RCSB PDB: Search

16PK \| pdb_000016pk	Download File View File

PHOSPHOGLYCERATE KINASE FROM TRYPANOSOMA BRUCEI BISUBSTRATE ANALOG

Bernstein, B.E., Bressi, J., Blackburn, M., Gelb, M., Hol, W.G.J.

(1998) J Mol Biology 279: 1137-1148

Released	1998-11-25
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Trypanosoma brucei
Macromolecule	3-PHOSPHOGLYCERATE KINASE (protein)
Unique Ligands	BIS, EPE

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1EMH \| pdb_00001emh	Download File View File

CRYSTAL STRUCTURE OF HUMAN URACIL-DNA GLYCOSYLASE BOUND TO UNCLEAVED SUBSTRATE-CONTAINING DNA

Parikh, S.S., Slupphaug, G., Krokan, H.E., Blackburn, G.M., Tainer, J.A.

(2000) Proc Natl Acad Sci U S A 97: 5083-5088

Released	2000-05-16
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	URACIL-DNA GLYCOSYLASE (protein) DNA (5'-D(APAPAPGPAPTPAPAPCPA)-3') (nucleic acid) DNA (5'-D(TPGPTP(P2U)PAPTPCPTP*T)-3') (nucleic acid)

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1EMJ \| pdb_00001emj	Download File View File

URACIL-DNA GLYCOSYLASE BOUND TO DNA CONTAINING A 4'-THIO-2'DEOXYURIDINE ANALOG PRODUCT

Parikh, S.S., Walcher, G., Jones, G.D., Slupphaug, G., Krokan, H.E., Blackburn, G.M., Tainer, J.A.

(2000) Proc Natl Acad Sci U S A 97: 5083-5088

Released	2000-05-16
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	URACIL-DNA GLYCOSYLASE (protein) DNA (5'-D(APAPAPGPAPTPAPAPCPA)-3') (nucleic acid) DNA (5'-D(TPGPTP(ASU)PAPTPCPTP*T)-3') (nucleic acid)
Unique Ligands	URA

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1EMS \| pdb_00001ems	Download File View File

CRYSTAL STRUCTURE OF THE C. ELEGANS NITFHIT PROTEIN

Pace, H.C., Hodawadekar, S.C., Draganescu, A., Huang, J., Bieganowski, P., Pekarsky, Y., Croce, C.M., Brenner, C.

(2000) Curr Biol 10: 907-917

Released	2000-07-20
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Caenorhabditis elegans
Macromolecule	NIT-FRAGILE HISTIDINE TRIAD FUSION PROTEIN (protein)
Unique Ligands	EMC, MPD, NA

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1F3Y \| pdb_00001f3y	Download File View File

SOLUTION STRUCTURE OF THE NUDIX ENZYME DIADENOSINE TETRAPHOSPHATE HYDROLASE FROM LUPINUS ANGUSTIFOLIUS L.

Swarbrick, J.D., Bashtannyk, T., Maksel, D., Zhang, X.R., Blackburn, G.M., Gayler, K.R., Gooley, P.R.

(2000) J Mol Biology 302: 1165-1177

Released	2001-06-06
Method	SOLUTION NMR
Organisms	Lupinus angustifolius
Macromolecule	DIADENOSINE 5',5'''-P1,P4-TETRAPHOSPHATE HYDROLASE (protein)

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1FHI \| pdb_00001fhi	Download File View File

SUBSTRATE ANALOG (IB2) COMPLEX WITH THE FRAGILE HISTIDINE TRIAD PROTEIN, FHIT

Pace, H.C., Garrison, P.N., Barnes, L.D., Draganescu, A., Rosler, A., Blackburn, G.M., Siprashvili, Z., Croce, C.M., Huebner, K., Brenner, C.

(1998) Proc Natl Acad Sci U S A 95: 5484-5489

Released	1998-06-17
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens
Macromolecule	FRAGILE HISTIDINE TRIAD PROTEIN (protein)
Unique Ligands	IB2

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1H3I \| pdb_00001h3i	Download File View File

Crystal structure of the Histone Methyltransferase SET7/9

Wilson, J.R., Jing, C., Walker, P.A., Martin, S.R., Howell, S.A., Blackburn, G.M., Gamblin, S.J., Xiao, B.

