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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Tereshko, V."

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Search Summary

This query matches 120 Structures.

Refinements

Structure Determination Methodology

experimental (120)

Scientific Name of Source Organism

	Homo sapiens (11)
	Bos taurus (9)
	Camelus dromedarius (9)
	Escherichia coli (6)
	Geobacillus stearothermophilus (4)
	Mus musculus (4)
	Blastochloris viridis (3)
	Hypogastrura harveyi (3)
	Borreliella burgdorferi (2)
	Crambe hispanica subsp. abyssinica (2)

More...

Taxonomy

	Eukaryota (31)
	Bacteria (17)
	Eukaryota (eukaryotes) (7)
	other sequences (1)

Experimental Method

X-RAY DIFFRACTION (120)

Polymer Entity Type

	Protein (58)
	DNA (48)
	RNA (13)
	NA-hybrid (5)

Refinement Resolution (Å)

	0.5 - 1.0 (4)
	1.0 - 1.5 (27)
	1.5 - 2.0 (42)
	2.0 - 2.5 (21)
	2.5 - 3.0 (12)
	3.0 - 3.5 (12)
	3.5 - 4.0 (2)

Release Date

	1995 - 1999 (25)
	2000 - 2004 (38)
	2005 - 2009 (57)

Enzyme Classification Name

	Transferases (12)
	Hydrolases (13)
	Lyases (10)

Membrane Protein Annotation

	MemProtMD (3)
	PDBTM (3)
	OPM (3)

Symmetry Type

	Asymmetric (51)
	Cyclic (8)
	Helical (2)

SCOP Classification

	Alpha and beta proteins (a+b) (20)
	All beta proteins (19)
	Artifacts (9)
	Designed proteins (6)
	Membrane and cell surface proteins and peptides (3)
	All alpha proteins (5)
	Alpha and beta proteins (a/b) (5)
	Multi-domain proteins (alpha and beta) (4)
	Small proteins (2)

AllSelected

1 to 25 of 120 Structures

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1CS7 \| pdb_00001cs7	Download File View File

SYNTHETIC DNA HAIRPIN WITH STILBENEDIETHER LINKER

Lewis, F.D., Liu, X., Wu, Y., Miller, S.E., Wasielewski, M.R., Letsinger, R.L., Sanishvili, R., Joachimiak, A., Tereshko, V., Egli, M.

(1999) J Am Chem Soc 121: 9905-9906

Released	2001-10-19
Method	X-RAY DIFFRACTION 3.2 Å
Macromolecule	5'-D(GP(BRU)PTPTPTPGP(S02)CPAPAPAPAPC)-3' (nucleic acid)
Unique Ligands	SR

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1D8Y \| pdb_00001d8y	Download File View File

CRYSTAL STRUCTURE OF THE COMPLEX OF DNA POLYMERASE I KLENOW FRAGMENT WITH DNA

Teplova, M., Wallace, S.T., Tereshko, V., Minasov, G., Simons, A.M., Cook, P.D., Manoharan, M., Egli, M.

(1999) Proc Natl Acad Sci U S A 96: 14240-14245

Released	1999-12-02
Method	X-RAY DIFFRACTION 2.08 Å
Organisms	Escherichia coli
Macromolecule	DNA POLYMERASE I (protein) D(T)19 OLIGOMER (nucleic acid)
Unique Ligands	SO4, ZN

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1D9D \| pdb_00001d9d	Download File View File

CRYSTALL STRUCTURE OF THE COMPLEX OF DNA POLYMERASE I KLENOW FRAGMENT WITH SHORT DNA FRAGMENT CARRYING 2'-0-AMINOPROPYL-RNA MODIFICATIONS 5'-D(TCG)-AP(AUC)-3'

Teplova, M., Wallace, S.T., Tereshko, V., Minasov, G., Simons, A.M., Cook, P.D., Manoharan, M., Egli, M.

(1999) Proc Natl Acad Sci U S A 96: 14240-14245

Released	1999-12-02
Method	X-RAY DIFFRACTION 2.18 Å
Organisms	Escherichia coli
Macromolecule	DNA POLYMERASE I (protein) 5'-D(TPCPGP)-R(AP(U31)P*(C31))-3' (hybrid)
Unique Ligands	MG, SO4, ZN

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1D9F \| pdb_00001d9f	Download File View File

CRYSTAL STRUCTURE OF THE COMPLEX OF DNA POLYMERASE I KLENOW FRAGMENT WITH DNA TETRAMER CARRYING 2'-O-(3-AMINOPROPYL)-RNA MODIFICATION 5'-D(TT)-AP(U)-D(T)-3'

Teplova, M., Wallace, S.T., Tereshko, V., Minasov, G., Simons, A.M., Cook, P.D., Manoharan, M., Egli, M.

