RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Citation Author = "Phillips, S.E.V."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 75 Structures.

Refinements

Structure Determination Methodology

experimental (75)

Scientific Name of Source Organism

	Homo sapiens (19)
	Escherichia coli (10)
	Escherichia phage MS2 (8)
	Mus musculus (6)
	synthetic construct (6)
	Mycothermus thermophilus (4)
	Escherichia coli BL21(DE3) (3)
	Fusarium graminearum (3)
	Hypomyces rosellus (3)
	Escherichia coli K-12 (2)

More...

Taxonomy

	Eukaryota (43)
	Bacteria (16)
	Riboviria (9)
	other sequences (6)
	Viruses incertae sedis (1)

Experimental Method

	X-RAY DIFFRACTION (74)
	ELECTRON MICROSCOPY (1)

Polymer Entity Type

	Protein (69)
	RNA (8)
	DNA (7)

Refinement Resolution (Å)

	1.0 - 1.5 (5)
	1.5 - 2.0 (32)
	2.0 - 2.5 (20)
	2.5 - 3.0 (13)
	3.0 - 3.5 (4)
	3.5 - 4.0 (1)

Release Date

	1980 - 1984 (2)
	1985 - 1989 (1)
	1990 - 1994 (5)
	1995 - 1999 (4)
	2000 - 2004 (6)
	2005 - 2009 (16)
	2010 - 2014 (13)
	2015 - 2019 (28)

Enzyme Classification Name

	Hydrolases (17)
	Oxidoreductases (17)
	Lyases (9)
	Isomerases (2)
	Transferases (1)

Symmetry Type

	Asymmetric (30)
	Dihedral (21)
	Cyclic (10)
	Icosahedral (9)
	Helical (1)

SCOP Classification

	Alpha and beta proteins (a/b) (27)
	Artifacts (27)
	All beta proteins (21)
	Alpha and beta proteins (a+b) (9)
	All alpha proteins (5)
	Multi-domain proteins (alpha and beta) (2)

AllSelected

1 to 25 of 75 Structures

Page 1 of 3

Sort by

Explore in 3D

1BQ4 \| pdb_00001bq4	Download File View File

SACCHAROMYCES CEREVISIAE PHOSPHOGLYCERATE MUTASE IN COMPLEX WITH BENZENE HEXACARBOXYLATE

Rigden, D.J., Phillips, S.E.V., Fothergill-Gilmore, L.A.

(1999) J Mol Biology 289: 691-699

Released	1998-08-26
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	PROTEIN (PHOSPHOGLYCERATE MUTASE 1) (protein)
Unique Ligands	BHC, SO4

Explore in 3D

1CMA \| pdb_00001cma	Download File View File

MET REPRESSOR/DNA COMPLEX + S-ADENOSYL-METHIONINE

Somers, W.S., Phillips, S.E.V.

(1992) Nature 359: 387-393

Released	1993-10-31
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Escherichia coli
Macromolecule	PROTEIN (MET REPRESSOR) (protein) DNA (5'-D(APGPAPCPGPTPCPTPA)-3') (nucleic acid) DNA (5'-D(TPTPAPGPAPCPGPTPCP*T)-3') (nucleic acid)
Unique Ligands	SAM

Explore in 3D

1D2E \| pdb_00001d2e	Download File View File

CRYSTAL STRUCTURE OF MITOCHONDRIAL EF-TU IN COMPLEX WITH GDP

Andersen, G.R., Thirup, S., Spremulli, L.L., Nyborg, J.

(2000) J Mol Biology 297: 421-436

Released	1999-09-28
Method	X-RAY DIFFRACTION 1.94 Å
Organisms	Bos taurus
Macromolecule	ELONGATION FACTOR TU (EF-TU) (protein)
Unique Ligands	GDP, MG

Explore in 3D

1DYU \| pdb_00001dyu	Download File View File

The active site base controls cofactor reactivity in Escherichia coli amine oxidase: X-ray crystallographic studies with mutational variants.

Murray, J.M., Wilmot, C.M., Saysell, C.G., Jaeger, J., Knowles, P.F., Phillips, S.E.V., McPherson, M.J.

(1999) Biochemistry 38: 8217

Released	2000-02-29
Method	X-RAY DIFFRACTION 2.04 Å
Organisms	Escherichia coli
Macromolecule	COPPER AMINE OXIDASE (protein)
Unique Ligands	CA, CU

Explore in 3D

1GOF \| pdb_00001gof	Download File View File

NOVEL THIOETHER BOND REVEALED BY A 1.7 ANGSTROMS CRYSTAL STRUCTURE OF GALACTOSE OXIDASE

Ito, N., Phillips, S.E.V., Knowles, P.F.

