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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Nicolaou, K.C."

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Search Summary

This query matches 9 Structures.

Refinements

Structure Determination Methodology

experimental (9)

Scientific Name of Source Organism

	Mus musculus (4)
	Gallus gallus (2)
	Homo sapiens (2)
	Rattus norvegicus (2)
	Sus scrofa (2)
	Hirudo medicinalis (1)
	Theonella sp. (1)
	synthetic construct (1)

Taxonomy

	Eukaryota (8)
	Eukaryota (eukaryotes) (1)
	other sequences (1)

Experimental Method

	X-RAY DIFFRACTION (8)
	SOLUTION NMR (1)

Polymer Entity Type

	Protein (8)
	DNA (1)

Refinement Resolution (Å)

	1.5 - 2.0 (1)
	2.0 - 2.5 (5)
	2.5 - 3.0 (1)
	3.0 - 3.5 (1)

Release Date

	1990 - 1994 (1)
	1995 - 1999 (2)
	2000 - 2004 (4)
	2020 - 2024 (2)

Enzyme Classification Name

	Transferases (4)
	Hydrolases (3)

Symmetry Type

Asymmetric (8)

SCOP Classification

	Alpha and beta proteins (a+b) (5)
	Alpha and beta proteins (a/b) (1)
	All alpha proteins (2)
	All beta proteins (1)
	Artifacts (2)

AllSelected

1 to 9 of 9 Structures

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1BX6 \| pdb_00001bx6	Download File View File

CRYSTAL STRUCTURE OF THE POTENT NATURAL PRODUCT INHIBITOR BALANOL IN COMPLEX WITH THE CATALYTIC SUBUNIT OF CAMP-DEPENDENT PROTEIN KINASE

Narayana, N., Xuong, N.-H., Ten Eyck, L.F., Taylor, S.S.

(1999) Biochemistry 38: 2367-2376

Released	1999-04-27
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Mus musculus
Macromolecule	CAMP-DEPENDENT PROTEIN KINASE (protein)
Unique Ligands	BA1

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1OSH \| pdb_00001osh	Download File View File

A Chemical, Genetic, and Structural Analysis of the nuclear bile acid receptor FXR

Downes, M., Verdecia, M.A., Roecker, A.J., Hughes, R., Hogenesch, J.B., Kast-Woelbern, H.R., Bowman, M.E., Ferrer, J.-L., Anisfeld, A.M., Edwards, P.A., Rosenfeld, J.M., Alvarez, J.G.A., Noel, J.P., Nicolaou, K.C., Evans, R.M.

(2003) Mol Cell 11: 1079-1092

Released	2003-09-23
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Bile acid receptor (protein)
Unique Ligands	FEX

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1QMS \| pdb_00001qms	Download File View File

Head-to-Tail Dimer of Calicheamicin gamma-1-I Oligosaccharide Bound to DNA Duplex, NMR, 9 Structures

Bifulco, G., Galeone, A., Nicolaou, K.C., Chazin, W.J., Gomez-Paloma, L.

(1998) J Am Chem Soc 120: 7183-7191

Released	1999-10-12
Method	SOLUTION NMR
Organisms	synthetic construct
Macromolecule	DNA (5'-D(GPCPAPCPCPTPTPCPCPTPGPC)-3') (nucleic acid) DNA (5'-D(GPCPAPGPGPAPAPGPGPTPGPC)-3') (nucleic acid)
Unique Ligands	CCI, NBU

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1RE8 \| pdb_00001re8	Download File View File

Crystal structure of cAMP-dependent protein kinase complexed with balanol analog 2

Akamine, P., Madhusudan, Brunton, L.L., Ou, H.D., Canaves, J.M., Xuong, N.H., Taylor, S.S.

(2004) Biochemistry 43: 85-96

Released	2004-02-24
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Mus musculus
Macromolecule	cAMP-dependent protein kinase, alpha-catalytic subunit (protein)
Unique Ligands	BD2, OCT

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1REJ \| pdb_00001rej	Download File View File

Crystal structure of cAMP-dependent protein kinase complexed with balanol analog 1

Akamine, P., Madhusudan, Brunton, L.L., Ou, H.D., Canaves, J.M., Xuong, N.H., Taylor, S.S.

(2004) Biochemistry 43: 85-96

Released	2004-02-24
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Mus musculus
Macromolecule	cAMP-dependent protein kinase, alpha-catalytic subunit (protein)
Unique Ligands	B1L

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1REK \| pdb_00001rek	Download File View File

Crystal structure of cAMP-dependent protein kinase complexed with balanol analog 8

Akamine, P., Madhusudan, Brunton, L.L., Ou, H.D., Canaves, J.M., Xuong, N.H., Taylor, S.S.

