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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Chanda, S."

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Search Summary

This query matches 68 Structures.

Refinements

Structure Determination Methodology

experimental (68)

Scientific Name of Source Organism

	Homo sapiens (27)
	Pseudomonas aeruginosa (7)
	Caenorhabditis elegans (4)
	Bos taurus (3)
	Escherichia coli K-12 (3)
	Bacillus cereus ATCC 10987 (2)
	Murine norovirus 1 (2)
	Mus musculus (2)
	Mycolicibacterium thermoresistibile (2)
	Pyricularia oryzae 70-15 (2)

More...

Taxonomy

	Eukaryota (42)
	Bacteria (20)
	Riboviria (6)
	Duplodnaviria (1)
	other sequences (1)

Experimental Method

	X-RAY DIFFRACTION (59)
	ELECTRON MICROSCOPY (6)
	SOLUTION NMR (3)

Polymer Entity Type

	Protein (68)
	RNA (2)

Refinement Resolution (Å)

	1.0 - 1.5 (6)
	1.5 - 2.0 (24)
	2.0 - 2.5 (12)
	2.5 - 3.0 (14)
	3.0 - 3.5 (7)
	3.5 - 4.0 (1)
	4.0 - 4.5 (1)

Release Date

	2000 - 2004 (1)
	2005 - 2009 (3)
	2010 - 2014 (14)
	2015 - 2019 (26)
	2020 - 2024 (24)

Enzyme Classification Name

	Hydrolases (19)
	Transferases (11)
	Lyases (4)
	Oxidoreductases (3)

Membrane Protein Annotation

	MemProtMD (7)
	PDBTM (7)
	OPM (5)
	mpstruc (3)

Symmetry Type

	Asymmetric (32)
	Cyclic (30)
	Dihedral (6)
	Helical (1)
	Icosahedral (1)

SCOP Classification

	Alpha and beta proteins (a/b) (11)
	Small proteins (3)
	All beta proteins (5)
	Artifacts (4)
	Multi-domain proteins (alpha and beta) (4)
	Coiled coil proteins (2)
	Alpha and beta proteins (a+b) (2)
	Peptides (1)

AllSelected

1 to 25 of 68 Structures

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1OT0 \| pdb_00001ot0	Download File View File

Structure of Antimicrobial Peptide, HP (2-20) and its Analogues Derived from Helicobacter pylori, as Determined by 1H NMR Spectroscopy

Lee, K.H., Lee, D.G., Park, Y., Hahm, K.-S., Kim, Y.

To be published

Released	2004-09-07
Method	SOLUTION NMR
Organisms	Helicobacter pylori
Macromolecule	50S ribosomal protein L1 (protein)

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2J7Z \| pdb_00002j7z	Download File View File

Crystal Structure of recombinant Human Stromal Cell-Derived Factor- 1alpha

Ryu, E.K., Kim, T.G., Kwon, T.H., Jung, I.D., Ryu, D.W., Park, Y.-M., Ahn, K., Ban, C.

(2007) Proteins 67: 1193

Released	2006-10-23
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Homo sapiens
Macromolecule	STROMAL CELL-DERIVED FACTOR 1 ALPHA (protein)

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2MUK \| pdb_00002muk	Download File View File

1H, 13C, and 15N Chemical Shift Assignments for AUX/IAA17

Suh, J., Han, M.

(2014) Proc Natl Acad Sci U S A 111: 18613-18618

Released	2014-12-17
Method	SOLUTION NMR
Organisms	Arabidopsis thaliana
Macromolecule	Auxin-responsive protein IAA17 (protein)

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2N40 \| pdb_00002n40	Download File View File

Solution structure of the link module of human tsg-6 in presence of a chondroitin 4-sulfate hexasaccharide

Park, Y., Prestegard, J.H.

(2016) Biochemistry 55: 262-276

Released	2016-01-13
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Tumor necrosis factor-inducible gene 6 protein (protein)

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2WZX \| pdb_00002wzx	Download File View File

AMP-C BETA-LACTAMASE (PSEUDOMONAS AERUGINOSA)IN COMPLEX WITH compound M-02

Fitzgerald, P.M.D., Sharma, N., Lu, J.

(2010) Bioorg Med Chem Lett 20: 918

Released	2010-01-12
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	BETA-LACTAMASE (protein)
Unique Ligands	CL, ZX0

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2WZZ \| pdb_00002wzz	Download File View File

AMP-C BETA-LACTAMASE (PSEUDOMONAS AERUGINOSA)IN COMPLEX WITH compound M-03

Fitzgerald, P.M.D., Sharma, N., Lu, J.

(2010) Bioorg Med Chem Lett 20: 918

Released	2010-01-12
Method	X-RAY DIFFRACTION 1.57 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	BETA-LACTAMASE (protein)
Unique Ligands	CL, ZX1

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3DUL \| pdb_00003dul	Download File View File

Crystal Structure Analysis of the O-methyltransferase from Bacillus cereus

Cho, J.-H., Rhee, S.

