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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Pierce, R.J."

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Search Summary

This query matches 35 Structures.

Refinements

Structure Determination Methodology

experimental (35)

Scientific Name of Source Organism

	Schistosoma mansoni (29)
	Homo sapiens (2)
	Schistosoma haematobium (2)
	Trypanosoma cruzi (2)
	Biomphalaria glabrata (1)

Taxonomy

	Eukaryota (35)
	Eukaryota (eukaryotes) (1)

Experimental Method

X-RAY DIFFRACTION (35)

Polymer Entity Type

Protein (35)

Refinement Resolution (Å)

	1.5 - 2.0 (21)
	2.0 - 2.5 (12)
	2.5 - 3.0 (2)

Release Date

	2000 - 2004 (2)
	2005 - 2009 (1)
	2010 - 2014 (6)
	2015 - 2019 (24)
	2020 - 2024 (2)

Enzyme Classification Name

	Hydrolases (30)
	Transferases (3)

Symmetry Type

	Asymmetric (28)
	Cyclic (7)

SCOP Classification

	All alpha proteins (3)
	Alpha and beta proteins (a/b) (3)

AllSelected

1 to 25 of 35 Structures

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1OE7 \| pdb_00001oe7	Download File View File

28kDa glutathione S-transferase from Schistosoma haematobium

Johnson, K.A., Angelucci, F., Tsernoglou, D.

(2003) Biochemistry 42: 10084

Released	2003-07-25
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Schistosoma haematobium
Macromolecule	GLUTATHIONE S-TRANSFERASE (protein)
Unique Ligands	GSH

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1OE8 \| pdb_00001oe8	Download File View File

28kDa glutathione S-transferase from Schistosoma haematobium (glutathione saturated)

Johnson, K.A., Angelucci, F., Tsernoglou, D.

(2003) Biochemistry 42: 10084

Released	2003-07-25
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Schistosoma haematobium
Macromolecule	GLUTATHIONE S-TRANSFERASE (protein)
Unique Ligands	GSH

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1XIU \| pdb_00001xiu	Download File View File

Crystal structure of the agonist-bound ligand-binding domain of Biomphalaria glabrata RXR

De Groot, A., De Rosny, E., Juillan-Binard, C., Ferrer, J.-L., Laudet, V., Pebay-Peroula, E., Fontecilla-Camps, J.-C., Borel, F.

(2005) J Mol Biology 354: 841-853

Released	2005-09-13
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Biomphalaria glabrata Homo sapiens
Macromolecule	Nuclear receptor coactivator 1 (protein) RXR-like protein (protein)
Unique Ligands	9CR

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4BZ5 \| pdb_00004bz5	Download File View File

Crystal structure of Schistosoma mansoni HDAC8

Marek, M., Romier, C.

(2013) PLoS Pathog 9: 03645

Released	2013-08-14
Method	X-RAY DIFFRACTION 1.785 Å
Organisms	Schistosoma mansoni
Macromolecule	HISTONE DEACETYLASE 8 (protein)
Unique Ligands	K, TLA, ZN

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4BZ6 \| pdb_00004bz6	Download File View File

Crystal structure of Schistosoma mansoni HDAC8 complexed with SAHA

Marek, M., Romier, C.

(2013) PLoS Pathog 9: 03645

Released	2013-08-14
Method	X-RAY DIFFRACTION 2 Å
Organisms	Schistosoma mansoni
Macromolecule	HISTONE DEACETYLASE 8 (protein)
Unique Ligands	DMF, GOL, K, SHH, ZN

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4BZ7 \| pdb_00004bz7	Download File View File

Crystal structure of Schistosoma mansoni HDAC8 complexed with M344

Marek, M., Romier, C.

(2013) PLoS Pathog 9: 03645

Released	2013-08-14
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Schistosoma mansoni
Macromolecule	HISTONE DEACETYLASE 8 (protein)
Unique Ligands	B3N, GOL, K, ZN

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4BZ8 \| pdb_00004bz8	Download File View File

Crystal structure of Schistosoma mansoni HDAC8 complexed with J1038

Marek, M., Romier, C.

(2013) PLoS Pathog 9: 03645

Released	2013-08-14
Method	X-RAY DIFFRACTION 2.21 Å
Organisms	Schistosoma mansoni
Macromolecule	HISTONE DEACETYLASE 8 (protein)
Unique Ligands	J38, K, ZN

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4BZ9 \| pdb_00004bz9	Download File View File

Crystal structure of Schistosoma mansoni HDAC8 complexed with J1075

Marek, M., Romier, C.

