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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Fry, E.H."

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Search Summary

This query matches 22 Structures.

Refinements

Structure Determination Methodology

experimental (22)

Scientific Name of Source Organism

	Homo sapiens (15)
	Rattus norvegicus (4)
	Mus musculus (3)
	Streptococcus pneumoniae R6 (2)

Taxonomy

	Eukaryota (20)
	Eukaryota (eukaryotes) (3)
	Bacteria (2)

Experimental Method

X-RAY DIFFRACTION (22)

Polymer Entity Type

Protein (22)

Refinement Resolution (Å)

	2.0 - 2.5 (5)
	2.5 - 3.0 (8)
	3.0 - 3.5 (6)
	3.5 - 4.0 (3)

Release Date

	2005 - 2009 (17)
	2010 - 2014 (5)

Enzyme Classification Name

	Transferases (9)
	Hydrolases (10)
	Ligases (2)

Symmetry Type

	Asymmetric (12)
	Cyclic (14)
	Dihedral (7)

SCOP Classification

	All beta proteins (7)
	Alpha and beta proteins (a/b) (6)
	Multi-domain proteins (alpha and beta) (2)
	Alpha and beta proteins (a+b) (4)
	All alpha proteins (2)

AllSelected

1 to 22 of 22 Structures

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2AM1 \| pdb_00002am1	Download File View File

sp protein ligand 1

Longenecker, K.L., Stamper, G.F., Hajduk, P.J., Fry, E.H., Jakob, C.G., Harlan, J.E., Edalji, R., Bartley, D.M., Walter, K.A., Solomon, L.R.

(2005) Protein Sci 14: 3039-3047

Released	2006-01-24
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Streptococcus pneumoniae R6
Macromolecule	UDP-N-acetylmuramoylalanine-D-glutamyl-lysine-D-alanyl-D-alanine ligase, MurF protein (protein)
Unique Ligands	1LG, GOL

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2AM2 \| pdb_00002am2	Download File View File

sp protein ligand 2

Longenecker, K.L., Stamper, G.F., Hajduk, P.J., Fry, E.H., Jakob, C.G., Harlan, J.E., Edalji, R., Bartley, D.M., Walter, K.A., Solomon, L.R.

(2005) Protein Sci 14: 3039-3047

Released	2006-01-24
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Streptococcus pneumoniae R6
Macromolecule	UDP-N-acetylmuramoylalanine-D-glutamyl-lysine-D-alanyl-D-alanine ligase, MurF protein (protein)
Unique Ligands	2LG

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2FHY \| pdb_00002fhy	Download File View File

Structure of human liver FPBase complexed with a novel benzoxazole as allosteric inhibitor

Abad-Zapatero, C.

(2006) Bioorg Med Chem Lett 16: 1811-1815

Released	2006-02-21
Method	X-RAY DIFFRACTION 2.95 Å
Organisms	Homo sapiens
Macromolecule	Fructose-1,6-bisphosphatase 1 (protein)
Unique Ligands	A37, MG

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2FIE \| pdb_00002fie	Download File View File

Structure of human liver FBPase complexed with potent benzoxazole allosteric inhibitors

Abad-Zapatero, C.

(2006) Bioorg Med Chem Lett 16: 1807-1810

Released	2006-02-21
Method	X-RAY DIFFRACTION 2.81 Å
Organisms	Homo sapiens
Macromolecule	Fructose-1,6-bisphosphatase 1 (protein)
Unique Ligands	A74

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2FIX \| pdb_00002fix	Download File View File

Structure of human liver FBPase complexed with potent benzoxazole allosteric inhibitiors

Abad-Zapatero, C.

(2006) Bioorg Med Chem Lett 16: 1807-1810

Released	2006-02-21
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Homo sapiens
Macromolecule	Fructose-1,6-bisphosphatase 1 (protein)
Unique Ligands	870

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2G01 \| pdb_00002g01	Download File View File

Pyrazoloquinolones as Novel, Selective JNK1 inhibitors

Abad-Zapatero, C.

