RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Citation Author = "Marcotte, D."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 39 Structures.

Refinements

Structure Determination Methodology

experimental (39)

Scientific Name of Source Organism

	Homo sapiens (36)
	Mus musculus (5)
	synthetic construct (1)

Taxonomy

	Eukaryota (39)
	other sequences (1)

Experimental Method

X-RAY DIFFRACTION (39)

Polymer Entity Type

Protein (39)

Refinement Resolution (Å)

	1.0 - 1.5 (3)
	1.5 - 2.0 (11)
	2.0 - 2.5 (8)
	2.5 - 3.0 (16)
	3.0 - 3.5 (1)

Release Date

	2010 - 2014 (11)
	2015 - 2019 (12)
	2020 - 2024 (16)

Enzyme Classification Name

	Transferases (27)
	Hydrolases (1)

Symmetry Type

	Asymmetric (37)
	Cyclic (4)
	Tetrahedral (1)

SCOP Classification

	Alpha and beta proteins (a+b) (14)
	All alpha proteins (4)
	All beta proteins (4)
	Artifacts (1)

AllSelected

1 to 25 of 39 Structures

Page 1 of 2

Sort by

Explore in 3D

3KA0 \| pdb_00003ka0	Download File View File

MK2 complex with inhibitor 6-(5-(2-aminopyrimidin-4-ylamino)-2-hydroxyphenyl)-N-methylbenzo[b]thiophene-2-carboxamide

Argiriadi, M.A., Talanian, R.V., Borhani, D.W.

(2010) Bioorg Med Chem Lett 20: 330-333

Released	2010-01-12
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	MAP kinase-activated protein kinase 2 (protein)
Unique Ligands	MK3

Explore in 3D

3KC3 \| pdb_00003kc3	Download File View File

MK2 complexed to inhibitor N4-(7-(benzofuran-2-yl)-1H-indazol-5-yl)pyrimidine-2,4-diamine

Argiriadi, M.A., Talanian, R.V., Borhani, D.W.

(2010) Bioorg Med Chem Lett 20: 330-333

Released	2010-01-12
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	MAP kinase-activated protein kinase 2 (protein)
Unique Ligands	MK2

Explore in 3D

3NEW \| pdb_00003new	Download File View File

p38-alpha complexed with Compound 10

Goedken, E.R., Comess, K.M., Sun, C., Argiriadi, M., Jia, Y., Quinn, C.M., Banach, D.L., Marcotte, D., Borhani, D.

(2011) ACS Chem Biol 6: 234-244

Released	2010-12-01
Method	X-RAY DIFFRACTION 2.51 Å
Organisms	Homo sapiens
Macromolecule	Mitogen-activated protein kinase 14 (protein)
Unique Ligands	3NE

Explore in 3D

3O17 \| pdb_00003o17	Download File View File

Crystal Structure of JNK1-alpha1 isoform

Abad-Zapatero, C.

To be published

Released	2011-01-12
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	C-Jun-amino-terminal kinase-interacting protein 1, JIP1, 10MER PEPTIDE (protein) Mitogen-activated protein kinase 8 (protein)
Unique Ligands	SO4

Explore in 3D

3O2M \| pdb_00003o2m	Download File View File

Crystal Structure of JNK1-alpha1 isoform complex with a biaryl tetrazol (A-82118)

Abad-Zapatero, C.

(2011) ACS Chem Biol 6: 234-244

Released	2011-01-12
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	C-Jun-amino-terminal kinase-interacting protein 1, JIP1, 10MER PEPTIDE (protein) Mitogen-activated protein kinase 8 (protein)
Unique Ligands	46A, SO4

Explore in 3D

3R21 \| pdb_00003r21	Download File View File

Design, synthesis, and biological evaluation of pyrazolopyridine-sulfonamides as potent multiple-mitotic kinase (MMK) inhibitors (Part I)

Zhang, L., Fan, J., Chong, J.-H., Cesena, A., Tam, B., Gilson, C., Boykin, C., Wang, D., Marcotte, D., Le Brazidec, J.-Y., Aivazian, D., Piao, J., Lundgren, K., Hong, K., Vu, K., Nguyen, K.

