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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Leahy, D.J."

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Search Summary

This query matches 62 Structures.

Refinements

Structure Determination Methodology

experimental (62)

Scientific Name of Source Organism

	Homo sapiens (37)
	Mus musculus (12)
	Rattus norvegicus (10)
	Drosophila melanogaster (7)
	Staphylococcus aureus (3)
	Caenorhabditis elegans (1)

Taxonomy

	Eukaryota (59)
	Bacteria (3)
	Eukaryota (eukaryotes) (3)

Experimental Method

X-RAY DIFFRACTION (62)

Polymer Entity Type

Protein (62)

Refinement Resolution (Å)

	1.0 - 1.5 (3)
	1.5 - 2.0 (17)
	2.0 - 2.5 (19)
	2.5 - 3.0 (15)
	3.0 - 3.5 (7)
	4.0 - 4.5 (1)

Release Date

	1990 - 1994 (5)
	1995 - 1999 (7)
	2000 - 2004 (11)
	2005 - 2009 (19)
	2010 - 2014 (14)
	2015 - 2019 (5)
	2020 - 2024 (1)

Enzyme Classification Name

	Transferases (17)
	Hydrolases (15)
	Ligases (1)

Symmetry Type

	Asymmetric (52)
	Cyclic (13)
	Dihedral (2)

SCOP Classification

	All beta proteins (19)
	Alpha and beta proteins (a+b) (17)
	Alpha and beta proteins (a/b) (10)
	Small proteins (8)
	All alpha proteins (5)
	Artifacts (7)
	Coiled coil proteins (2)

AllSelected

1 to 25 of 62 Structures

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1AT0 \| pdb_00001at0	Download File View File

17-kDA fragment of hedgehog C-terminal autoprocessing domain

Hall, T.M.T., Porter, J.A., Young, K.E., Koonin, E.V., Beachy, P.A., Leahy, D.J.

(1997) Cell 91: 85-97

Released	1997-11-12
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Drosophila melanogaster
Macromolecule	17-HEDGEHOG (protein)

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1BAF \| pdb_00001baf	Download File View File

2.9 ANGSTROMS RESOLUTION STRUCTURE OF AN ANTI-DINITROPHENYL-SPIN-LABEL MONOCLONAL ANTIBODY FAB FRAGMENT WITH BOUND HAPTEN

Leahy, D.J., Brunger, A.T., Fox, R.O., Hynes, T.R.

(1991) J Mol Biology 221: 239-256

Released	1994-01-31
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Mus musculus
Macromolecule	IGG1-KAPPA AN02 FAB (HEAVY CHAIN) (protein) IGG1-KAPPA AN02 FAB (LIGHT CHAIN) (protein)
Unique Ligands	NPP

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1CD8 \| pdb_00001cd8	Download File View File

CRYSTAL STRUCTURE OF A SOLUBLE FORM OF THE HUMAN T CELL CO-RECEPTOR CD8 AT 2.6 ANGSTROMS RESOLUTION

Leahy, D.J., Axel, R., Hendrickson, W.A.

(1992) Cell 68: 1145-1162

Released	1994-01-31
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	T CELL CORECEPTOR CD8 (protein)
Unique Ligands	SO4

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1DDV \| pdb_00001ddv	Download File View File

CRYSTAL STRUCTURE OF THE HOMER EVH1 DOMAIN WITH BOUND MGLUR PEPTIDE

Beneken, J., Tu, J.C., Xiao, B., Worley, P.F., Leahy, D.J.

(2000) Neuron 26: 143-154

Released	2000-05-10
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Rattus norvegicus
Macromolecule	GLGF-DOMAIN PROTEIN HOMER (protein) METABOTROPIC GLUTAMATE RECEPTOR MGLUR5 (protein)

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1DDW \| pdb_00001ddw	Download File View File

HOMER EVH1 DOMAIN UNLIGANDED

Beneken, J., Tu, J.C., Xiao, B., Worley, P.F., Leahy, D.J.

(2000) Neuron 26: 143-154

Released	2000-05-10
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Rattus norvegicus
Macromolecule	GLGF-DOMAIN PROTEIN HOMER (protein)

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1FNF \| pdb_00001fnf	Download File View File

FRAGMENT OF HUMAN FIBRONECTIN ENCOMPASSING TYPE-III REPEATS 7 THROUGH 10

Leahy, D.J., Aukhil, I., Erickson, H.P.

(1996) Cell 84: 155-164

Released	1996-01-29
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	FIBRONECTIN (protein)

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1IJX \| pdb_00001ijx	Download File View File

CRYSTAL STRUCTURE OF THE CYSTEINE-RICH DOMAIN OF SECRETED FRIZZLED-RELATED PROTEIN 3 (SFRP-3;FZB)

Dann III, C.E., Hsieh, J.C., Rattner, A., Sharma, D., Nathans, J., Leahy, D.J.