(1999) Proc Natl Acad Sci U S A 96: 14240-14245

Released	1999-12-02
Method	X-RAY DIFFRACTION 3 Å
Organisms	Escherichia coli
Macromolecule	DNA POLYMERASE I (protein) DNA/RNA (5'-D(TPTP)-R((U31)P)-D(T)-3') (hybrid)
Unique Ligands	SO4, ZN

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1D9H \| pdb_00001d9h	Download File View File

Structural origins of the exonuclease resistance of a zwitterionic RNA

Teplova, M., Wallace, S.T., Tereshko, V., Minasov, G., Simons, A.M., Cook, P.D., Manoharan, M., Egli, M.

(1999) Proc Natl Acad Sci U S A 96: 14240-14245

Released	1999-12-02
Method	X-RAY DIFFRACTION 1.6 Å
Macromolecule	DNA/RNA (5'-D(GPCPGPTPAP)-R((U31)P)-D(APCPGPC)-3') (hybrid)

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1DPL \| pdb_00001dpl	Download File View File

A-DNA DECAMER GCGTA(T23)TACGC WITH INCORPORATED 2'-METHOXY-3'-METHYLENEPHOSPHATE-THYMIDINE

Egli, M., Tereshko, V., Teplova, M., Minasov, G., Joachimiak, A., Sanishvili, R., Weeks, C.M., Miller, R., Maier, M.A., An, H., Dan Cook, P., Manoharan, M.

(1998) Biopolymers 48: 234-252

Released	2000-04-04
Method	X-RAY DIFFRACTION 0.83 Å
Macromolecule	5'-D(GPCPGPTPAP(T23)PAPCPGPC)-3' (nucleic acid)
Unique Ligands	MG, SPM

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1DPN \| pdb_00001dpn	Download File View File

B-DODECAMER CGCGAA(TAF)TCGCG WITH INCORPORATED 2'-DEOXY-2'-FLUORO-ARABINO-FURANOSYL THYMINE

Egli, M., Tereshko, V., Teplova, M., Minasov, G., Joachimiak, A., Sanishvili, R., Weeks, C.M., Miller, R., Maier, M.A., An, H., Dan Cook, P., Manoharan, M.

(1998) Biopolymers 48: 234-252

Released	2000-04-04
Method	X-RAY DIFFRACTION 0.95 Å
Macromolecule	DNA (5'-D(CPGPCPGPAPAP(TAF)PTPCPGPCPG)-3') (nucleic acid)
Unique Ligands	MG

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1EH4 \| pdb_00001eh4	Download File View File

BINARY COMPLEX OF CASEIN KINASE-1 FROM S. POMBE WITH AN ATP COMPETITIVE INHIBITOR, IC261

Mashhoon, N., Demaggio, A.J., Tereshko, V., Bergmeier, S.C., Egli, M., Hoekstra, M.F., Kuret, J.

(2000) J Biological Chem 275: 20052-20060

Released	2001-09-19
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Schizosaccharomyces pombe
Macromolecule	CASEIN KINASE-1 (protein)
Unique Ligands	IC1, SO4

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1G6D \| pdb_00001g6d	Download File View File

STRUCTURE OF PEPTIDYL-D(CGCAATTGCG) IN THE PRESENCE OF ZINC IONS

Soler-Lopez, M., Malinina, L., Tereshko, V., Zarytova, V., Subirana, J.A.

(2002) J Biol Inorg Chem 7: 533-538

Released	2002-04-19
Method	X-RAY DIFFRACTION 2.9 Å
Macromolecule	PEPTIDYL-D(CGCAATTGCG) (nucleic acid)
Unique Ligands	ZN

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1HRU \| pdb_00001hru	Download File View File

THE STRUCTURE OF THE YRDC GENE PRODUCT FROM E.COLI

Teplova, M., Tereshko, V., Sanishvili, R., Joachimiak, A., Bushueva, T., Anderson, W.F., Egli, M., Midwest Center for Structural Genomics (MCSG)

(2000) Protein Sci 9: 2557-2566

Released	2001-01-31
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	YRDC GENE PRODUCT (protein)
Unique Ligands	PO4

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1I0F \| pdb_00001i0f	Download File View File

1.6 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-AMINOOXYETHYL THYMINE IN PLACE OF T6, BA-FORM

Tereshko, V., Wilds, C.J., Minasov, G., Prakash, T.P., Maier, M.A., Howard, A., Wawrzak, Z., Manoharan, M., Egli, M.

(2001) Nucleic Acids Res 29: 1208-1215

Released	2001-04-04
Method	X-RAY DIFFRACTION 1.6 Å
Macromolecule	5'-D(GPCPGPTPAP(127)PAPCPGPC)-3' (nucleic acid)
Unique Ligands	BA

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1I0G \| pdb_00001i0g	Download File View File

1.45 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-FLUOROETHYL THYMINE IN PLACE OF T6, MEDIUM NA-SALT

Tereshko, V., Wilds, C.J., Minasov, G., Prakash, T.P., Maier, M.A., Howard, A., Wawrzak, Z., Manoharan, M., Egli, M.