(2011) Bioorg Med Chem Lett 21: 5633-5637

Released	2011-08-10
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	Serine/threonine-protein kinase 6 (protein)
Unique Ligands	D36, MG

Explore in 3D

3R22 \| pdb_00003r22	Download File View File

Design, synthesis, and biological evaluation of pyrazolopyridine-sulfonamides as potent multiple-mitotic kinase (MMK) inhibitors (Part I)

Zhang, L., Fan, J., Chong, J.-H., Cesana, A., Tam, B., Gilson, C., Boykin, C., Wang, D., Marcotte, D., Le Brazidec, J.-Y., Aivazian, D., Piao, J., Lundgren, K., Hong, K., Vu, K., Nguyen, K.

(2011) Bioorg Med Chem Lett 21: 5633-5637

Released	2011-08-10
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	Serine/threonine-protein kinase 6 (protein)
Unique Ligands	D37

Explore in 3D

4E1Z \| pdb_00004e1z	Download File View File

Structure of mouse Tyk-2 complexed to a 3-aminoindazole inhibitor

Argiriadi, M.A., Talanian, R.V., Borhani, D.W.

(2012) BMC Struct Biol 12: 22-22

Released	2012-10-03
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Mus musculus
Macromolecule	Non-receptor tyrosine-protein kinase TYK2 (protein)
Unique Ligands	0MX

Explore in 3D

4E20 \| pdb_00004e20	Download File View File

Structure of mouse Tyk-2 complexed to a 3-aminoindazole inhibitor

Argiriadi, M.A., Talanian, R.V., Borhani, D.W.

(2012) BMC Struct Biol 12: 22-22

Released	2012-10-03
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Mus musculus
Macromolecule	Non-receptor tyrosine-protein kinase TYK2 (protein)
Unique Ligands	0MY

Explore in 3D

4IN4 \| pdb_00004in4	Download File View File

Crystal structure of cpd 15 bound to Keap1 Kelch domain

Silvian, L., Marcotte, D.

(2013) Bioorg Med Chem 21: 4011-4019

Released	2013-05-15
Method	X-RAY DIFFRACTION 2.59 Å
Organisms	Homo sapiens
Macromolecule	Kelch-like ECH-associated protein 1 (protein)
Unique Ligands	4ID, PO4

Explore in 3D

4IQK \| pdb_00004iqk	Download File View File

Crystal structure of cpd 16 bound to Keap1 Kelch domain

Silvian, L., Marcotte, D.

(2013) Bioorg Med Chem 21: 4011-4019

Released	2013-05-15
Method	X-RAY DIFFRACTION 1.97 Å
Organisms	Homo sapiens
Macromolecule	Kelch-like ECH-associated protein 1 (protein)
Unique Ligands	IQK

Explore in 3D

4QPS \| pdb_00004qps	Download File View File

Crystal structure of Jak3 complexed to N-[3-(6-Phenylamino-pyrazin-2-yl)-3H-benzoimidazol-5-yl]-acrylamide

Argiriadi, M.A., Goedken, E.R.

(2015) J Biological Chem 290: 4573-4589

Released	2015-01-14
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Tyrosine-protein kinase JAK3 (protein)
Unique Ligands	37Q

Explore in 3D

4X7Q \| pdb_00004x7q	Download File View File

PIM2 kinase in complex with Compound 1s

Marcotte, D.J., Silvian, L.F.

(2015) Bioorg Med Chem Lett 25: 474-480

Released	2015-02-11
Method	X-RAY DIFFRACTION 2.33 Å
Organisms	Homo sapiens
Macromolecule	Serine/threonine-protein kinase pim-2 (protein)
Unique Ligands	3YR, PO4

Explore in 3D

4XHK \| pdb_00004xhk	Download File View File

PIM1 kinase in complex with Compound 1s

Marcotte, D.J., Silvian, L.F.

(2015) Bioorg Med Chem Lett 25: 474-480

Released	2015-02-11
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Serine/threonine-protein kinase pim-1 (protein)
Unique Ligands	3YR

Explore in 3D

4ZJR \| pdb_00004zjr	Download File View File

RORgamma in complex with inverse agonist 48

Marcotte, D.J.