(2013) PLoS Pathog 9: 03645

Released	2013-08-14
Method	X-RAY DIFFRACTION 2 Å
Organisms	Schistosoma mansoni
Macromolecule	HISTONE DEACETYLASE 8 (protein)
Unique Ligands	DMF, GOL, K, KMY, ZN

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4CQF \| pdb_00004cqf	Download File View File

Crystal structure of Schistosoma mansoni HDAC8 complexed with a mercaptoacetamide inhibitor

Marek, M., Romier, C.

(2014) J Mol Biology 426: 3442

Released	2014-04-02
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Schistosoma mansoni
Macromolecule	HISTONE DEACETYLASE 8 (protein)
Unique Ligands	9Z8, DMF, GOL, K, ZN

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5FUE \| pdb_00005fue	Download File View File

Crystal structure of Schistosoma mansoni HDAC8 complexed with 3- benzamido-benzohydroxamate

Marek, M., Romier, C.

(2016) J Med Chem 59: 2423

Released	2016-03-09
Method	X-RAY DIFFRACTION 2.199 Å
Organisms	Schistosoma mansoni
Macromolecule	HISTONE DEACETYLASE 8 (protein)
Unique Ligands	DMF, GOL, K, UV4, ZN

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6FU1 \| pdb_00006fu1	Download File View File

Crystal structure of Schistosoma mansoni HDAC8 complexed with a n-alkyl hydroxamate

Marek, M., Shaik, T.B., Romier, C.

(2018) Molecules 23:

Released	2019-03-13
Method	X-RAY DIFFRACTION 1.548 Å
Organisms	Schistosoma mansoni
Macromolecule	Histone deacetylase (protein)
Unique Ligands	E7Q, GOL, K, ZN

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6GX3 \| pdb_00006gx3	Download File View File

Crystal structure of Schistosoma mansoni HDAC8 complexed with an hydroxamate 1

Shaik, T.B., Marek, M., Romier, C.

(2018) ChemMedChem 13: 1517-1529

Released	2018-08-15
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Schistosoma mansoni
Macromolecule	Histone deacetylase (protein)
Unique Ligands	DMF, FF2, GOL, K, ZN

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6GXA \| pdb_00006gxa	Download File View File

Crystal structure of Schistosoma mansoni HDAC8 complexed with an hydroxamate 2

Shaik, T.B., Marek, M., Romier, C.

(2018) ChemMedChem 13: 1517-1529

Released	2018-08-15
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Schistosoma mansoni
Macromolecule	Histone deacetylase (protein)
Unique Ligands	DMF, GOL, K, TB8, ZN

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6GXU \| pdb_00006gxu	Download File View File

Crystal structure of Schistosoma mansoni HDAC8 complexed with an hydroxamate 3

Shaik, T.B., Marek, M., Romier, C.

(2018) ChemMedChem 13: 1517-1529

Released	2018-08-15
Method	X-RAY DIFFRACTION 1.917 Å
Organisms	Schistosoma mansoni
Macromolecule	Histone deacetylase (protein)
Unique Ligands	DMF, FG8, GOL, K, ZN

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6GXW \| pdb_00006gxw	Download File View File

Crystal structure of Schistosoma mansoni HDAC8 complexed with an hydroxamate 4

Shaik, T.B., Marek, M., Romier, C.

(2018) ChemMedChem 13: 1517-1529

Released	2018-08-15
Method	X-RAY DIFFRACTION 2.071 Å
Organisms	Schistosoma mansoni
Macromolecule	Histone deacetylase (protein)
Unique Ligands	DMF, FGN, GOL, K, ZN

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6HQY \| pdb_00006hqy	Download File View File

Crystal structure of Schistosoma mansoni HDAC8 complexed with PCI-34051

Marek, M., Shaik, T.B., Romier, C.

(2018) J Med Chem 61: 10000-10016

Released	2018-10-31
Method	X-RAY DIFFRACTION 2.501 Å
Organisms	Schistosoma mansoni
Macromolecule	Histone deacetylase (protein)
Unique Ligands	GKW, GOL, K, ZN

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6HRQ \| pdb_00006hrq	Download File View File

Crystal structure of Schistosoma mansoni HDAC8 complexed with NCC-149

Shaik, T.B., Marek, M., Romier, C.

(2018) J Med Chem 61: 10000-10016

Released	2018-10-31
Method	X-RAY DIFFRACTION 1.845 Å
Organisms	Schistosoma mansoni
Macromolecule	Histone deacetylase (protein)
Unique Ligands	DMF, GM5, GOL, K, ZN

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6HSF \| pdb_00006hsf	Download File View File

Crystal structure of Schistosoma mansoni HDAC8 mutant H292M complexed with PCI-34051

Shaik, T.B., Marek, M., Romier, C.