(1991) Nature 350: 87-90

Released	1994-01-31
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Hypomyces rosellus
Macromolecule	GALACTOSE OXIDASE (protein)
Unique Ligands	ACY, CU, NA

Explore in 3D

1GOG \| pdb_00001gog	Download File View File

NOVEL THIOETHER BOND REVEALED BY A 1.7 ANGSTROMS CRYSTAL STRUCTURE OF GALACTOSE OXIDASE

Ito, N., Phillips, S.E.V., Knowles, P.F.

(1991) Nature 350: 87-90

Released	1994-01-31
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Hypomyces rosellus
Macromolecule	GALACTOSE OXIDASE (protein)
Unique Ligands	CU, NA

Explore in 3D

1GOH \| pdb_00001goh	Download File View File

NOVEL THIOETHER BOND REVEALED BY A 1.7 ANGSTROMS CRYSTAL STRUCTURE OF GALACTOSE OXIDASE

Ito, N., Phillips, S.E.V., Knowles, P.F.

(1991) Nature 350: 87-90

Released	1994-01-31
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Hypomyces rosellus
Macromolecule	GALACTOSE OXIDASE (protein)
Unique Ligands	NA

Explore in 3D

1LVN \| pdb_00001lvn	Download File View File

CRYSTAL STRUCTURE OF E. COLI AMINE OXIDASE COMPLEXED WITH TRANYLCYPROMINE

Wilmot, C.M., Phillips, S.E.

(2004) FEBS Lett 576: 301-305

Released	2003-08-05
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Escherichia coli
Macromolecule	Copper amine oxidase (protein)
Unique Ligands	CA, CU

Explore in 3D

1MBD \| pdb_00001mbd	Download File View File

X-ray structure of sperm whale deoxymoglobin refined at 1.4A resolution

Phillips, S.E.V.

To be published

Released	1982-02-03
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Physeter macrocephalus
Macromolecule	MYOGLOBIN (protein)
Unique Ligands	HEM, SO4

Explore in 3D

1MBO \| pdb_00001mbo	Download File View File

Structure and refinement of oxymyoglobin at 1.6 angstroms resolution

Phillips, S.E.V.

(1980) J Mol Biology 142: 531-554

Released	1982-02-03
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Physeter macrocephalus
Macromolecule	MYOGLOBIN (protein)
Unique Ligands	HEM, OXY, SO4

Explore in 3D

1MUP \| pdb_00001mup	Download File View File

PHEROMONE BINDING TO TWO RODENT URINARY PROTEINS REVEALED BY X-RAY CRYSTALLOGRAPHY

Bocskei, Z., Flower, D.R., Groom, C.R., Phillips, S.E.V., North, A.C.T.

(1992) Nature 360: 186-188

Released	1994-01-31
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Mus musculus
Macromolecule	MAJOR URINARY PROTEIN (protein)
Unique Ligands	CD, TZL

Explore in 3D

1QY0 \| pdb_00001qy0	Download File View File

Thermodynamics of Binding of 2-methoxy-3-isopropylpyrazine and 2-methoxy-3-isobutylpyrazine to the Major Urinary Protein

Bingham, R.J., Findlay, J.B.C., Hsieh, S.-Y., Kalverda, A.P., Kjellberg, A., Perazzolo, C., Phillips, S.E.V., Seshadri, K., Trinh, C.H., Turnbull, W.B., Bodenhausen, G., Homans, S.W.

(2004) J Am Chem Soc 126: 1675-1681

Released	2004-02-24
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Mus musculus
Macromolecule	Major urinary protein (protein)
Unique Ligands	CD, GOL, NA

Explore in 3D

1QY1 \| pdb_00001qy1	Download File View File

Thermodynamics of Binding of 2-methoxy-3-isopropylpyrazine and 2-methoxy-3-isobutylpyrazine to the Major Urinary Protein

Bingham, R.J., Findlay, J.B.C., Hsieh, S.-Y., Kalverda, A.P., Kjellberg, A., Perazzolo, C., Phillips, S.E.V., Seshadri, K., Trinh, C.H., Turnbull, W.B., Bodenhausen, G., Homans, S.W.