(2006) Bioorg Med Chem Lett 16: 2590-2594

Released	2006-04-18
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Homo sapiens
Macromolecule	C-jun-amino-terminal kinase-interacting protein 1 (protein) Mitogen-activated protein kinase 8 (protein)
Unique Ligands	73Q, SO4

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2G5P \| pdb_00002g5p	Download File View File

Crystal structure of human dipeptidyl peptidase IV (DPPIV) complexed with cyanopyrrolidine (C5-pro-pro) inhibitor 21ac

Longenecker, K.L., Fry, E.H., Lake, M.R., Solomon, L.R., Pei, Z., Li, X.

(2006) J Med Chem 49: 3520-3535

Released	2006-07-04
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Dipeptidyl peptidase 4 (protein)
Unique Ligands	ADF

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2G5T \| pdb_00002g5t	Download File View File

Crystal structure of human dipeptidyl peptidase IV (DPPIV) complexed with cyanopyrrolidine (C5-pro-pro) inhibitor 21ag

Longenecker, K.L., Fry, E.H., Lake, M.R., Solomon, L.R., Pei, Z., Li, X.

(2006) J Med Chem 49: 3520-3535

Released	2006-07-04
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Dipeptidyl peptidase 4 (protein)
Unique Ligands	ACF

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2G63 \| pdb_00002g63	Download File View File

Crystal structure of human dipeptidyl peptidase IV (DPPIV) complexed with cyanopyrrolidine (C5-pro-pro) inhibitor 24b

Longenecker, K.L., Fry, E.H., Lake, M.R., Solomon, L.R., Pei, Z., Li, X.

(2006) J Med Chem 49: 3520-3535

Released	2006-07-04
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Dipeptidyl peptidase 4 (protein)
Unique Ligands	AAF

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2GBC \| pdb_00002gbc	Download File View File

Native DPP-IV (CD26) from Rat

Longenecker, K.L., Jakob, C.G., Fry, E.H., Wilk, S.

(2006) Biochemistry 45: 7474-7482

Released	2006-07-04
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Rattus norvegicus
Macromolecule	Dipeptidyl peptidase 4 (protein)
Unique Ligands	NAG

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2GBF \| pdb_00002gbf	Download File View File

rat dpp-IV with alkynyl cyanopyrrolidine #1

Longenecker, K.L., Jakob, C.G., Fry, E.H., Wilk, S.

(2006) Biochemistry 45: 7474-7482

Released	2006-07-04
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Rattus norvegicus
Macromolecule	Dipeptidyl peptidase 4 (protein)
Unique Ligands	AIA

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2GBG \| pdb_00002gbg	Download File View File

rat DPP-IV with alkynyl cyanopyrrolidine #2

Longenecker, K.L., Jakob, C.G., Fry, E.H., Wilk, S.

(2006) Biochemistry 45: 7474-7482

Released	2006-07-04
Method	X-RAY DIFFRACTION 3 Å
Organisms	Rattus norvegicus
Macromolecule	Dipeptidyl peptidase 4 (protein)
Unique Ligands	1AD, SO4

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2GBI \| pdb_00002gbi	Download File View File

rat DPP-IV with xanthine inhibitor 4

Longenecker, K.L., Jakob, C.G., Fry, E.H., Wilk, S.

(2006) Biochemistry 45: 7474-7482

Released	2006-07-04
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Rattus norvegicus
Macromolecule	Dipeptidyl peptidase 4 (protein)
Unique Ligands	XIH

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2GMX \| pdb_00002gmx	Download File View File

Selective Aminopyridine-Based C-Jun N-terminal Kinase inhibitors with cellular activity

Abad-Zapatero, C.

(2006) J Med Chem 49: 3563-3580

Released	2006-06-06
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Homo sapiens
Macromolecule	C-jun-amino-terminal kinase-interacting protein 1 (protein) Mitogen-activated protein kinase 8 (protein)
Unique Ligands	877, SO4

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2H96 \| pdb_00002h96	Download File View File

Discovery of Potent, Highly Selective, and Orally Bioavailable Pyridine Carboxamide C-jun NH2-terminal Kinase Inhibitors

Abad-Zapatero, C.

