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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Jiang, C."

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Search Summary

This query matches 58 Structures.

Refinements

Structure Determination Methodology

experimental (58)

Scientific Name of Source Organism

	Homo sapiens (38)
	Human immunodeficiency virus 1 (10)
	Macaca mulatta (6)
	Severe acute respiratory syndrome coronavirus 2 (6)
	synthetic construct (6)
	Bacteroides thetaiotaomicron (3)
	Corynebacterium glutamicum ATCC 13032 (2)
	Mus musculus (2)
	Saccharomyces cerevisiae (2)
	Acidianus tengchongensis (1)

More...

Taxonomy

	Eukaryota (48)
	Riboviria (17)
	Bacteria (8)
	other sequences (6)
	Archaea (1)
	Eukaryota (eukaryotes) (1)

Experimental Method

	X-RAY DIFFRACTION (38)
	ELECTRON MICROSCOPY (20)

Polymer Entity Type

Protein (58)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (7)
	2.0 - 2.5 (11)
	2.5 - 3.0 (14)
	3.0 - 3.5 (12)
	3.5 - 4.0 (8)
	4.0 - 4.5 (4)

Release Date

	2005 - 2009 (4)
	2010 - 2014 (2)
	2015 - 2019 (17)
	2020 - 2024 (29)
	2025 - 2029 (6)

Enzyme Classification Name

	Transferases (11)
	Hydrolases (7)
	Oxidoreductases (3)
	Ligases (4)

Membrane Protein Annotation

	PDBTM (4)
	MemProtMD (3)
	OPM (2)
	mpstruc (2)

Symmetry Type

	Asymmetric (34)
	Cyclic (22)
	Dihedral (1)
	Octahedral (1)

SCOP Classification

	Alpha and beta proteins (a+b) (9)
	All beta proteins (7)
	Artifacts (9)
	All alpha proteins (3)
	Alpha and beta proteins (a/b) (1)

AllSelected

1 to 25 of 58 Structures

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2P5B \| pdb_00002p5b	Download File View File

The complex structure of JMJD2A and trimethylated H3K36 peptide

Zhang, G., Chen, Z., Zang, J., Hong, X., Shi, Y.

(2007) Proc Natl Acad Sci U S A 104: 10818-10823

Released	2007-06-12
Method	X-RAY DIFFRACTION 1.99 Å
Organisms	Homo sapiens Urechis caupo
Macromolecule	Histone H3 (protein) JmjC domain-containing histone demethylation protein 3A (protein)
Unique Ligands	FE2, OGA, OXY, ZN

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2PXJ \| pdb_00002pxj	Download File View File

The complex structure of JMJD2A and monomethylated H3K36 peptide

Chen, Z., Zang, J., Kappler, J., Hong, X., Crawford, F., Zhang, G.

(2007) Proc Natl Acad Sci U S A 104: 10818-10823

Released	2007-06-12
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	JmjC domain-containing histone demethylation protein 3A (protein) monomethylated Histone H3K36 peptide (protein)
Unique Ligands	FE2, OGA, ZN

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3B54 \| pdb_00003b54	Download File View File

Saccharomyces cerevisiae nucleoside diphosphate kinase

Wang, H.B., Bao, R., Cheng, Y.X.

(2008) Acta Crystallogr Sect F Struct Biol Cryst Commun 64: 572-576

Released	2008-10-07
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Nucleoside diphosphate kinase (protein)
Unique Ligands	PO4

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3BXV \| pdb_00003bxv	Download File View File

Crystal structure studies on sulfur oxygenase reductase from Acidianus tengchongensis

Chang, W.R., Li, M.

(2008) Biochem Biophys Res Commun 369: 919-923

Released	2009-01-20
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Acidianus tengchongensis
Macromolecule	Sulfur oxygenase/reductase (protein)
Unique Ligands	FE

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4DUI \| pdb_00004dui	Download File View File

DARPIN D1 binding to tubulin beta chain (not in complex)

Pecqueur, L., Duellberg, C., Dreier, B., Wang, Q., Jiang, C., Pluckthun, A., Surrey, T., Gigant, B., Knossow, M.