(2002) Cell 111: 105

Released	2002-11-11
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	HISTONE H3 LYSINE 4 SPECIFIC METHYLTRANSFERASE (protein)
Unique Ligands	MG

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1J98 \| pdb_00001j98	Download File View File

The 1.2 Angstrom Structure of Bacillus subtilis LuxS

Ruzheinikov, S.N., Das, S.K., Sedelnikova, S.E., Hartley, A., Foster, S.J., Horsburgh, M.J., Cox, A.G., McCleod, C.W., Mekhalfia, A., Blackburn, G.M., Rice, D.W., Baker, P.J.

(2001) J Mol Biology 313: 111-122

Released	2001-06-06
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Bacillus subtilis
Macromolecule	AUTOINDUCER-2 PRODUCTION PROTEIN LUXS (protein)
Unique Ligands	ZN

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1JKN \| pdb_00001jkn	Download File View File

Solution Structure of the Nudix Enzyme Diadenosine Tetraphosphate Hydrolase from Lupinus angustifolius Complexed with ATP

Fletcher, J.I., Swarbrick, J.D., Maksel, D., Gayler, K.R., Gooley, P.R.

(2002) Structure 10: 205-213

Released	2002-02-27
Method	SOLUTION NMR
Organisms	Lupinus angustifolius
Macromolecule	diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase (protein)
Unique Ligands	ATP

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1JQW \| pdb_00001jqw	Download File View File

THE 2.3 ANGSTROM RESOLUTION STRUCTURE OF BACILLUS SUBTILIS LUXS/HOMOCYSTEINE COMPLEX

Ruzheinikov, S.N., Das, S.K., Sedelnikova, S.E., Hartley, A., Foster, S.J., Horsburgh, M.J., Cox, A.G., McCleod, C.W., Mekhalfia, A., Blackburn, G.M., Rice, D.W., Baker, P.J.

(2001) J Mol Biology 313: 111-122

Released	2001-10-24
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Bacillus subtilis
Macromolecule	Autoinducer-2 production protein luxS (protein)
Unique Ligands	HCS, ZN

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1JVI \| pdb_00001jvi	Download File View File

THE 2.2 ANGSTROM RESOLUTION STRUCTURE OF BACILLUS SUBTILIS LUXS/RIBOSILHOMOCYSTEINE COMPLEX

Ruzheinikov, S.N., Das, S.K., Sedelnikova, S.E., Hartley, A., Foster, S.J., Horsburgh, M.J., Cox, A.G., McCleod, C.W., Mekhalfia, A., Blackburn, G.M., Rice, D.W., Baker, P.J.

(2001) J Mol Biology 313: 111-122

Released	2001-10-24
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Bacillus subtilis
Macromolecule	Autoinducer-2 production protein luxS (protein)
Unique Ligands	HCS, RHC, SO4, ZN

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1KT9 \| pdb_00001kt9	Download File View File

Crystal Structure of C. elegans Ap4A Hydrolase

Bailey, S., Sedelnikova, S.E., Blackburn, G.M., Abdelghany, H.M., Baker, P.J., McLennan, A.G., Rafferty, J.B.

(2002) Structure 10: 589-600

Released	2002-05-08
Method	X-RAY DIFFRACTION 1.98 Å
Organisms	Caenorhabditis elegans
Macromolecule	Diadenosine Tetraphosphate Hydrolase (protein)

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1KTG \| pdb_00001ktg	Download File View File

Crystal Structure of a C. elegans Ap4A Hydrolase Binary Complex

Bailey, S., Sedelnikova, S.E., Blackburn, G.M., Abdelghany, H.M., Baker, P.J., McLennan, A.G., Rafferty, J.B.

(2002) Structure 10: 589-600

Released	2002-05-08
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Caenorhabditis elegans
Macromolecule	Diadenosine Tetraphosphate Hydrolase (protein)
Unique Ligands	AMP, MG, OH, PO4

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1MH5 \| pdb_00001mh5	Download File View File

The Structure Of The Complex Of The Fab Fragment Of The Esterolytic Antibody MS6-164 and A Transition-State Analog

Ruzheinikov, S.N., Muranova, T.A., Sedelnikova, S.E., Partridge, L.J., Blackburn, G.M., Murray, I.A., Kakinuma, H., Takashi, N., Shimazaki, K., Sun, J., Nishi, Y., Rice, D.W.