(2004) Biochemistry 43: 85-96

Released	2004-02-24
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Mus musculus
Macromolecule	cAMP-dependent protein kinase, alpha-catalytic subunit (protein)
Unique Ligands	B8L, PTL

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1TMB \| pdb_00001tmb	Download File View File

MOLECULAR BASIS FOR THE INHIBITION OF HUMAN ALPHA-THROMBIN BY THE MACROCYCLIC PEPTIDE CYCLOTHEONAMIDE A

Qiu, X., Padmanabhan, K.P., Maryanoff, B.E., Tulinsky, A.

(1993) Proc Natl Acad Sci U S A 90: 8048-8052

Released	1994-01-31
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Hirudo medicinalis Homo sapiens Theonella sp.
Macromolecule	ALPHA-THROMBIN (LARGE SUBUNIT) (protein) ALPHA-THROMBIN (SMALL SUBUNIT) (protein) HIRUGEN (protein) cyclotheonamide A (protein)

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6Y4M \| pdb_00006y4m	Download File View File

Structure of Tubulin Tyrosine Ligase in Complex with Tb111

Gavrilyuk, J., Nocek, B., Rigol, S., Nicolaou, K.C., Stoll, V.

(2021) J Org Chem 86: 3377-3421

Released	2021-03-31
Method	X-RAY DIFFRACTION 3.34 Å
Organisms	Gallus gallus Rattus norvegicus Sus scrofa
Macromolecule	Stathmin-4 (protein) Tubulin alpha-1B chain (protein) Tubulin beta chain (protein) Tubulin-Tyrosine Ligase (protein)
Unique Ligands	ACP, CA, GDP, GTP, MES, MG, O9B, O9H, OH5, PGE, VAL

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6Y4N \| pdb_00006y4n	Download File View File

Structure of Tubulin Tyrosine Ligase in Complex with Tb116

Gavrilyuk, J., Nocek, B., Rigol, S., Nicolaou, K.C., Stoll, V.

(2021) J Org Chem 86: 3377-3421

Released	2021-03-31
Method	X-RAY DIFFRACTION 2.852 Å
Organisms	Gallus gallus Rattus norvegicus Sus scrofa
Macromolecule	Stathmin-4 (protein) Tubulin alpha-1B chain (protein) Tubulin beta chain (protein) Tubulin-Tyrosine Ligase (protein)
Unique Ligands	ACP, CA, GDP, GTP, MES, MG, O9B, O9K, O9N, P6S, PEG, PGE, VAL

1 to 9 of 9 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1BX6 | pdb_00001bx6

CRYSTAL STRUCTURE OF THE POTENT NATURAL PRODUCT INHIBITOR BALANOL IN COMPLEX WITH THE CATALYTIC SUBUNIT OF CAMP-DEPENDENT PROTEIN KINASE

1OSH | pdb_00001osh

A Chemical, Genetic, and Structural Analysis of the nuclear bile acid receptor FXR

1QMS | pdb_00001qms

Head-to-Tail Dimer of Calicheamicin gamma-1-I Oligosaccharide Bound to DNA Duplex, NMR, 9 Structures

1RE8 | pdb_00001re8

Crystal structure of cAMP-dependent protein kinase complexed with balanol analog 2

1REJ | pdb_00001rej

Crystal structure of cAMP-dependent protein kinase complexed with balanol analog 1

1REK | pdb_00001rek

Crystal structure of cAMP-dependent protein kinase complexed with balanol analog 8

1TMB | pdb_00001tmb

MOLECULAR BASIS FOR THE INHIBITION OF HUMAN ALPHA-THROMBIN BY THE MACROCYCLIC PEPTIDE CYCLOTHEONAMIDE A

6Y4M | pdb_00006y4m

Structure of Tubulin Tyrosine Ligase in Complex with Tb111

6Y4N | pdb_00006y4n

Structure of Tubulin Tyrosine Ligase in Complex with Tb116

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1BX6 | pdb_00001bx6

1OSH | pdb_00001osh

1QMS | pdb_00001qms

1RE8 | pdb_00001re8

1REJ | pdb_00001rej

1REK | pdb_00001rek

1TMB | pdb_00001tmb

6Y4M | pdb_00006y4m

6Y4N | pdb_00006y4n