y., Sun, F., Lou, Z., Su, D., Rao, Z.

(2006) J Virol 80: 7909-7917

Released	2006-08-15
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Murine hepatitis virus strain A59
Macromolecule	Replicase polyprotein 1ab (protein)
Unique Ligands	GOL, SO4

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2R2J \| pdb_00002r2j	Download File View File

crystal structure of human ERp44

Wang, L.K., Li, S.J., Sun, F., Wang, C.C.

(2008) EMBO Rep

Released	2008-07-08
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	Thioredoxin domain-containing protein 4 (protein)
Unique Ligands	FMT, SIN

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2ZGC \| pdb_00002zgc	Download File View File

Crystal Structure of Active Human Granzyme M

Wu, L.F., Wang, L., Hua, G.Q., Liu, K., Zhai, Y.J., Sun, F., Fan, Z.S.

(2009) J Immunol 183: 421-429

Released	2009-01-27
Method	X-RAY DIFFRACTION 1.96 Å
Organisms	Homo sapiens
Macromolecule	Granzyme M (protein)
Unique Ligands	SO4

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2ZGH \| pdb_00002zgh	Download File View File

Crystal Structure of active granzyme M bound to its product

Wu, L.F., Wang, L., Hua, G.Q., Liu, K., Zhai, Y.J., Sun, F., Fan, Z.S.

(2009) J Immunol 183: 421-429

Released	2009-01-27
Method	X-RAY DIFFRACTION 2.17 Å
Organisms	Homo sapiens
Macromolecule	Granzyme M (protein) SSGKVPL (protein)
Unique Ligands	SO4

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2ZGJ \| pdb_00002zgj	Download File View File

Crystal Structure of D86N-GzmM Complexed with Its Optimal Synthesized Substrate

Wu, L.F., Wang, L., Hua, G.Q., Liu, K., Zhai, Y.J., Sun, F., Fan, Z.S.

(2009) J Immunol 183: 421-429

Released	2009-01-27
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Granzyme M (protein) SSGKVPLS (protein)
Unique Ligands	SO4

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2ZKS \| pdb_00002zks	Download File View File

Structural insights into the proteolytic machinery of apoptosis-inducing Granzyme M

Wu, L.F., Wang, L., Hua, G.Q., Liu, K., Yang, X., Zhai, Y.J., Sun, F., Fan, Z.S.

(2009) J Immunol 183: 421-429

Released	2009-03-31
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens
Macromolecule	Granzyme M (protein) hGzmM inhibitor (protein)
Unique Ligands	SO4

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3A2A \| pdb_00003a2a	Download File View File

The structure of the carboxyl-terminal domain of the human voltage-gated proton channel Hv1

Li, S.J., Unno, H., Zhou, Q., Zhao, Q., Zhai, Y., Sun, F.

(2010) J Biological Chem 285: 12047-12054

Released	2010-02-09
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Voltage-gated hydrogen channel 1 (protein)
Unique Ligands	CL

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3F3H \| pdb_00003f3h	Download File View File

Crystal structure and anti-tumor activity of LZ-8 from the fungus Ganoderma lucidium

Zhou, C.Z., Huang, L., He, Y.X., Bao, R., Sun, F., Liang, C., Liu, L.

(2009) Proteins 75: 524-527

Released	2009-09-15
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Ganoderma lucidum
Macromolecule	Immunomodulatory protein Ling Zhi-8 (protein)

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3IZ3 \| pdb_00003iz3	Download File View File

CryoEM structure of cytoplasmic polyhedrosis virus

Cheng, L., Sun, J., Zhang, K., Mou, Z., Huang, X., Ji, G., Sun, F., Zhang, J., Zhu, P.

(2011) Proc Natl Acad Sci U S A 108: 1373-1378

Released	2011-03-16
Method	ELECTRON MICROSCOPY 3.9 Å
Organisms	Bombyx mori cypovirus 1
Macromolecule	Structural protein VP1 (protein) Structural protein VP3 (protein) Viral structural protein 5 (protein)

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3J17 \| pdb_00003j17	Download File View File

Structure of a transcribing cypovirus by cryo-electron microscopy

Yang, C., Ji, G., Liu, H., Zhang, K., Liu, G., Sun, F., Zhu, P., Cheng, L.

(2012) Proc Natl Acad Sci U S A 109: 6118-6123

Released	2012-04-04
Method	ELECTRON MICROSCOPY 4.1 Å
Organisms	Bombyx mori cypovirus 1
Macromolecule	Structural protein VP3 (protein) Structural protein VP5 (protein) VP1 (protein)

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3J1B \| pdb_00003j1b	Download File View File

Cryo-EM structure of 8-fold symmetric rATcpn-alpha in apo state

Zhang, K., Wang, L., Liu, Y.X., Wang, X., Gao, B., Hu, Z.J., Ji, G., Chan, K.Y., Schulten, K., Dong, Z.Y., Sun, F.