To be published

Released	2013-02-27
Method	X-RAY DIFFRACTION 1.16 Å
Organisms	synthetic construct
Macromolecule	DESIGNED ANKYRIN REPEAT PROTEIN (DARPIN) D1 (protein)
Unique Ligands	MPD, MRD

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4WCW \| pdb_00004wcw	Download File View File

Ribosomal silencing factor during starvation or stationary phase (RsfS) from Mycobacterium tuberculosis

Li, X., Sun, Q., Jiang, C., Yang, K., Hung, L., Zhang, J., Sacchettini, J., TB Structural Genomics Consortium (TBSGC)

(2015) Structure 23: 1858-1865

Released	2014-09-24
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	Ribosomal silencing factor RsfS (protein)
Unique Ligands	MG, MPD

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5C7J \| pdb_00005c7j	Download File View File

CRYSTAL STRUCTURE OF NEDD4 WITH A UB VARIANT

Walker, J.R., Hu, J., Dong, A., Bountra, C., Edwards, A.M., Arrowsmith, C.H., Tong, Y., Structural Genomics Consortium (SGC)

(2016) Mol Cell 62: 121-136

Released	2016-03-16
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	E3 ubiquitin-protein ligase NEDD4 (protein) Polyubiquitin-C (protein)

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5C7M \| pdb_00005c7m	Download File View File

CRYSTAL STRUCTURE OF E3 LIGASE ITCH WITH A UB VARIANT

Walker, J.R., Hu, J., Dong, A., Wernimont, A., Zhang, W., Sidhu, S., Bountra, C., Edwards, A.M., Arrowsmith, C.H., Tong, Y., Structural Genomics Consortium (SGC)

(2016) Mol Cell 62: 121-136

Released	2016-03-16
Method	X-RAY DIFFRACTION 3.03 Å
Organisms	Homo sapiens
Macromolecule	E3 ubiquitin-protein ligase Itchy homolog (protein) Polyubiquitin-C (protein)

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5GWE \| pdb_00005gwe	Download File View File

cytochrome P450 CREJ

Dong, S., liu, X., Wang, X., Feng, Y.

(2017) Proc Natl Acad Sci U S A 114: E5129-E5137

Released	2017-07-12
Method	X-RAY DIFFRACTION 2 Å
Organisms	Corynebacterium glutamicum ATCC 13032
Macromolecule	Cytochrome P450 (protein)
Unique Ligands	GWM, HEM, SO4

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5HPK \| pdb_00005hpk	Download File View File

System-wide modulation of HECT E3 ligases with selective ubiquitin variant probes: NEDD4L and UbV NL.1

Wu, K.-P., Mukherjee, M., Mercredi, P.Y., Schulman, B.A.

(2016) Mol Cell 62: 121-136

Released	2016-03-16
Method	X-RAY DIFFRACTION 2.431 Å
Organisms	Homo sapiens
Macromolecule	E3 ubiquitin-protein ligase NEDD4-like (protein) Ubiquitin variant NL.1 (protein)

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5HPL \| pdb_00005hpl	Download File View File

System-wide modulation of HECT E3 ligases with selective ubiquitin variant probes: Rsp5 and UbV R5.4

Wu, K.-P., Kamadurai, H.B., Schulman, B.A.

(2016) Mol Cell 62: 121-136

Released	2016-03-16
Method	X-RAY DIFFRACTION 2.31 Å
Organisms	Homo sapiens Saccharomyces cerevisiae
Macromolecule	Rsp5 (protein) Ubiquitin variant R5.4 (protein)

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5HPS \| pdb_00005hps	Download File View File

System-wide modulation of HECT E3 ligases with selective ubiquitin variant probes: WWP1 and UbV P1.1

Wu, K.-P., Mercredi, P.Y., Schulman, B.A.

(2016) Mol Cell 62: 121-136

Released	2016-03-16
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Homo sapiens
Macromolecule	Ubiquitin variant P1.1 (protein) WWP1 HECT (protein)

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5HPT \| pdb_00005hpt	Download File View File

System-wide modulation of HECT E3 ligases with selective ubiquitin variant probes: WWP1, Ubv P2.3 and UBCH7

Wu, K.-P., Schulman, B.A.

(2016) Mol Cell 62: 121-136

Released	2016-03-16
Method	X-RAY DIFFRACTION 2.84 Å
Organisms	Homo sapiens
Macromolecule	NEDD4-like E3 ubiquitin-protein ligase WWP1 (protein) Ubiquitin variant P2.3 (protein) Ubiquitin-conjugating enzyme E2 L3 (protein)

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5UKN \| pdb_00005ukn	Download File View File

Structure of unliganded anti-gp120 CD4bs antibody DH522UCA Fab

Nicely, N.I.

(2017) Nat Commun 8: 1732-1732

Released	2017-12-06
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Macaca mulatta
Macromolecule	DH522UCA Fab fragment heavy chain (protein) DH522UCA Fab fragment light chain (protein)
Unique Ligands	CL

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5UKO \| pdb_00005uko	Download File View File

Structure of unliganded anti-gp120 CD4bs antibody DH522IA Fab

Nicely, N.I.