(2018) J Med Chem 61: 10000-10016

Released	2018-10-31
Method	X-RAY DIFFRACTION 1.899 Å
Organisms	Schistosoma mansoni
Macromolecule	Histone deacetylase (protein)
Unique Ligands	DMF, GKW, GOL, K, ZN

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6HSG \| pdb_00006hsg	Download File View File

Crystal structure of Schistosoma mansoni HDAC8 H292M mutant complexed with NCC-149

Shaik, T.B., Marek, M., Romier, C.

(2018) J Med Chem 61: 10000-10016

Released	2018-10-31
Method	X-RAY DIFFRACTION 1.846 Å
Organisms	Schistosoma mansoni
Macromolecule	Histone deacetylase (protein)
Unique Ligands	DMF, GM5, GOL, K, ZN

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6HSH \| pdb_00006hsh	Download File View File

Crystal structure of Schistosoma mansoni HDAC8 complexed with Quisinostat

Shaik, T.B., Marek, M., Romier, C.

(2018) J Med Chem 61: 10000-10016

Released	2018-10-31
Method	X-RAY DIFFRACTION 1.545 Å
Organisms	Schistosoma mansoni
Macromolecule	Histone deacetylase (protein)
Unique Ligands	DMF, GOK, GOL, K, ZN

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6HSK \| pdb_00006hsk	Download File View File

Crystal structure of a human HDAC8 L6 loop mutant complexed with Quisinostat

Marek, M., Shaik, T.B., Ramos-Morales, E., Romier, C.

(2018) J Med Chem 61: 10000-10016

Released	2018-10-31
Method	X-RAY DIFFRACTION 2.096 Å
Organisms	Homo sapiens
Macromolecule	Histone deacetylase 8 (protein)
Unique Ligands	GOK, K, ZN

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6HSZ \| pdb_00006hsz	Download File View File

Crystal structure of Schistosoma mansoni HDAC8 complexed with a benzohydroxamate inhibitor 2

Marek, M., Shaik, T.B., Romier, C.

(2018) J Med Chem 61: 10000-10016

Released	2018-10-31
Method	X-RAY DIFFRACTION 2.374 Å
Organisms	Schistosoma mansoni
Macromolecule	Histone deacetylase (protein)
Unique Ligands	GOL, GOW, K, ZN

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6HT8 \| pdb_00006ht8	Download File View File

Crystal structure of Schistosoma mansoni HDAC8 complexed with a benzohydroxamate inhibitor 3

Marek, M., Shaik, T.B., Romier, C.

(2018) J Med Chem 61: 10000-10016

Released	2018-10-31
Method	X-RAY DIFFRACTION 2.497 Å
Organisms	Schistosoma mansoni
Macromolecule	Histone deacetylase (protein)
Unique Ligands	DMF, GOL, GQE, K, ZN

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6HTG \| pdb_00006htg	Download File View File

Crystal structure of Schistosoma mansoni HDAC8 complexed with a benzohydroxamate inhibitor 4

Shaik, T.B., Marek, M., Romier, C.

(2018) J Med Chem 61: 10000-10016

Released	2018-10-31
Method	X-RAY DIFFRACTION 1.939 Å
Organisms	Schistosoma mansoni
Macromolecule	Histone deacetylase (protein)
Unique Ligands	DMF, GOL, K, T61, ZN

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6HTH \| pdb_00006hth	Download File View File

Crystal structure of Schistosoma mansoni HDAC8 complexed with a benzohydroxamate inhibitor 5

Shaik, T.B., Marek, M., Romier, C.

(2018) J Med Chem 61: 10000-10016

Released	2018-10-31
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Schistosoma mansoni
Macromolecule	Histone deacetylase (protein)
Unique Ligands	DMF, GOL, GQN, K, ZN

1 to 25 of 35 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1OE7 | pdb_00001oe7

1OE8 | pdb_00001oe8

1XIU | pdb_00001xiu

4BZ5 | pdb_00004bz5

4BZ6 | pdb_00004bz6

4BZ7 | pdb_00004bz7

4BZ8 | pdb_00004bz8

4BZ9 | pdb_00004bz9

4CQF | pdb_00004cqf

5FUE | pdb_00005fue

6FU1 | pdb_00006fu1

6GX3 | pdb_00006gx3

6GXA | pdb_00006gxa

6GXU | pdb_00006gxu

6GXW | pdb_00006gxw

6HQY | pdb_00006hqy

6HRQ | pdb_00006hrq

6HSF | pdb_00006hsf

6HSG | pdb_00006hsg

6HSH | pdb_00006hsh

6HSK | pdb_00006hsk

6HSZ | pdb_00006hsz

6HT8 | pdb_00006ht8

6HTG | pdb_00006htg

6HTH | pdb_00006hth