(2003) J Mol Biology 332: 423-435

Released	2003-09-23
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Mus musculus
Macromolecule	IMMUNOGLOBULIN MS6-164 (protein)
Unique Ligands	HAL, SO4

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1MIE \| pdb_00001mie	Download File View File

Crystal Structure Of The Fab Fragment of Esterolytic Antibody MS5-393

Ruzheinikov, S.N., Muranova, T.A., Sedelnikova, S.E., Partridge, L.J., Blackburn, G.M., Murray, I.A., Kakinuma, H., Takashi, N., Shimazaki, K., Sun, J., Nishi, Y., Rice, D.W.

(2003) J Mol Biology 332: 423-435

Released	2003-09-23
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Mus musculus
Macromolecule	IMMUNOGLOBULIN MS5-393 (protein)

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1MJ7 \| pdb_00001mj7	Download File View File

Crystal Structure Of The Complex Of The Fab fragment of Esterolytic Antibody MS5-393 and A Transition-State Analog

Ruzheinikov, S.N., Muranova, T.A., Sedelnikova, S.E., Partridge, L.J., Blackburn, G.M., Murray, I.A., Kakinuma, H., Takashi, N., Shimazaki, K., Sun, J., Nishi, Y., Rice, D.W.

(2003) J Mol Biology 332: 423-435

Released	2003-09-23
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Mus musculus
Macromolecule	IMMUNOGLOBULIN MS5-393 (protein)
Unique Ligands	HAL

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1MJ8 \| pdb_00001mj8	Download File View File

High Resolution Crystal Structure Of The Fab Fragment of The Esterolytic Antibody MS6-126

Ruzheinikov, S.N., Muranova, T.A., Sedelnikova, S.E., Partridge, L.J., Blackburn, G.M., Murray, I.A., Kakinuma, H., Takashi, N., Shimazaki, K., Sun, J., Nishi, Y., Rice, D.W.

(2003) J Mol Biology 332: 423-435

Released	2003-09-23
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Mus musculus
Macromolecule	IMMUNOGLOBULIN MS6-126 (protein)
Unique Ligands	GOL, PO4

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1MJJ \| pdb_00001mjj	Download File View File

HIGH RESOLUTION CRYSTAL STRUCTURE OF THE COMPLEX OF THE FAB FRAGMENT OF ESTEROLYTIC ANTIBODY MS6-12 AND A TRANSITION-STATE ANALOG

Ruzheinikov, S.N., Muranova, T.A., Sedelnikova, S.E., Partridge, L.J., Blackburn, G.M., Murray, I.A., Kakinuma, H., Takashi, N., Shimazaki, K., Sun, J., Nishi, Y., Rice, D.W.

(2003) J Mol Biology 332: 423-435

Released	2003-09-23
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Mus musculus
Macromolecule	IMMUNOGLOBULIN MS6-12 (protein)
Unique Ligands	HAL, SO4

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1MJU \| pdb_00001mju	Download File View File

1.22 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF THE FAB FRAGMENT OF ESTEROLYTIC ANTIBODY MS6-12

Ruzheinikov, S.N., Muranova, T.A., Sedelnikova, S.E., Partridge, L.J., Blackburn, G.M., Murray, I.A., Kakinuma, H., Takashi, N., Shimazaki, K., Sun, J., Nishi, Y., Rice, D.W.

(2003) J Mol Biology 332: 423-435

Released	2003-09-23
Method	X-RAY DIFFRACTION 1.22 Å
Organisms	Mus musculus
Macromolecule	IMMUNOGLOBULIN MS6-12 (protein)
Unique Ligands	GOL

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1O9S \| pdb_00001o9s	Download File View File

Crystal structure of a ternary complex of the human histone methyltransferase SET7/9

Xiao, B., Jing, C., Wilson, J.R., Walker, P.A., Vasisht, N., Kelly, G., Howell, S., Taylor, I.A., Blackburn, G.M., Gamblin, S.J.