(2001) Nucleic Acids Res 29: 1208-1215

Released	2001-04-04
Method	X-RAY DIFFRACTION 1.45 Å
Macromolecule	5'-D(GPCPGPTPAP(125)PAPCPGPC)-3' (nucleic acid)
Unique Ligands	NA

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1I0J \| pdb_00001i0j	Download File View File

1.06 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-METHYL-3'-METHYLENEPHOSPHONATE (T23) THYMINE IN PLACE OF T6, HIGH CS-SALT

Tereshko, V., Wilds, C.J., Minasov, G., Prakash, T.P., Maier, M.A., Howard, A., Wawrzak, Z., Manoharan, M., Egli, M.

(2001) Nucleic Acids Res 29: 1208-1215

Released	2001-04-04
Method	X-RAY DIFFRACTION 1.06 Å
Macromolecule	5'-D(GPCPGPTPAP(T23)PAPCPGPC)-3' (nucleic acid)
Unique Ligands	CS

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1I0K \| pdb_00001i0k	Download File View File

1.05 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-METHYL-[TRI(OXYETHYL)] THYMINE IN PLACE OF T6, MEDIUM CS-SALT

Tereshko, V., Wilds, C.J., Minasov, G., Prakash, T.P., Maier, M.A., Howard, A., Wawrzak, Z., Manoharan, M., Egli, M.

(2001) Nucleic Acids Res 29: 1208-1215

Released	2001-04-04
Method	X-RAY DIFFRACTION 1.05 Å
Macromolecule	5'-D(GPCPGPTPAP(126)PAPCPGPC)-3' (nucleic acid)
Unique Ligands	CS

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1I0M \| pdb_00001i0m	Download File View File

1.05 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-FLUOROETHYL THYMINE IN PLACE OF T6, HIGH RB-SALT

Tereshko, V., Wilds, C.J., Minasov, G., Prakash, T.P., Maier, M.A., Howard, A., Wawrzak, Z., Manoharan, M., Egli, M.

(2001) Nucleic Acids Res 29: 1208-1215

Released	2001-04-04
Method	X-RAY DIFFRACTION 1.05 Å
Macromolecule	5'-D(GPCPGPTPAP(125)PAPCPGPC)-3' (nucleic acid)
Unique Ligands	RB

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1I0N \| pdb_00001i0n	Download File View File

1.3 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-METHYL-[TRI(OXYETHYL)] THYMINE IN PLACE OF T6, MEDIUM RB-SALT

Tereshko, V., Wilds, C.J., Minasov, G., Prakash, T.P., Maier, M.A., Howard, A., Wawrzak, Z., Manoharan, M., Egli, M.

(2001) Nucleic Acids Res 29: 1208-1215

Released	2001-04-04
Method	X-RAY DIFFRACTION 1.3 Å
Macromolecule	5'-D(GPCPGPTPAP(126)PAPCPGPC)-3' (nucleic acid)
Unique Ligands	RB

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1I0O \| pdb_00001i0o	Download File View File

1.6 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-METHYL-3'-METHYLENEPHOSPHONATE THYMINE IN PLACE OF T6, HIGH K-SALT

Tereshko, V., Wilds, C.J., Minasov, G., Prakash, T.P., Maier, M.A., Howard, A., Wawrzak, Z., Manoharan, M., Egli, M.

(2001) Nucleic Acids Res 29: 1208-1215

Released	2001-04-04
Method	X-RAY DIFFRACTION 2 Å
Macromolecule	5'-D(GPCPGPTPAP(T23)PAPCPGPC)-3' (nucleic acid)
Unique Ligands	K

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1I0P \| pdb_00001i0p	Download File View File

1.3 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-METHYL-[TRI(OXYETHYL)], MEDIUM K-SALT

Tereshko, V., Wilds, C.J., Minasov, G., Prakash, T.P., Maier, M.A., Howard, A., Wawrzak, Z., Manoharan, M., Egli, M.

(2001) Nucleic Acids Res 29: 1208-1215

Released	2001-04-04
Method	X-RAY DIFFRACTION 1.3 Å
Macromolecule	5'-D(GPCPGPTPAP(126)PAPCPGPC)-3' (nucleic acid)
Unique Ligands	K

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1I0Q \| pdb_00001i0q	Download File View File

1.3 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-METHYL-[TRI(OXYETHYL)] THYMINE IN PLACE OF T6, MEDIUM NA-SALT

Tereshko, V., Wilds, C.J., Minasov, G., Prakash, T.P., Maier, M.A., Howard, A., Wawrzak, Z., Manoharan, M., Egli, M.