(2017) Nat Commun 8: 1732-1732

Released	2017-12-06
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Macaca mulatta
Macromolecule	DH522IA Fab fragment heavy chain (protein) DH522IA Fab fragment light chain (protein)

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5UKP \| pdb_00005ukp	Download File View File

Structure of unliganded anti-gp120 CD4bs antibody DH522.1 Fab

Nicely, N.I.

(2017) Nat Commun 8: 1732-1732

Released	2017-12-06
Method	X-RAY DIFFRACTION 2 Å
Organisms	Macaca mulatta
Macromolecule	DH522.1 Fab fragment heavy chain (protein) DH522.1 Fab fragment light chain (protein)

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5UKQ \| pdb_00005ukq	Download File View File

Structure of unliganded anti-gp120 CD4bs antibody DH522.2 Fab

Nicely, N.I.

(2017) Nat Commun 8: 1732-1732

Released	2017-12-06
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Macaca mulatta
Macromolecule	DH522.2 Fab fragment heavy chain (protein) DH522.2 Fab fragment light chain (protein)
Unique Ligands	GOL

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5UKR \| pdb_00005ukr	Download File View File

Structure of unliganded anti-gp120 CD4bs antibody DH522.2 Fab in complex with a gp120 core

Nicely, N.I.

(2017) Nat Commun 8: 1732-1732

Released	2017-12-06
Method	X-RAY DIFFRACTION 2.712 Å
Organisms	Human immunodeficiency virus 1 Macaca mulatta
Macromolecule	Chimeric B.YU2 gp120 core derived from HIV-1 Env (protein) DH522.2 Fab fragment heavy chain (protein) DH522.2 Fab fragment light chain (protein)
Unique Ligands	NAG

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5XJN \| pdb_00005xjn	Download File View File

cytochrome P450 CREJ in complex with (4-ethylphenyl) dihydrogen phosphate

Dong, S., Du, L., Li, S., Feng, Y.

(2017) Proc Natl Acad Sci U S A 114: E5129-E5137

Released	2017-07-12
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Corynebacterium glutamicum ATCC 13032
Macromolecule	Cytochrome P450 (protein)
Unique Ligands	88L, HEM

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5ZBZ \| pdb_00005zbz	Download File View File

Crystal structure of the DEAD domain of Human eIF4A with sanguinarine

Ding, Y., Ding, L.

(2019) Cell Chem Biol 26: 1417-1426.e5

Released	2019-02-20
Method	X-RAY DIFFRACTION 1.30860259206 Å
Organisms	Homo sapiens
Macromolecule	Eukaryotic initiation factor 4A-I (protein)
Unique Ligands	MLI, SAU

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6UM5 \| pdb_00006um5	Download File View File

Cryo-EM structure of HIV-1 neutralizing antibody DH270 UCA3 in complex with CH848 10.17DT Env

Acharya, P., Henderson, R.C., Saunders, K.O., Haynes, B.F.

(2019) Science 366:

Released	2019-12-18
Method	ELECTRON MICROSCOPY 4.2 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	CH848 10.17 DT gp120 (protein) DH270 UCA3 Fab Heavy Chain (protein) DH270 UCA3 Fab Light Chain (protein) Envelope glycoprotein gp160 (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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6UM6 \| pdb_00006um6	Download File View File

Cryo-EM structure of HIV-1 neutralizing antibody DH270.6 in complex with CH848 10.17DT Env

Acharya, P., Henderson, R.C., Saunder, K.O., Haynes, B.F.

(2019) Science 366:

Released	2019-12-18
Method	ELECTRON MICROSCOPY 4.3 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	CH848 10.17DT gp120 (protein) CH848 10.17DT gp41 (protein) DH270.6 Heavy chain (protein) DH270.6 Light chain (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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6UM7 \| pdb_00006um7	Download File View File

Cryo-EM structure of vaccine-elicited HIV-1 neutralizing antibody DH270.mu1 in complex with CH848 10.17DT Env

Acharya, P., Henderson, R.C., Saunders, K., Haynes, B.F.

(2019) Science 366:

Released	2019-12-18
Method	ELECTRON MICROSCOPY 3.5 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	DH270.mu1 Fab Heavy Chain (protein) DH270.mu1 Fab Light chain (protein) Envelope glycoprotein gp120 (protein) Envelope glycoprotein gp41 (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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6WLF \| pdb_00006wlf	Download File View File

Phosphoethanolamine Methyltransferase from the Pine Wilt Nematode Bursaphelenchus xylophilus

Lee, S.G., Jez, J.M.

(2020) Mol Biochem Parasitol 238: 111291-111291

Released	2020-06-17
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Bursaphelenchus xylophilus
Macromolecule	Phosphoethanolamine N-methyltransferase 1 (protein)
Unique Ligands	OPE, SAH