(2006) J Med Chem 49: 4455-4458

Released	2006-07-25
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	C-jun-amino-terminal kinase-interacting protein 1 (protein) Mitogen-activated protein kinase 8 (protein)
Unique Ligands	893, GOL, SO4

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2NO3 \| pdb_00002no3	Download File View File

Novel 4-anilinopyrimidines as potent JNK1 Inhibitors

Abad-Zapatero, C.

(2007) Bioorg Med Chem Lett 17: 668-672

Released	2007-04-17
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	C-JUN-AMINO-TERMINAL KINASE-INTERACTING protein 1 (protein) Mitogen-activated protein kinase 8 (protein)
Unique Ligands	859, SO4

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3E8U \| pdb_00003e8u	Download File View File

Crystal structure and thermodynamic analysis of diagnostic Fab 106.3 complexed with BNP 5-13 (C10A) reveal basis of selective molecular recognition

Longenecker, K.L., Ruan, Q., Fry, E.H., Saldana, S.S., Brophy, S.E., Richardson, P.L., Tetin, S.Y.

(2009) Proteins 76: 536-547

Released	2009-07-07
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Mus musculus
Macromolecule	BNP peptide epitope (protein) Fab 106.3 heavy chain (protein) Fab 106.3 light chain (protein)

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3GJW \| pdb_00003gjw	Download File View File

PARP complexed with A968427

Park, C.H.

(2009) Bioorg Med Chem Lett 19: 4050-4054

Released	2010-03-09
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Poly [ADP-ribose] polymerase 1 (protein)
Unique Ligands	GJW

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3L3M \| pdb_00003l3m	Download File View File

PARP complexed with A927929

Park, C.H.

(2010) J Med Chem 53: 3142-3153

Released	2010-06-23
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	Poly [ADP-ribose] polymerase 1 (protein)
Unique Ligands	A92

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3NEW \| pdb_00003new	Download File View File

p38-alpha complexed with Compound 10

Goedken, E.R., Comess, K.M., Sun, C., Argiriadi, M., Jia, Y., Quinn, C.M., Banach, D.L., Marcotte, D., Borhani, D.

(2011) ACS Chem Biol 6: 234-244

Released	2010-12-01
Method	X-RAY DIFFRACTION 2.51 Å
Organisms	Homo sapiens
Macromolecule	Mitogen-activated protein kinase 14 (protein)
Unique Ligands	3NE

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3O17 \| pdb_00003o17	Download File View File

Crystal Structure of JNK1-alpha1 isoform

Abad-Zapatero, C.

To be published

Released	2011-01-12
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	C-Jun-amino-terminal kinase-interacting protein 1, JIP1, 10MER PEPTIDE (protein) Mitogen-activated protein kinase 8 (protein)
Unique Ligands	SO4

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3O2M \| pdb_00003o2m	Download File View File

Crystal Structure of JNK1-alpha1 isoform complex with a biaryl tetrazol (A-82118)

Abad-Zapatero, C.

(2011) ACS Chem Biol 6: 234-244

Released	2011-01-12
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	C-Jun-amino-terminal kinase-interacting protein 1, JIP1, 10MER PEPTIDE (protein) Mitogen-activated protein kinase 8 (protein)
Unique Ligands	46A, SO4

1 to 22 of 22 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2AM1 | pdb_00002am1

2AM2 | pdb_00002am2

2FHY | pdb_00002fhy

2FIE | pdb_00002fie

2FIX | pdb_00002fix

2G01 | pdb_00002g01

2G5P | pdb_00002g5p

2G5T | pdb_00002g5t

2G63 | pdb_00002g63

2GBC | pdb_00002gbc

2GBF | pdb_00002gbf

2GBG | pdb_00002gbg

2GBI | pdb_00002gbi

2GMX | pdb_00002gmx

2H96 | pdb_00002h96

2NO3 | pdb_00002no3

3E8U | pdb_00003e8u

3GJW | pdb_00003gjw

3L3M | pdb_00003l3m

3NEW | pdb_00003new

3O17 | pdb_00003o17

3O2M | pdb_00003o2m