(2001) Nature 412: 86-90

Released	2001-07-11
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Mus musculus
Macromolecule	SECRETED FRIZZLED-RELATED SEQUENCE PROTEIN 3 (protein)
Unique Ligands	SO4

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1IJY \| pdb_00001ijy	Download File View File

CRYSTAL STRUCTURE OF THE CYSTEINE-RICH DOMAIN OF MOUSE FRIZZLED 8 (MFZ8)

Dann III, C.E., Hsieh, J.C., Rattner, A., Sharma, D., Nathans, J., Leahy, D.J.

(2001) Nature 412: 86-90

Released	2001-07-11
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Mus musculus
Macromolecule	FRIZZLED HOMOLOG 8 (protein)

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1LFA \| pdb_00001lfa	Download File View File

CD11A I-DOMAIN WITH BOUND MN++

Leahy, D.J., Qu, A.

(1995) Proc Natl Acad Sci U S A 92: 10277-10281

Released	1996-01-29
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	CD11A (protein)
Unique Ligands	CL, MN

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1LZ5 \| pdb_00001lz5	Download File View File

STRUCTURAL AND FUNCTIONAL ANALYSES OF THE ARG-GLY-ASP SEQUENCE INTRODUCED INTO HUMAN LYSOZYME

Matsushima, M., Inaka, K., Yamada, T., Sekiguchi, K., Kikuchi, M.

(1993) J Biological Chem 268: 10588-10592

Released	1993-10-31
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	HUMAN LYSOZYME (protein)
Unique Ligands	CL

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1LZ6 \| pdb_00001lz6	Download File View File

STRUCTURAL AND FUNCTIONAL ANALYSES OF THE ARG-GLY-ASP SEQUENCE INTRODUCED INTO HUMAN LYSOZYME

Matsushima, M., Inaka, K., Yamada, T., Sekiguchi, K., Kikuchi, M.

(1993) J Biological Chem 268: 10588-10592

Released	1993-10-31
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	HUMAN LYSOZYME (protein)
Unique Ligands	CL

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1M6B \| pdb_00001m6b	Download File View File

Structure of the HER3 (ERBB3) Extracellular Domain

Leahy, D.J., Cho, H.-S.

(2002) Science 297: 1330-1333

Released	2002-08-02
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	Receptor protein-tyrosine kinase erbB-3 (protein)
Unique Ligands	NAG, SO4
Unique branched monosaccharides	NAG

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1N8Y \| pdb_00001n8y	Download File View File

Crystal structure of the extracellular region of rat HER2

Cho, H.-S., Mason, K., Ramyar, K.X., Stanley, A.M., Gabelli, S.B., Denney Jr., D.W., Leahy, D.J.

(2003) Nature 421: 756-760

Released	2003-02-18
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Rattus norvegicus
Macromolecule	protooncoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

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1N8Z \| pdb_00001n8z	Download File View File

Crystal structure of extracellular domain of human HER2 complexed with Herceptin Fab

Cho, H.-S., Mason, K., Ramyar, K.X., Stanley, A.M., Gabelli, S.B., Denney Jr., D.W., Leahy, D.J.

(2003) Nature 421: 756-760

Released	2003-02-18
Method	X-RAY DIFFRACTION 2.52 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Herceptin Fab (antibody) - heavy chain (protein) Herceptin Fab (antibody) - light chain (protein) Receptor protein-tyrosine kinase erbB-2 (protein)
Unique Ligands	NAG, SO4

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1NQL \| pdb_00001nql	Download File View File

Structure of the extracellular domain of human epidermal growth factor (EGF) receptor in an inactive (low pH) complex with EGF.

Ferguson, K.M., Lemmon, M.A.

(2003) Mol Cell 11: 507-517

Released	2003-03-11
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	epidermal growth factor (protein) epidermal growth factor receptor (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, NAG

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1OT8 \| pdb_00001ot8	Download File View File

Structure of the Ankyrin Domain of the Drosophila Notch Receptor

Zweifel, M.E., Leahy, D.J., Hughson, F.M., Barrick, D.

(2003) Protein Sci 12: 2622-2632

Released	2003-10-28
Method	X-RAY DIFFRACTION 2 Å
Organisms	Drosophila melanogaster
Macromolecule	Neurogenic locus Notch protein (protein)
Unique Ligands	MG

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1S78 \| pdb_00001s78	Download File View File

Insights into ErbB signaling from the structure of the ErbB2-pertuzumab complex

Franklin, M.C., Carey, K.D., Vajdos, F.F., Leahy, D.J., de Vos, A.M., Sliwkowski, M.X.

(2004) Cancer Cell 5: 317-328

Released	2004-04-27
Method	X-RAY DIFFRACTION 3.25 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Pertuzumab Fab heavy chain (protein) Pertuzumab Fab light chain (protein) Receptor protein-tyrosine kinase erbB-2 (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, NAG