(2004) J Am Chem Soc 126: 1675-1681

Released	2004-02-24
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Mus musculus
Macromolecule	Major Urinary Protein (protein)
Unique Ligands	CD, NA, PRZ

Explore in 3D

1QY2 \| pdb_00001qy2	Download File View File

Thermodynamics of Binding of 2-methoxy-3-isopropylpyrazine and 2-methoxy-3-isobutylpyrazine to the Major Urinary Protein

Bingham, R.J., Findlay, J.B.C., Hsieh, S.-Y., Kalverda, A.P., Kjellberg, A., Perazzolo, C., Phillips, S.E.V., Seshadri, K., Trinh, C.H., Turnbull, W.B., Bodenhausen, G., Homans, S.W.

(2004) J Am Chem Soc 126: 1675-1681

Released	2004-02-24
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Mus musculus
Macromolecule	Major Urinary Protein (protein)
Unique Ligands	CD, IPZ, NA

Explore in 3D

1T2X \| pdb_00001t2x	Download File View File

Glactose oxidase C383S mutant identified by directed evolution

Wilkinson, D., Akumanyi, N., Hurtado-Guerrero, R., Dawkes, H., Knowles, P.F., Phillips, S.E.V., McPherson, M.J.

(2004) Protein Eng Des Sel 17: 141-148

Released	2004-05-18
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Fusarium sp.
Macromolecule	Galactose Oxidase (protein)
Unique Ligands	ACT, CU, NA

Explore in 3D

1YP6 \| pdb_00001yp6	Download File View File

Van der Waals Interactions Dominate Hydrophobic Association in a Protein Binding Site Occluded From Solvent Water

Barratt, E., Bingham, R.J., Warner, D.J., Laughton, C.A., Phillips, S.E.V., Homans, S.W.

(2005) J Am Chem Soc 127: 11827-11834

Released	2005-08-30
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Mus musculus
Macromolecule	MAJOR URINARY PROTEIN 1 (protein)
Unique Ligands	CD, CL, PRZ

Explore in 3D

1YP7 \| pdb_00001yp7	Download File View File

Van der Waals Interactions Dominate Hydrophobic Association in a Protein Binding Site Occluded From Solvent Water

Barratt, E., Bingham, R.J., Warner, D.J., Laughton, C.A., Phillips, S.E.V., Homans, S.W.

(2005) J Am Chem Soc 127: 11827-11834

Released	2005-08-30
Method	X-RAY DIFFRACTION 2 Å
Organisms	Mus musculus
Macromolecule	MAJOR URINARY PROTEIN 1 (protein)
Unique Ligands	CD

Explore in 3D

1ZSE \| pdb_00001zse	Download File View File

RNA stemloop from bacteriophage Qbeta complexed with an N87S mutant MS2 Capsid

Horn, W.T., Tars, K., Grahn, E., Helgstrand, C., Baron, A.J., Lago, H., Adams, C.J., Peabody, D.S., Phillips, S.E.V., Stonehouse, N.J., Liljas, L., Stockley, P.G.

(2006) Structure 14: 487-495

Released	2006-05-09
Method	X-RAY DIFFRACTION 3 Å
Organisms	Escherichia phage MS2
Macromolecule	Coat protein (protein) RNA HAIRPIN (nucleic acid)

Explore in 3D

2A2G \| pdb_00002a2g	Download File View File

THE CRYSTAL STRUCTURES OF A2U-GLOBULIN AND ITS COMPLEX WITH A HYALINE DROPLET INDUCER.

Chaudhuri, B.N., Kleywegt, G.J., Jones, T.A.

(1999) Acta Crystallogr D Biol Crystallogr 55: 753-762

Released	1999-08-13
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Rattus norvegicus
Macromolecule	PROTEIN (ALPHA-2U-GLOBULIN) (protein)
Unique Ligands	LEO

Explore in 3D

2A2U \| pdb_00002a2u	Download File View File

THE CRYSTAL STRUCTURES OF A2U-GLOBULIN AND ITS COMPLEX WITH A HYALINE DROPLET INDUCER.

Chaudhuri, B.N., Kleywegt, G.J., Jones, T.A.

(1999) Acta Crystallogr D Biol Crystallogr 55: 753-762

Released	1999-08-26
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Rattus norvegicus
Macromolecule	PROTEIN (ALPHA-2U-GLOBULIN) (protein)

Explore in 3D

2B2D \| pdb_00002b2d	Download File View File

RNA stemloop operator from bacteriophage QBETA complexed with an N87S,E89K mutant MS2 capsid

Horn, W.T., Tars, K., Grahn, E., Helgstrand, C., Baron, A.J., Lago, H., Adams, C.J., Peabody, D.S., Phillips, S.E.V., Stonehouse, N.J., Liljas, L., Stockley, P.G.

