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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Duignan, D.B."

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Search Summary

This query matches 12 Structures.

Refinements

Structure Determination Methodology

experimental (12)

Scientific Name of Source Organism

Homo sapiens (12)

Taxonomy

Eukaryota (12)

Experimental Method

X-RAY DIFFRACTION (12)

Polymer Entity Type

Protein (12)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (1)
	2.0 - 2.5 (1)
	2.5 - 3.0 (9)

Release Date

	2010 - 2014 (4)
	2015 - 2019 (1)
	2020 - 2024 (7)

Enzyme Classification Name

Transferases (5)

Symmetry Type

	Cyclic (6)
	Asymmetric (6)

SCOP Classification

	All beta proteins (5)
	Alpha and beta proteins (a+b) (5)
	Artifacts (3)

AllSelected

1 to 12 of 12 Structures

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4Q9S \| pdb_00004q9s	Download File View File

Crystal Structure of human Focal Adhesion Kinase (Fak) bound to Compound1 (3,5-DIHYDRO[1,2,4]TRIAZINO[3,4-C][1,4]BENZOXAZIN-2(1H)-ONE)

Argiriadi, M.A., George, D.M.

(2015) J Med Chem 58: 222-236

Released	2014-07-02
Method	X-RAY DIFFRACTION 2.07 Å
Organisms	Homo sapiens
Macromolecule	Focal adhesion kinase 1 (protein)
Unique Ligands	30G

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4Q9Z \| pdb_00004q9z	Download File View File

Human Protein Kinase C Theta in Complex with Compound35 ((1R)-9-(AZETIDIN-3-YLAMINO)-1,8-DIMETHYL-3,5-DIHYDRO[1,2,4]TRIAZINO[3,4-C][1,4]BENZOXAZIN-2(1H)-ONE)

Argiriadi, M.A., George, D.M.

(2015) J Med Chem 58: 222-236

Released	2014-07-02
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	HUMAN PROTEIN KINASE C THETA (protein)
Unique Ligands	NA, PZW

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4RA4 \| pdb_00004ra4	Download File View File

Crystal Structure of Human Protein Kinase C Alpha in Complex with Compound 28 ((R)-6-((3S,4S)-1,3-Dimethyl-piperidin-4-yl)-7-(2-fluoro-phenyl)-4-methyl-2,10-dihydro-9-oxa-1,2,4a-triaza-phenanthren-3-one)

Argiriadi, M.A., George, D.M.

(2015) J Med Chem 58: 333-346

Released	2014-10-08
Method	X-RAY DIFFRACTION 2.63 Å
Organisms	Homo sapiens
Macromolecule	Protein kinase C (protein)
Unique Ligands	3KZ

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4RA5 \| pdb_00004ra5	Download File View File

Human Protein Kinase C THETA IN COMPLEX WITH LIGAND COMPOUND 11a (6-[(1,3-Dimethyl-azetidin-3-yl)-methyl-amino]-4(R)-methyl-7-phenyl-2,10-dihydro-9-oxa-1,2,4a-triaza-phenanthren-3-one)

Argiriadi, M.A., George, D.M.

(2015) J Med Chem 58: 333-346

Released	2014-10-08
Method	X-RAY DIFFRACTION 2.61 Å
Organisms	Homo sapiens
Macromolecule	HUMAN PROTEIN KINASE C THETA (protein)
Unique Ligands	3L0, EDO, NA

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5T68 \| pdb_00005t68	Download File View File

Crystal structure of Syk catalytic domain in complex with a furo[3,2-d]pyrimidine

Argiriadi, M.A., Hoemann, M., Wilson, N., Banach, D., Burchat, A., Calderwood, D., Clapham, B., Cox, P., Duignan, D.B., Konopacki, D., Somal, G., Vasudevan, A.

(2016) Bioorg Med Chem Lett 26: 5562-5567

Released	2016-10-26
Method	X-RAY DIFFRACTION 2.93 Å
Organisms	Homo sapiens
Macromolecule	Tyrosine-protein kinase SYK (protein)
Unique Ligands	77V

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6X81 \| pdb_00006x81	Download File View File

Crystal Structure of TNFalpha with isoquinoline compound 2

Longenecker, K.L., Stoll, V.S.

(2021) J Med Chem 64: 417-429

Released	2021-01-13
Method	X-RAY DIFFRACTION 2.81 Å
Organisms	Homo sapiens
Macromolecule	Tumor necrosis factor (protein)
Unique Ligands	UTJ

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6X82 \| pdb_00006x82	Download File View File

Crystal Structure of TNFalpha with isoquinoline compound 4

Longenecker, K.L., Stoll, V.S.