(2003) Nature 421: 652

Released	2003-02-06
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Homo sapiens
Macromolecule	GENE FRAGMENT FOR HISTONE H3 (protein) HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-4 SPECIFIC (protein)
Unique Ligands	SAH

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1RZY \| pdb_00001rzy	Download File View File

Crystal structure of rabbit Hint complexed with N-ethylsulfamoyladenosine

Krakowiak, A.K., Pace, H.C., Blackburn, G.M., Adams, M., Mekhalfia, A., Kaczmarek, R., Baraniak, J., Stec, W.J., Brenner, C.

(2004) J Biological Chem 279: 18711-18716

Released	2004-03-09
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Oryctolagus cuniculus
Macromolecule	Histidine triad nucleotide-binding protein 1 (protein)
Unique Ligands	5AS

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1X7N \| pdb_00001x7n	Download File View File

The crystal structure of Pyrococcus furiosus phosphoglucose isomerase with bound 5-phospho-D-arabinonate and Manganese

Berrisford, J.M., Akerboom, J., Brouns, S., Sedelnikova, S.E., Turnbull, A.P., van der Oost, J., Salmon, L., Hardre, R., Murray, I.A., Blackburn, G.M., Rice, D.W., Baker, P.J.

(2004) J Mol Biology 343: 649-657

Released	2004-10-12
Method	X-RAY DIFFRACTION 1.89 Å
Organisms	Pyrococcus furiosus
Macromolecule	Glucose-6-phosphate isomerase (protein)
Unique Ligands	MN, PA5

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1X82 \| pdb_00001x82	Download File View File

CRYSTAL STRUCTURE OF PHOSPHOGLUCOSE ISOMERASE FROM PYROCOCCUS FURIOSUS WITH BOUND 5-phospho-D-arabinonate

Berrisford, J.M., Akerboom, J., Brouns, S., Sedelnikova, S.E., Turnbull, A.P., van der Oost, J., Salmon, L., Hardre, R., Murray, I.A., Blackburn, G.M., Rice, D.W., Baker, P.J.

(2004) J Mol Biology 343: 649-657

Released	2004-10-12
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Pyrococcus furiosus
Macromolecule	Glucose-6-phosphate isomerase (protein)
Unique Ligands	PA5

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1X8E \| pdb_00001x8e	Download File View File

Crystal structure of Pyrococcus furiosus phosphoglucose isomerase free enzyme

Berrisford, J.M., Akerboom, J., Brouns, S., Sedelnikova, S.E., Turnbull, A.P., van der Oost, J., Salmon, L., Hardre, R., Murray, I.A., Blackburn, G.M., Rice, D.W., Baker, P.J.

(2004) J Mol Biology 343: 649-657

Released	2004-10-12
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Pyrococcus furiosus
Macromolecule	Glucose-6-phosphate isomerase (protein)

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2AIO \| pdb_00002aio	Download File View File

Metallo beta lactamase L1 from Stenotrophomonas maltophilia complexed with hydrolyzed moxalactam

Spencer, J., Read, J., Sessions, R.B., Howell, S., Blackburn, G.M., Gamblin, S.J.

(2005) J Am Chem Soc 127: 14439-14444

Released	2005-10-11
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Stenotrophomonas maltophilia
Macromolecule	Metallo-beta-lactamase L1 (protein)
Unique Ligands	MX1, SO4, ZN

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

16PK | pdb_000016pk

1EMH | pdb_00001emh

1EMJ | pdb_00001emj

1EMS | pdb_00001ems

1F3Y | pdb_00001f3y

1FHI | pdb_00001fhi

1H3I | pdb_00001h3i

1J98 | pdb_00001j98

1JKN | pdb_00001jkn

1JQW | pdb_00001jqw

1JVI | pdb_00001jvi

1KT9 | pdb_00001kt9

1KTG | pdb_00001ktg

1MH5 | pdb_00001mh5

1MIE | pdb_00001mie

1MJ7 | pdb_00001mj7

1MJ8 | pdb_00001mj8

1MJJ | pdb_00001mjj

1MJU | pdb_00001mju

1O9S | pdb_00001o9s

1RZY | pdb_00001rzy

1X7N | pdb_00001x7n

1X82 | pdb_00001x82

1X8E | pdb_00001x8e

2AIO | pdb_00002aio