(2015) Bioorg Med Chem Lett 25: 2991-2997

Released	2015-06-17
Method	X-RAY DIFFRACTION 2.702 Å
Organisms	Homo sapiens
Macromolecule	Nuclear receptor ROR-gamma (protein)
Unique Ligands	4P3

Explore in 3D

4ZJW \| pdb_00004zjw	Download File View File

RORgamma in complex with inverse agonist 16

Marcotte, D.J.

(2015) Bioorg Med Chem Lett 25: 2991-2997

Released	2015-06-17
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	Nuclear receptor ROR-gamma (protein)
Unique Ligands	4P1

Explore in 3D

4ZOM \| pdb_00004zom	Download File View File

RORgamma in complex with inverse agonist 4j.

Marcotte, D.J.

(2015) Bioorg Med Chem Lett 25: 2985-2990

Released	2015-06-17
Method	X-RAY DIFFRACTION 2.27 Å
Organisms	Homo sapiens
Macromolecule	Nuclear receptor ROR-gamma (protein)
Unique Ligands	4Q3

Explore in 3D

5EJV \| pdb_00005ejv	Download File View File

RORy in complex with T090131718 and Coactivator peptide EBI96

Marcotte, D.M.

(2016) Bioorg Med Chem Lett 26: 2459-2463

Released	2016-04-27
Method	X-RAY DIFFRACTION 2.58 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	EBI96 Coactivator Peptide (protein) Nuclear receptor ROR-gamma (protein)
Unique Ligands	444

Explore in 3D

5ETH \| pdb_00005eth	Download File View File

RORy in complex with inverse agonist 3.

Marcotte, D.M.

(2016) Bioorg Med Chem Lett 26: 2459-2463

Released	2016-04-27
Method	X-RAY DIFFRACTION 2.803 Å
Organisms	Homo sapiens
Macromolecule	Nuclear receptor ROR-gamma (protein)
Unique Ligands	5RT

Explore in 3D

5J5T \| pdb_00005j5t	Download File View File

GLK co-crystal structure with aminopyrrolopyrimidine inhibitor

Silvian, L.F., Marcotte, D.

(2017) Protein Sci 26: 152-162

Released	2016-10-26
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Homo sapiens
Macromolecule	Mitogen-activated protein kinase kinase kinase kinase 3 (protein)
Unique Ligands	6G2

Explore in 3D

5KNJ \| pdb_00005knj	Download File View File

Pseudokinase Domain of MLKL bound to Compound 1.

Marcotte, D.J.

(2016) PLoS One 11: e0165983-e0165983

Released	2016-11-16
Method	X-RAY DIFFRACTION 2.88 Å
Organisms	Homo sapiens
Macromolecule	Mixed lineage kinase domain-like protein (protein)
Unique Ligands	6UX

Explore in 3D

5KO1 \| pdb_00005ko1	Download File View File

Pseudokinase Domain of MLKL bound to Compound 4.

Marcotte, D.J.

(2016) PLoS One 11: e0165983-e0165983

Released	2016-11-16
Method	X-RAY DIFFRACTION 2.16 Å
Organisms	Homo sapiens
Macromolecule	Mixed lineage kinase domain-like protein (protein)
Unique Ligands	6UY

Explore in 3D

6NZM \| pdb_00006nzm	Download File View File

Brutons tyrosine kinase in complex with compound 50.

Marcotte, D.J.

(2019) Bioorg Med Chem 27: 2905-2913

Released	2019-06-12
Method	X-RAY DIFFRACTION 1.72 Å
Organisms	Homo sapiens
Macromolecule	Tyrosine-protein kinase BTK (protein)
Unique Ligands	EDO, L9S

Explore in 3D

6TYM \| pdb_00006tym	Download File View File

KEAP1 Kelch domain in complex with Compound 9

Marcotte, D.J.

(2020) Bioorg Med Chem Lett 30: 126852-126852

Released	2020-01-15
Method	X-RAY DIFFRACTION 1.422 Å
Organisms	Homo sapiens
Macromolecule	Kelch-like ECH-associated protein 1 (protein)
Unique Ligands	08A, DMS, GOL