(2021) J Med Chem 64: 417-429

Released	2021-01-13
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Homo sapiens
Macromolecule	Tumor necrosis factor (protein)
Unique Ligands	UTM

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6X83 \| pdb_00006x83	Download File View File

Crystal Structure of TNFalpha with fragment compound 6

Longenecker, K.L., Stoll, V.S.

(2021) J Med Chem 64: 417-429

Released	2021-01-13
Method	X-RAY DIFFRACTION 2.83 Å
Organisms	Homo sapiens
Macromolecule	Tumor necrosis factor (protein)
Unique Ligands	UTS

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6X85 \| pdb_00006x85	Download File View File

Crystal Structure of TNFalpha with indolinone compound 9

Longenecker, K.L., Stoll, V.S.

(2021) J Med Chem 64: 417-429

Released	2021-01-13
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Homo sapiens
Macromolecule	Tumor necrosis factor (protein)
Unique Ligands	UTV

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6X86 \| pdb_00006x86	Download File View File

Crystal Structure of TNFalpha with indolinone compound 11

Longenecker, K.L., Stoll, V.S.

(2021) J Med Chem 64: 417-429

Released	2021-01-13
Method	X-RAY DIFFRACTION 2.93 Å
Organisms	Homo sapiens
Macromolecule	Tumor necrosis factor (protein)
Unique Ligands	UTY

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8USR \| pdb_00008usr	Download File View File

IL17A homodimer complexed to Compound 23

Argiriadi, M.A., Ramos, A.L.

(2024) J Med Chem 67: 6456-6494

Released	2024-04-03
Method	X-RAY DIFFRACTION 1.83 Å
Organisms	Homo sapiens
Macromolecule	Interleukin-17A (protein)
Unique Ligands	XCE

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8USS \| pdb_00008uss	Download File View File

IL17A complexed to Compound 7

Argiriadi, M.A., Ramos, A.L.

(2024) J Med Chem 67: 6456-6494

Released	2024-04-03
Method	X-RAY DIFFRACTION 1.47 Å
Organisms	Homo sapiens
Macromolecule	Interleukin-17A (protein)
Unique Ligands	CL, XCW

1 to 12 of 12 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

4Q9S | pdb_00004q9s

Crystal Structure of human Focal Adhesion Kinase (Fak) bound to Compound1 (3,5-DIHYDRO[1,2,4]TRIAZINO[3,4-C][1,4]BENZOXAZIN-2(1H)-ONE)

4Q9Z | pdb_00004q9z

Human Protein Kinase C Theta in Complex with Compound35 ((1R)-9-(AZETIDIN-3-YLAMINO)-1,8-DIMETHYL-3,5-DIHYDRO[1,2,4]TRIAZINO[3,4-C][1,4]BENZOXAZIN-2(1H)-ONE)

4RA4 | pdb_00004ra4

Crystal Structure of Human Protein Kinase C Alpha in Complex with Compound 28 ((R)-6-((3S,4S)-1,3-Dimethyl-piperidin-4-yl)-7-(2-fluoro-phenyl)-4-methyl-2,10-dihydro-9-oxa-1,2,4a-triaza-phenanthren-3-one)

4RA5 | pdb_00004ra5

Human Protein Kinase C THETA IN COMPLEX WITH LIGAND COMPOUND 11a (6-[(1,3-Dimethyl-azetidin-3-yl)-methyl-amino]-4(R)-methyl-7-phenyl-2,10-dihydro-9-oxa-1,2,4a-triaza-phenanthren-3-one)

5T68 | pdb_00005t68

Crystal structure of Syk catalytic domain in complex with a furo[3,2-d]pyrimidine

6X81 | pdb_00006x81

Crystal Structure of TNFalpha with isoquinoline compound 2

6X82 | pdb_00006x82

Crystal Structure of TNFalpha with isoquinoline compound 4

6X83 | pdb_00006x83

Crystal Structure of TNFalpha with fragment compound 6

6X85 | pdb_00006x85

Crystal Structure of TNFalpha with indolinone compound 9

6X86 | pdb_00006x86

Crystal Structure of TNFalpha with indolinone compound 11

8USR | pdb_00008usr

IL17A homodimer complexed to Compound 23

8USS | pdb_00008uss

IL17A complexed to Compound 7

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

4Q9S | pdb_00004q9s

4Q9Z | pdb_00004q9z

4RA4 | pdb_00004ra4

4RA5 | pdb_00004ra5

5T68 | pdb_00005t68

6X81 | pdb_00006x81

6X82 | pdb_00006x82

6X83 | pdb_00006x83

6X85 | pdb_00006x85

6X86 | pdb_00006x86

8USR | pdb_00008usr

8USS | pdb_00008uss