(2006) Structure 14: 487-495

Released	2006-05-09
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Escherichia phage MS2
Macromolecule	Coat protein (protein) 5'-R(APUPGPCPAPUPGPUPCPUPAPAPGPAPCPAPGPCPAPU)-3' (nucleic acid)

Explore in 3D

2B2E \| pdb_00002b2e	Download File View File

RNA stemloop from bacteriophage MS2 complexed with an N87S,E89K mutant MS2 capsid

Horn, W.T., Tars, K., Grahn, E., Helgstrand, C., Baron, A.J., Lago, H., Adams, C.J., Peabody, D.S., Phillips, S.E.V., Stonehouse, N.J., Liljas, L., Stockley, P.G.

(2006) Structure 14: 487-495

Released	2006-05-09
Method	X-RAY DIFFRACTION 3.15 Å
Organisms	Escherichia phage MS2
Macromolecule	Coat protein (protein) 5'-R(APCPAPUPGPAPGPGPAPUPUPAPCPCPCPAPUPGP*U)-3' (nucleic acid)

Explore in 3D

2B2G \| pdb_00002b2g	Download File View File

MS2 Wild-type RNA stemloop complexed with an N87S mutant MS2 capsid

Horn, W.T., Tars, K., Grahn, E., Helgstrand, C., Baron, A.J., Lago, H., Adams, C.J., Peabody, D.S., Phillips, S.E.V., Stonehouse, N.J., Liljas, L., Stockley, P.G.

(2006) Structure 14: 487-495

Released	2006-05-09
Method	X-RAY DIFFRACTION 3.02 Å
Organisms	Escherichia phage MS2
Macromolecule	Coat protein (protein) 5'-R(APCPAPUPGPAPGPGPAPUPUPAPCPCPCPAPUPGP*U)-3' (nucleic acid)

Explore in 3D

2BNY \| pdb_00002bny	Download File View File

MS2 (N87A mutant) - RNA hairpin complex

Horn, W.T., Tars, K., Grahn, E., Helgstrand, C., Baron, A.J., Lago, H., Adams, C.J., Peabody, D.S., Phillips, S.E.V., Stonehouse, N.J., Liljas, L., Stockley, P.G.

(2006) Structure 14: 487

Released	2006-03-22
Method	X-RAY DIFFRACTION 3 Å
Organisms	Escherichia phage MS2
Macromolecule	MS2 COAT PROTEIN (protein) 5'-R(APCPAPUPGPAPGPGPAPUP UPAPCPCPCPAPUPGP*U)-3' (nucleic acid)

Explore in 3D

2BQ5 \| pdb_00002bq5	Download File View File

MS2 (N87AE89K mutant) - RNA hairpin complex

Horn, W.T., Tars, K., Grahn, E., Helgstrand, C., Baron, A.J., Lago, H., Adams, C.J., Peabody, D.S., Phillips, S.E.V., Stonehouse, N.J., Liljas, L., Stockley, P.G.

(2006) Structure 14: 487

Released	2006-03-22
Method	X-RAY DIFFRACTION 2.91 Å
Organisms	Escherichia phage MS2
Macromolecule	COAT PROTEIN (protein) 5'-R(APCPAPUPGPAPGPGPAPUP UPAPCPCPCPAPUPGP*U)-3' (nucleic acid)

1 to 25 of 75 Structures

Page 1 of 3

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1BQ4 | pdb_00001bq4

1CMA | pdb_00001cma

1D2E | pdb_00001d2e

1DYU | pdb_00001dyu

1GOF | pdb_00001gof

1GOG | pdb_00001gog

1GOH | pdb_00001goh

1LVN | pdb_00001lvn

1MBD | pdb_00001mbd

1MBO | pdb_00001mbo

1MUP | pdb_00001mup

1QY0 | pdb_00001qy0

1QY1 | pdb_00001qy1

1QY2 | pdb_00001qy2

1T2X | pdb_00001t2x

1YP6 | pdb_00001yp6

1YP7 | pdb_00001yp7

1ZSE | pdb_00001zse

2A2G | pdb_00002a2g

2A2U | pdb_00002a2u

2B2D | pdb_00002b2d

2B2E | pdb_00002b2e

2B2G | pdb_00002b2g

2BNY | pdb_00002bny

2BQ5 | pdb_00002bq5