(2001) Nucleic Acids Res 29: 1208-1215

Released	2001-04-04
Method	X-RAY DIFFRACTION 1.3 Å
Macromolecule	5'-D(GPCPGPTPAP(126)PAPCPGPC)-3' (nucleic acid)
Unique Ligands	NA

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1I0T \| pdb_00001i0t	Download File View File

0.6 A STRUCTURE OF Z-DNA CGCGCG

Tereshko, V., Wilds, C.J., Minasov, G., Prakash, T.P., Maier, M.A., Howard, A., Wawrzak, Z., Manoharan, M., Egli, M.

(2001) Nucleic Acids Res 29: 1208-1215

Released	2001-04-04
Method	X-RAY DIFFRACTION 0.6 Å
Macromolecule	5'-D(CPGPCPGPCPG)-3' (nucleic acid)
Unique Ligands	SPM

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1I2X \| pdb_00001i2x	Download File View File

2.4 A STRUCTURE OF A-DUPLEX WITH BULGED ADENOSINE, SPERMIDINE FORM

Tereshko, V., Wallace, S., Usman, N., Wincott, F., Egli, M.

(2001) RNA 7: 405-420

Released	2001-04-21
Method	X-RAY DIFFRACTION 2.4 Å
Macromolecule	DNA/RNA (5'-R(GPCPG)-D(PAPTPAPT)-R(PAPCPGP*U)-3') (hybrid)
Unique Ligands	SPD

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1I2Y \| pdb_00001i2y	Download File View File

1.66 A STRUCTURE OF A-DUPLEX WITH BULGED ADENOSINE, SPERMINE FORM

Tereshko, V., Wallace, S., Usman, N., Wincott, F., Egli, M.

(2001) RNA 7: 405-420

Released	2001-04-21
Method	X-RAY DIFFRACTION 1.66 Å
Macromolecule	DNA/RNA (5'-R(GPCPG)-D(PAPTPAPT)-R(PAPCPGP*U)-3') (hybrid)
Unique Ligands	SPM

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1IG1 \| pdb_00001ig1	Download File View File

1.8A X-Ray structure of ternary complex of a catalytic domain of death-associated protein kinase with ATP analogue and Mn.

Tereshko, V., Teplova, M., Brunzelle, J., Watterson, D.M., Egli, M.

(2001) Nat Struct Biol 8: 899-907

Released	2002-04-01
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	death-associated protein kinase (protein)
Unique Ligands	ANP, MN

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1JKK \| pdb_00001jkk	Download File View File

2.4A X-RAY STRUCTURE OF TERNARY COMPLEX OF A CATALYTIC DOMAIN OF DEATH-ASSOCIATED PROTEIN KINASE WITH ATP ANALOGUE AND MG.

Tereshko, V., Teplova, M., Brunzelle, J., Watterson, D.M., Egli, M.

(2001) Nat Struct Biol 8: 899-907

Released	2002-04-01
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	DEATH-ASSOCIATED PROTEIN KINASE (protein)
Unique Ligands	ANP, MG

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1JKL \| pdb_00001jkl	Download File View File

1.6A X-RAY STRUCTURE OF BINARY COMPLEX OF A CATALYTIC DOMAIN OF DEATH-ASSOCIATED PROTEIN KINASE WITH ATP ANALOGUE

Tereshko, V., Teplova, M., Brunzelle, J., Watterson, D.M., Egli, M.

(2001) Nat Struct Biol 8: 899-907

Released	2002-04-01
Method	X-RAY DIFFRACTION 1.62 Å
Organisms	Homo sapiens
Macromolecule	DEATH-ASSOCIATED PROTEIN KINASE (protein)
Unique Ligands	ANP

1 to 25 of 120 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1CS7 | pdb_00001cs7

1D8Y | pdb_00001d8y

1D9D | pdb_00001d9d

1D9F | pdb_00001d9f

1D9H | pdb_00001d9h

1DPL | pdb_00001dpl

1DPN | pdb_00001dpn

1EH4 | pdb_00001eh4

1G6D | pdb_00001g6d

1HRU | pdb_00001hru

1I0F | pdb_00001i0f

1I0G | pdb_00001i0g

1I0J | pdb_00001i0j

1I0K | pdb_00001i0k

1I0M | pdb_00001i0m

1I0N | pdb_00001i0n

1I0O | pdb_00001i0o

1I0P | pdb_00001i0p

1I0Q | pdb_00001i0q

1I0T | pdb_00001i0t

1I2X | pdb_00001i2x

1I2Y | pdb_00001i2y

1IG1 | pdb_00001ig1

1JKK | pdb_00001jkk

1JKL | pdb_00001jkl