(2013) Protein Cell 4: 432-444

Released	2013-08-07
Method	ELECTRON MICROSCOPY 4.9 Å
Organisms	Acidianus tengchongensis
Macromolecule	Chaperonin alpha subunit (protein)

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3J1C \| pdb_00003j1c	Download File View File

Cryo-EM structure of 9-fold symmetric rATcpn-alpha in apo state

Zhang, K., Wang, L., Liu, Y.X., Wang, X., Gao, B., Hu, Z.J., Ji, G., Chan, K.Y., Schulten, K., Dong, Z.Y., Sun, F.

(2013) Protein Cell 4: 432-444

Released	2013-08-07
Method	ELECTRON MICROSCOPY 9.1 Å
Organisms	Acidianus tengchongensis
Macromolecule	Chaperonin alpha subunit (protein)

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3J1E \| pdb_00003j1e	Download File View File

Cryo-EM structure of 9-fold symmetric rATcpn-beta in apo state

Zhang, K., Wang, L., Liu, Y.X., Wang, X., Gao, B., Hu, Z.J., Ji, G., Chan, K.Y., Schulten, K., Dong, Z.Y., Sun, F.

(2013) Protein Cell 4: 432-444

Released	2013-08-07
Method	ELECTRON MICROSCOPY 8.3 Å
Organisms	Acidianus tengchongensis
Macromolecule	Chaperonin beta subunit (protein)

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3J1F \| pdb_00003j1f	Download File View File

Cryo-EM structure of 9-fold symmetric rATcpn-beta in ATP-binding state

Zhang, K., Wang, L., Liu, Y.X., Wang, X., Gao, B., Hu, Z.J., Ji, G., Chan, K.Y., Schulten, K., Dong, Z.Y., Sun, F.

(2013) Protein Cell 4: 432-444

Released	2013-08-07
Method	ELECTRON MICROSCOPY 6.2 Å
Organisms	Acidianus tengchongensis
Macromolecule	Chaperonin beta subunit (protein)
Unique Ligands	ATP, MG

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3J1P \| pdb_00003j1p	Download File View File

Atomic model of rabbit hemorrhagic disease virus

Wang, X., Liu, Y., Sun, F.

(2013) PLoS Pathog 9: e1003132-e1003132

Released	2013-01-30
Method	ELECTRON MICROSCOPY 6.5 Å
Organisms	Rabbit hemorrhagic disease virus
Macromolecule	Major capsid protein VP60 (protein)

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3JUE \| pdb_00003jue	Download File View File

Crystal Structure of ArfGAP and ANK repeat domain of ACAP1

Pang, X., Zhang, K., Ma, J., Zhou, Q., Sun, F.

(2012) J Biological Chem 287: 28675-28685

Released	2010-09-22
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	ARFGAP with coiled-coil, ANK repeat and PH domain-containing protein 1 (protein)
Unique Ligands	SO4, ZN

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3K6J \| pdb_00003k6j	Download File View File

Crystal structure of the dehydrogenase part of multifuctional enzyme 1 from C.elegans

Ouyang, Z., Zhang, K., Zhai, Y., Lu, J., Sun, F.

To be published

Released	2010-10-13
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Caenorhabditis elegans
Macromolecule	Protein F01G10.3, confirmed by transcript evidence (protein)
Unique Ligands	PO4, ZN

1 to 25 of 133 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1GHE | pdb_00001ghe

1KU5 | pdb_00001ku5

1ZOY | pdb_00001zoy

1ZP0 | pdb_00001zp0

2AHM | pdb_00002ahm

2G9T | pdb_00002g9t

2GA6 | pdb_00002ga6

2GTH | pdb_00002gth

2GTI | pdb_00002gti

2R2J | pdb_00002r2j

2ZGC | pdb_00002zgc

2ZGH | pdb_00002zgh

2ZGJ | pdb_00002zgj

2ZKS | pdb_00002zks

3A2A | pdb_00003a2a

3F3H | pdb_00003f3h

3IZ3 | pdb_00003iz3

3J17 | pdb_00003j17

3J1B | pdb_00003j1b

3J1C | pdb_00003j1c

3J1E | pdb_00003j1e

3J1F | pdb_00003j1f

3J1P | pdb_00003j1p

3JUE | pdb_00003jue

3K6J | pdb_00003k6j