(2008) J Mol Biology 382: 987-997

Released	2008-08-05
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Bacillus cereus ATCC 10987
Macromolecule	O-methyltransferase, putative (protein)

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3DUW \| pdb_00003duw	Download File View File

Crystal Structural Analysis of the O-methyltransferase from Bacillus cereus in complex SAH

Cho, J.-H., Rhee, S.

(2008) J Mol Biology 382: 987-997

Released	2008-08-05
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Bacillus cereus ATCC 10987
Macromolecule	O-methyltransferase, putative (protein)
Unique Ligands	SAH

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3LDI \| pdb_00003ldi	Download File View File

Crystal structure of aprotinin in complex with sucrose octasulfate: unusual interactions and implication for heparin binding

Yang, I.S., Kim, T.G., Park, B.S., Kim, K.H.

(2010) Biochem Biophys Res Commun 397: 429-435

Released	2010-06-23
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Bos taurus
Macromolecule	Pancreatic trypsin inhibitor (protein)
Unique Ligands	GOL, HG, SO4

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3LDJ \| pdb_00003ldj	Download File View File

Crystal structure of aprotinin in complex with sucrose octasulfate: unusual interactions and implication for heparin binding

Yang, I.S., Kim, T.G., Park, B.S., Kim, K.H.

(2010) Biochem Biophys Res Commun

Released	2010-09-15
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Bos taurus
Macromolecule	Pancreatic trypsin inhibitor (protein)
Unique Ligands	ACT
Unique branched monosaccharides	GU4, YYJ

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3LDM \| pdb_00003ldm	Download File View File

Crystal structure of aprotinin in complex with sucrose octasulfate: unusual interactions and implication for heparin binding

Yang, I.S., Kim, T.G., Park, B.S., Kim, K.H.

(2010) Biochem Biophys Res Commun

Released	2010-06-23
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Bos taurus
Macromolecule	Pancreatic trypsin inhibitor (protein)

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3NAH \| pdb_00003nah	Download File View File

Crystal structures and functional analysis of murine norovirus RNA-dependent RNA polymerase

Kim, K.H., Lee, J.H., Alam, I., Park, Y., Kang, S.

To be published

Released	2011-06-08
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Murine norovirus 1
Macromolecule	RNA dependent RNA polymerase (protein)
Unique Ligands	SO4

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3NAI \| pdb_00003nai	Download File View File

Crystal structures and functional analysis of murine norovirus RNA-dependent RNA polymerase

Kim, K.H., Lee, J.H., Alam, I., Park, Y., Kang, S.

To be published

Released	2011-06-08
Method	X-RAY DIFFRACTION 2.56 Å
Organisms	Murine norovirus 1
Macromolecule	RNA dependent RNA polymerase (protein)
Unique Ligands	GOL, MG, MN3, SO4, URF

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3ZHD \| pdb_00003zhd	Download File View File

The crystal structure of single domain antibody 8-4 scaffold.

Song, H.-N., Woo, E.-J., Lim, H.-K.

(2014) PLoS One 9: 98178

Released	2014-01-08
Method	X-RAY DIFFRACTION 1.962 Å
Organisms	Homo sapiens
Macromolecule	MG8-4 SCAFFOLD ANTIBODY (protein)
Unique Ligands	SO4

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3ZHK \| pdb_00003zhk	Download File View File

The crystal structure of single domain antibody 2x1 scaffold

Song, H.-N., Woo, E.-J., Lim, H.-K.

(2014) PLoS One 9: 98178

Released	2014-01-08
Method	X-RAY DIFFRACTION 1.962 Å
Organisms	Homo sapiens
Macromolecule	MG2X1 SCAFFOLD ANTIBODY (protein)
Unique Ligands	SO4

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3ZHL \| pdb_00003zhl	Download File View File

The crystal structure of single domain antibody 8-14 scaffold

Song, H.-N., Woo, E.-J., Lim, H.-K.

(2014) PLoS One 9: 98178

Released	2014-01-08
Method	X-RAY DIFFRACTION 2.47 Å
Organisms	Homo sapiens
Macromolecule	MG8-14 SCAFFOLD ANTIBODY (protein)
Unique Ligands	GOL

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4EDA \| pdb_00004eda	Download File View File

Structures of monomeric hemagglutinin and its complex with an Fab fragment of a neutralizing antibody that binds to H1 subtype influenza viruses: molecular basis of infectivity of 2009 pandemic H1N1 influenza A viruses

Kim, K.H., Cho, K.J., Lee, J.H., Park, Y.H., Khan, T.G., Lee, J.Y., Kang, S.H., Alam, I.

(2013) J Gen Virol 94: 1712-1722

Released	2013-05-22
Method	X-RAY DIFFRACTION 2.701 Å
Organisms	Influenza A virus (A/Korea/01/2009(H1N1))
Macromolecule	Hemagglutinin (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG